RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 AMOTQ4VCS5 1084 aa16.97■□□□□ 0.31
SMPD4-204ENST00000430682 DCAF5Q96JK2 942 aa16.97■□□□□ 0.31
SMPD4-204ENST00000430682 ZNF831Q5JPB2 1677 aa16.97■□□□□ 0.31
SMPD4-204ENST00000430682 SLC16A10Q8TF71 515 aa16.96■□□□□ 0.31
SMPD4-204ENST00000430682 SYT17Q9BSW7 474 aa16.96■□□□□ 0.31
SMPD4-204ENST00000430682 ADAMTS7Q9UKP4 1686 aa16.96■□□□□ 0.31
SMPD4-204ENST00000430682 ARXQ96QS3 562 aa16.95■□□□□ 0.3
SMPD4-204ENST00000430682 LGR6Q9HBX8 967 aa16.95■□□□□ 0.3
SMPD4-204ENST00000430682 TJP1Q07157 1748 aa16.94■□□□□ 0.3
SMPD4-204ENST00000430682 HSP90AB1P08238 724 aaKnown RBP16.93■□□□□ 0.3
SMPD4-204ENST00000430682 ATP6V1AP38606 617 aa16.93■□□□□ 0.3
SMPD4-204ENST00000430682 CABP4P57796 275 aa16.93■□□□□ 0.3
SMPD4-204ENST00000430682 MTHFSDQ2M296 383 aaKnown RBP16.93■□□□□ 0.3
SMPD4-204ENST00000430682 MSL1Q68DK7 614 aa16.93■□□□□ 0.3
SMPD4-204ENST00000430682 NFATC2IPQ8NCF5 419 aa16.93■□□□□ 0.3
SMPD4-204ENST00000430682 MSH5O43196 834 aa16.92■□□□□ 0.3
SMPD4-204ENST00000430682 PPP2R1AP30153 589 aa16.92■□□□□ 0.3
SMPD4-204ENST00000430682 C1orf141Q5JVX7 400 aa16.92■□□□□ 0.3
SMPD4-204ENST00000430682 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
SMPD4-204ENST00000430682 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
SMPD4-204ENST00000430682 SIPA1L3O60292 1781 aaPredicted RBP16.9■□□□□ 0.3
SMPD4-204ENST00000430682 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.9■□□□□ 0.3
SMPD4-204ENST00000430682 U2SURPO15042 1029 aaKnown RBP16.9■□□□□ 0.3
SMPD4-204ENST00000430682 PHF14O94880 888 aa16.9■□□□□ 0.3
SMPD4-204ENST00000430682 AK7Q96M32 723 aa16.9■□□□□ 0.3
SMPD4-204ENST00000430682 MAP3K5Q99683 1374 aa16.89■□□□□ 0.3
SMPD4-204ENST00000430682 CICQ96RK0 1608 aaPredicted RBP16.89■□□□□ 0.29
SMPD4-204ENST00000430682 MRC1P22897 1456 aa16.89■□□□□ 0.29
SMPD4-204ENST00000430682 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
SMPD4-204ENST00000430682 C4AP0C0L4 1744 aa16.89■□□□□ 0.29
SMPD4-204ENST00000430682 PTCD1O75127 700 aaKnown RBP16.88■□□□□ 0.29
SMPD4-204ENST00000430682 NLGN2Q8NFZ4 835 aa16.88■□□□□ 0.29
SMPD4-204ENST00000430682 UBR2Q8IWV8 1755 aa16.87■□□□□ 0.29
SMPD4-204ENST00000430682 GNPATO15228 680 aa16.87■□□□□ 0.29
SMPD4-204ENST00000430682 POLD1P28340 1107 aa16.87■□□□□ 0.29
SMPD4-204ENST00000430682 PHACTR3Q96KR7 559 aa16.87■□□□□ 0.29
SMPD4-204ENST00000430682 SLC52A2Q9HAB3 445 aa16.87■□□□□ 0.29
SMPD4-204ENST00000430682 CHD4Q14839 1912 aa16.87■□□□□ 0.29
SMPD4-204ENST00000430682 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
SMPD4-204ENST00000430682 KLHL34Q8N239 644 aa16.86■□□□□ 0.29
SMPD4-204ENST00000430682 FLAD1Q8NFF5 587 aa16.86■□□□□ 0.29
SMPD4-204ENST00000430682 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
SMPD4-204ENST00000430682 KCPQ6ZWJ8 1503 aa16.86■□□□□ 0.29
SMPD4-204ENST00000430682 SSFA2P28290 1259 aa16.85■□□□□ 0.29
SMPD4-204ENST00000430682 DLG5Q8TDM6 1919 aa16.85■□□□□ 0.29
SMPD4-204ENST00000430682 IL17REQ8NFR9 667 aa16.84■□□□□ 0.29
SMPD4-204ENST00000430682 PRKAR2BP31323 418 aa16.83■□□□□ 0.28
SMPD4-204ENST00000430682 RC3H1Q5TC82 1133 aaKnown RBP16.83■□□□□ 0.28
SMPD4-204ENST00000430682 CNTNAP4Q9C0A0 1308 aa16.82■□□□□ 0.28
SMPD4-204ENST00000430682 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
SMPD4-204ENST00000430682 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
SMPD4-204ENST00000430682 HMGB2P26583 209 aaKnown RBP16.81■□□□□ 0.28
SMPD4-204ENST00000430682 CRKLP46109 303 aaKnown RBP16.81■□□□□ 0.28
SMPD4-204ENST00000430682 DNAJC10Q8IXB1 793 aa16.81■□□□□ 0.28
SMPD4-204ENST00000430682 ARHGEF1Q92888 912 aaKnown RBP16.81■□□□□ 0.28
SMPD4-204ENST00000430682 KIAA1551Q9HCM1 1747 aa16.81■□□□□ 0.28
SMPD4-204ENST00000430682 INTS5Q6P9B9 1019 aaKnown RBP16.8■□□□□ 0.28
SMPD4-204ENST00000430682 RTCBQ9Y3I0 505 aaKnown RBP16.8■□□□□ 0.28
SMPD4-204ENST00000430682 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
SMPD4-204ENST00000430682 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
SMPD4-204ENST00000430682 U2AF1L5P0DN76 240 aaPredicted RBP16.79■□□□□ 0.28
SMPD4-204ENST00000430682 U2AF1Q01081 240 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMPD4-204ENST00000430682 DDX10Q13206 875 aaKnown RBP16.79■□□□□ 0.28
SMPD4-204ENST00000430682 TRAPPC3LQ5T215 181 aa16.79■□□□□ 0.28
SMPD4-204ENST00000430682 YY1P25490 414 aa16.78■□□□□ 0.28
SMPD4-204ENST00000430682 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
SMPD4-204ENST00000430682 N4BP2Q86UW6 1770 aaPredicted RBP16.78■□□□□ 0.28
SMPD4-204ENST00000430682 CEMIPQ8WUJ3 1361 aa16.77■□□□□ 0.28
SMPD4-204ENST00000430682 DCAF8L1A6NGE4 600 aa16.77■□□□□ 0.28
SMPD4-204ENST00000430682 CYP19A1P11511 503 aaPredicted RBP16.77■□□□□ 0.28
SMPD4-204ENST00000430682 GYS1P13807 737 aa16.77■□□□□ 0.28
SMPD4-204ENST00000430682 YBX3P16989 372 aaKnown RBP eCLIP16.77■□□□□ 0.284e-12■■□□□ 11.6
SMPD4-204ENST00000430682 SRP68Q9UHB9 627 aaKnown RBP16.77■□□□□ 0.28
SMPD4-204ENST00000430682 NUDCQ9Y266 331 aa16.77■□□□□ 0.28
SMPD4-204ENST00000430682 KCNQ3O43525 872 aa16.76■□□□□ 0.27
SMPD4-204ENST00000430682 FCHSD2O94868 740 aa16.75■□□□□ 0.27
SMPD4-204ENST00000430682 MMP10P09238 476 aa16.75■□□□□ 0.27
SMPD4-204ENST00000430682 CD2APQ9Y5K6 639 aa16.75■□□□□ 0.27
SMPD4-204ENST00000430682 ADRA2BP18089 450 aa16.74■□□□□ 0.27
SMPD4-204ENST00000430682 DCTN1Q14203 1278 aa16.74■□□□□ 0.27
SMPD4-204ENST00000430682 GPR162Q16538 588 aa16.74■□□□□ 0.27
SMPD4-204ENST00000430682 PELP1Q8IZL8 1130 aaKnown RBP16.74■□□□□ 0.27
SMPD4-204ENST00000430682 ZNF496Q96IT1 587 aaPredicted RBP16.74■□□□□ 0.27
SMPD4-204ENST00000430682 CCDC87Q9NVE4 849 aa16.74■□□□□ 0.27
SMPD4-204ENST00000430682 AFDNP55196 1824 aaKnown RBP16.74■□□□□ 0.27
SMPD4-204ENST00000430682 RFC4P35249 363 aa16.73■□□□□ 0.27
SMPD4-204ENST00000430682 TEFQ10587 303 aa16.73■□□□□ 0.27
SMPD4-204ENST00000430682 MCM10Q7L590 875 aa16.73■□□□□ 0.27
SMPD4-204ENST00000430682 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
SMPD4-204ENST00000430682 BRCA1P38398 1863 aaKnown RBP16.73■□□□□ 0.27
SMPD4-204ENST00000430682 SOS1Q07889 1333 aaPredicted RBP16.72■□□□□ 0.27
SMPD4-204ENST00000430682 USP42Q9H9J4 1324 aaKnown RBP16.72■□□□□ 0.27
SMPD4-204ENST00000430682 FKBP8Q14318 412 aa16.72■□□□□ 0.27
SMPD4-204ENST00000430682 ZNF790Q6PG37 636 aa16.72■□□□□ 0.27
SMPD4-204ENST00000430682 PLEKHF1Q96S99 279 aa16.72■□□□□ 0.27
SMPD4-204ENST00000430682 WWC3Q9ULE0 1092 aa16.72■□□□□ 0.27
SMPD4-204ENST00000430682 VSIG10Q8N0Z9 540 aa16.71■□□□□ 0.27
SMPD4-204ENST00000430682 NLGN1Q8N2Q7 840 aa16.71■□□□□ 0.27
SMPD4-204ENST00000430682 HEG1Q9ULI3 1381 aa16.71■□□□□ 0.27
SMPD4-204ENST00000430682 DDR1Q08345 913 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms