RNA–Protein interactions for RNA: ENST00000430454.5

HDAC9-211, Transcript of histone deacetylase 9, humanhuman

TSL 4

Gene HDAC9, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-211ENST00000430454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.45
HDAC9-211ENST00000430454 GPR162Q16538 588 aa12.27□□□□□ -0.45
HDAC9-211ENST00000430454 RBM42Q9BTD8 480 aaKnown RBP12.27□□□□□ -0.45
HDAC9-211ENST00000430454 NUDCQ9Y266 331 aa12.27□□□□□ -0.45
HDAC9-211ENST00000430454 TOGARAM1Q9Y4F4 1720 aa12.26□□□□□ -0.45
HDAC9-211ENST00000430454 GNPATO15228 680 aa12.26□□□□□ -0.45
HDAC9-211ENST00000430454 RTCBQ9Y3I0 505 aaKnown RBP12.26□□□□□ -0.45
HDAC9-211ENST00000430454 C4BP0C0L5 1744 aa12.25□□□□□ -0.45
HDAC9-211ENST00000430454 U2SURPO15042 1029 aaKnown RBP12.25□□□□□ -0.45
HDAC9-211ENST00000430454 PHF14O94880 888 aa12.25□□□□□ -0.45
HDAC9-211ENST00000430454 ADRA2BP18089 450 aa12.25□□□□□ -0.45
HDAC9-211ENST00000430454 CNGB1Q14028 1251 aaPredicted RBP12.25□□□□□ -0.45
HDAC9-211ENST00000430454 TRAPPC3LQ5T215 181 aa12.25□□□□□ -0.45
HDAC9-211ENST00000430454 RC3H1Q5TC82 1133 aaKnown RBP12.25□□□□□ -0.45
HDAC9-211ENST00000430454 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
HDAC9-211ENST00000430454 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
HDAC9-211ENST00000430454 CD2APQ9Y5K6 639 aa12.25□□□□□ -0.45
HDAC9-211ENST00000430454 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
HDAC9-211ENST00000430454 HMOX1P09601 288 aa12.24□□□□□ -0.45
HDAC9-211ENST00000430454 GAS2L2Q8NHY3 880 aa12.24□□□□□ -0.45
HDAC9-211ENST00000430454 CNTNAP4Q9C0A0 1308 aa12.23□□□□□ -0.45
HDAC9-211ENST00000430454 RFC4P35249 363 aa12.23□□□□□ -0.45
HDAC9-211ENST00000430454 ITPK1Q13572 414 aa12.23□□□□□ -0.45
HDAC9-211ENST00000430454 MSL1Q68DK7 614 aa12.23□□□□□ -0.45
HDAC9-211ENST00000430454 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
HDAC9-211ENST00000430454 NLGN1Q8N2Q7 840 aa12.23□□□□□ -0.45
HDAC9-211ENST00000430454 TAF1LQ8IZX4 1826 aa12.23□□□□□ -0.45
HDAC9-211ENST00000430454 KDM6AO15550 1401 aaPredicted RBP12.22□□□□□ -0.45
HDAC9-211ENST00000430454 SLC52A2Q9HAB3 445 aa12.22□□□□□ -0.45
HDAC9-211ENST00000430454 TUBGCP6Q96RT7 1819 aa12.21□□□□□ -0.45
HDAC9-211ENST00000430454 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.45
HDAC9-211ENST00000430454 PTCD1O75127 700 aaKnown RBP12.21□□□□□ -0.45
HDAC9-211ENST00000430454 RPS6KA4O75676 772 aa12.21□□□□□ -0.45
HDAC9-211ENST00000430454 NEFMP07197 916 aa12.21□□□□□ -0.45
HDAC9-211ENST00000430454 ZNF831Q5JPB2 1677 aa12.21□□□□□ -0.45
HDAC9-211ENST00000430454 GNAT3A8MTJ3 354 aa12.2□□□□□ -0.46
HDAC9-211ENST00000430454 RNMTO43148 476 aaKnown RBP12.2□□□□□ -0.46
HDAC9-211ENST00000430454 TEFQ10587 303 aa12.2□□□□□ -0.46
HDAC9-211ENST00000430454 MTHFSDQ2M296 383 aaKnown RBP12.2□□□□□ -0.46
HDAC9-211ENST00000430454 TTC5Q8N0Z6 440 aa12.2□□□□□ -0.46
HDAC9-211ENST00000430454 PPP2R1AP30153 589 aa12.18□□□□□ -0.46
HDAC9-211ENST00000430454 VSIG10Q8N0Z9 540 aa12.18□□□□□ -0.46
HDAC9-211ENST00000430454 TEX13AQ9BXU3 409 aaPredicted RBP12.18□□□□□ -0.46
HDAC9-211ENST00000430454 UBR3Q6ZT12 1888 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 FCHSD2O94868 740 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 STARD3NLO95772 234 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 MMP10P09238 476 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 U2AF1L5P0DN76 240 aaPredicted RBP12.17□□□□□ -0.46
HDAC9-211ENST00000430454 CRKLP46109 303 aaKnown RBP12.17□□□□□ -0.46
HDAC9-211ENST00000430454 U2AF1Q01081 240 aaKnown RBP eCLIP12.17□□□□□ -0.46
HDAC9-211ENST00000430454 NPM2Q86SE8 214 aaKnown RBP12.17□□□□□ -0.46
HDAC9-211ENST00000430454 NLGN2Q8NFZ4 835 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 RTF1Q92541 710 aaKnown RBP12.17□□□□□ -0.46
HDAC9-211ENST00000430454 ARHGEF1Q92888 912 aaKnown RBP12.17□□□□□ -0.46
HDAC9-211ENST00000430454 SLC4A9Q96Q91 983 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 PNNQ9H307 717 aaKnown RBP12.17□□□□□ -0.46
HDAC9-211ENST00000430454 LGR6Q9HBX8 967 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 CCDC87Q9NVE4 849 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 PARP3Q9Y6F1 533 aa12.17□□□□□ -0.46
HDAC9-211ENST00000430454 SCN11AQ9UI33 1791 aa12.16□□□□□ -0.46
HDAC9-211ENST00000430454 ZPR1O75312 459 aa12.16□□□□□ -0.46
HDAC9-211ENST00000430454 COL3A1P02461 1466 aaPredicted RBP12.15□□□□□ -0.46
HDAC9-211ENST00000430454 PRKAR2BP31323 418 aa12.15□□□□□ -0.46
HDAC9-211ENST00000430454 AMIGO3Q86WK7 504 aa12.15□□□□□ -0.46
HDAC9-211ENST00000430454 MRC1P22897 1456 aa12.14□□□□□ -0.47
HDAC9-211ENST00000430454 A0A087WZG4 1122 aa12.14□□□□□ -0.47
HDAC9-211ENST00000430454 TGFB2P61812 414 aa12.14□□□□□ -0.47
HDAC9-211ENST00000430454 HTATSF1O43719 755 aaKnown RBP12.13□□□□□ -0.47
HDAC9-211ENST00000430454 GYS1P13807 737 aa12.13□□□□□ -0.47
HDAC9-211ENST00000430454 SLC39A6Q13433 755 aa12.13□□□□□ -0.47
HDAC9-211ENST00000430454 SMIM5Q71RC9 77 aa12.13□□□□□ -0.47
HDAC9-211ENST00000430454 DNAJC10Q8IXB1 793 aa12.13□□□□□ -0.47
HDAC9-211ENST00000430454 FMNL2Q96PY5 1086 aa12.13□□□□□ -0.47
HDAC9-211ENST00000430454 RSPH6AQ9H0K4 717 aa12.13□□□□□ -0.47
HDAC9-211ENST00000430454 COL5A3P25940 1745 aaPredicted RBP12.12□□□□□ -0.47
HDAC9-211ENST00000430454 CYP19A1P11511 503 aaPredicted RBP12.12□□□□□ -0.47
HDAC9-211ENST00000430454 RALBP1Q15311 655 aa12.12□□□□□ -0.47
HDAC9-211ENST00000430454 INTS5Q6P9B9 1019 aaKnown RBP12.12□□□□□ -0.47
HDAC9-211ENST00000430454 ZNF790Q6PG37 636 aa12.12□□□□□ -0.47
HDAC9-211ENST00000430454 ZNF784Q8NCA9 323 aaPredicted RBP12.12□□□□□ -0.47
HDAC9-211ENST00000430454 USP42Q9H9J4 1324 aaKnown RBP12.11□□□□□ -0.47
HDAC9-211ENST00000430454 CHD4Q14839 1912 aa12.11□□□□□ -0.47
HDAC9-211ENST00000430454 BTBD11A6QL63 1104 aa12.11□□□□□ -0.47
HDAC9-211ENST00000430454 YBX3P16989 372 aaKnown RBP eCLIP12.11□□□□□ -0.47
HDAC9-211ENST00000430454 IL17REQ8NFR9 667 aa12.11□□□□□ -0.47
HDAC9-211ENST00000430454 CICQ96RK0 1608 aaPredicted RBP12.11□□□□□ -0.47
HDAC9-211ENST00000430454 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
HDAC9-211ENST00000430454 PHACTR3Q96KR7 559 aa12.1□□□□□ -0.47
HDAC9-211ENST00000430454 NARFQ9UHQ1 456 aa12.1□□□□□ -0.47
HDAC9-211ENST00000430454 MAPK8IP3Q9UPT6 1336 aa12.1□□□□□ -0.47
HDAC9-211ENST00000430454 ADAMTS7Q9UKP4 1686 aa12.1□□□□□ -0.47
HDAC9-211ENST00000430454 CEMIPQ8WUJ3 1361 aa12.09□□□□□ -0.47
HDAC9-211ENST00000430454 HEG1Q9ULI3 1381 aa12.09□□□□□ -0.47
HDAC9-211ENST00000430454 PNISRQ8TF01 805 aaKnown RBP12.09□□□□□ -0.47
HDAC9-211ENST00000430454 COL15A1P39059 1388 aa12.08□□□□□ -0.48
HDAC9-211ENST00000430454 KCPQ6ZWJ8 1503 aa12.08□□□□□ -0.48
HDAC9-211ENST00000430454 CANXP27824 592 aaKnown RBP12.08□□□□□ -0.48
HDAC9-211ENST00000430454 FKBP8Q14318 412 aa12.08□□□□□ -0.48
HDAC9-211ENST00000430454 USPL1Q5W0Q7 1092 aa12.08□□□□□ -0.48
HDAC9-211ENST00000430454 SRP68Q9UHB9 627 aaKnown RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms