RNA–Protein interactions for RNA: ENST00000430350.2

PRNP-203, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,539 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-203ENST00000430350 ABCC4O15439 1325 aa18.8■□□□□ 0.6
PRNP-203ENST00000430350 WDR17Q8IZU2 1322 aa18.8■□□□□ 0.6
PRNP-203ENST00000430350 MEGF6O75095 1541 aa18.8■□□□□ 0.6
PRNP-203ENST00000430350 AHDC1Q5TGY3 1603 aaPredicted RBP18.8■□□□□ 0.6
PRNP-203ENST00000430350 COL5A2P05997 1499 aaPredicted RBP18.79■□□□□ 0.6
PRNP-203ENST00000430350 PTPRCP08575 1304 aa18.78■□□□□ 0.6
PRNP-203ENST00000430350 SLC4A2P04920 1241 aa18.78■□□□□ 0.6
PRNP-203ENST00000430350 CHMP4BQ9H444 224 aaKnown RBP18.78■□□□□ 0.6
PRNP-203ENST00000430350 NFKBIBQ15653 356 aa18.77■□□□□ 0.6
PRNP-203ENST00000430350 ZBTB40Q9NUA8 1239 aa18.77■□□□□ 0.6
PRNP-203ENST00000430350 ADAMTS7Q9UKP4 1686 aa18.77■□□□□ 0.6
PRNP-203ENST00000430350 BTBD11A6QL63 1104 aa18.77■□□□□ 0.6
PRNP-203ENST00000430350 TOM1L2Q6ZVM7 507 aa18.77■□□□□ 0.6
PRNP-203ENST00000430350 KDM3BQ7LBC6 1761 aa18.77■□□□□ 0.59
PRNP-203ENST00000430350 FAM161AQ3B820 660 aa18.76■□□□□ 0.59
PRNP-203ENST00000430350 CCDC30Q5VVM6 783 aa18.76■□□□□ 0.59
PRNP-203ENST00000430350 RWDD1Q9H446 243 aaPredicted RBP18.76■□□□□ 0.59
PRNP-203ENST00000430350 STK31Q9BXU1 1019 aa18.76■□□□□ 0.59
PRNP-203ENST00000430350 PHKG2P15735 406 aa18.75■□□□□ 0.59
PRNP-203ENST00000430350 EIF4A1P60842 406 aaKnown RBP18.75■□□□□ 0.59
PRNP-203ENST00000430350 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
PRNP-203ENST00000430350 ZBTB7BO15156 539 aaPredicted RBP18.74■□□□□ 0.59
PRNP-203ENST00000430350 PKD1L3Q7Z443 1732 aa18.74■□□□□ 0.59
PRNP-203ENST00000430350 RGS12O14924 1447 aa18.74■□□□□ 0.59
PRNP-203ENST00000430350 HOXB7P09629 217 aa18.74■□□□□ 0.59
PRNP-203ENST00000430350 CARD10Q9BWT7 1032 aa18.73■□□□□ 0.59
PRNP-203ENST00000430350 CHMP4AQ9BY43 222 aa18.73■□□□□ 0.59
PRNP-203ENST00000430350 COL22A1Q8NFW1 1626 aaPredicted RBP18.72■□□□□ 0.59
PRNP-203ENST00000430350 EVA1CP58658 441 aa18.72■□□□□ 0.59
PRNP-203ENST00000430350 INTS3Q68E01 1043 aaKnown RBP18.72■□□□□ 0.59
PRNP-203ENST00000430350 SIPA1L3O60292 1781 aaPredicted RBP18.72■□□□□ 0.59
PRNP-203ENST00000430350 HDAC1Q13547 482 aaPredicted RBP18.72■□□□□ 0.59
PRNP-203ENST00000430350 SKAP1Q86WV1 359 aa18.72■□□□□ 0.59
PRNP-203ENST00000430350 KDM6AO15550 1401 aaPredicted RBP18.72■□□□□ 0.59
PRNP-203ENST00000430350 STRN4Q9NRL3 753 aa18.71■□□□□ 0.59
PRNP-203ENST00000430350 PARP4Q9UKK3 1724 aaKnown RBP18.71■□□□□ 0.59
PRNP-203ENST00000430350 SCN11AQ9UI33 1791 aa18.71■□□□□ 0.59
PRNP-203ENST00000430350 CYP27B1O15528 508 aa18.71■□□□□ 0.59
PRNP-203ENST00000430350 KCNQ3O43525 872 aa18.71■□□□□ 0.59
PRNP-203ENST00000430350 HSP90AB1P08238 724 aaKnown RBP18.71■□□□□ 0.59
PRNP-203ENST00000430350 C8orf34Q49A92 452 aa18.71■□□□□ 0.59
PRNP-203ENST00000430350 HDGFL1Q5TGJ6 251 aa18.71■□□□□ 0.59
PRNP-203ENST00000430350 CACNA1FO60840 1977 aa18.71■□□□□ 0.59
PRNP-203ENST00000430350 TOM1O60784 492 aa18.7■□□□□ 0.58
PRNP-203ENST00000430350 LARP1Q6PKG0 1096 aaKnown RBP18.7■□□□□ 0.58
PRNP-203ENST00000430350 G2E3Q7L622 706 aa18.7■□□□□ 0.58
PRNP-203ENST00000430350 DCAF5Q96JK2 942 aa18.7■□□□□ 0.58
PRNP-203ENST00000430350 SLC52A2Q9HAB3 445 aa18.7■□□□□ 0.58
PRNP-203ENST00000430350 NECTIN2Q92692 538 aa18.69■□□□□ 0.58
PRNP-203ENST00000430350 DAXXQ9UER7 740 aaPredicted RBP18.69■□□□□ 0.58
PRNP-203ENST00000430350 IL2RBP14784 551 aa18.68■□□□□ 0.58
PRNP-203ENST00000430350 FLIIQ13045 1269 aa18.68■□□□□ 0.58
PRNP-203ENST00000430350 ZCRB1Q8TBF4 217 aaKnown RBP18.68■□□□□ 0.58
PRNP-203ENST00000430350 BTG4Q9NY30 223 aa18.68■□□□□ 0.58
PRNP-203ENST00000430350 PHLPP1O60346 1717 aa18.68■□□□□ 0.58
PRNP-203ENST00000430350 COL14A1Q05707 1796 aaKnown RBP18.68■□□□□ 0.58
PRNP-203ENST00000430350 PCDH11XQ9BZA7 1347 aa18.67■□□□□ 0.58
PRNP-203ENST00000430350 PCDH11YQ9BZA8 1340 aa18.67■□□□□ 0.58
PRNP-203ENST00000430350 HEG1Q9ULI3 1381 aa18.67■□□□□ 0.58
PRNP-203ENST00000430350 COL16A1Q07092 1604 aaPredicted RBP18.66■□□□□ 0.58
PRNP-203ENST00000430350 MRC1P22897 1456 aa18.66■□□□□ 0.58
PRNP-203ENST00000430350 EIF2S2P20042 333 aaKnown RBP18.66■□□□□ 0.58
PRNP-203ENST00000430350 NFATC2IPQ8NCF5 419 aa18.66■□□□□ 0.58
PRNP-203ENST00000430350 GIGYF1O75420 1035 aaPredicted RBP18.65■□□□□ 0.58
PRNP-203ENST00000430350 FKBP5Q13451 457 aaPredicted RBP18.65■□□□□ 0.58
PRNP-203ENST00000430350 RGS3P49796 1198 aa18.65■□□□□ 0.58
PRNP-203ENST00000430350 CCT4P50991 539 aaKnown RBP18.65■□□□□ 0.58
PRNP-203ENST00000430350 ZNF790Q6PG37 636 aa18.65■□□□□ 0.58
PRNP-203ENST00000430350 F6X3S4 739 aa18.64■□□□□ 0.57
PRNP-203ENST00000430350 FAM43AQ8N2R8 423 aa18.64■□□□□ 0.57
PRNP-203ENST00000430350 PIP4K2BP78356 416 aa18.63■□□□□ 0.57
PRNP-203ENST00000430350 SLC4A10Q6U841 1118 aa18.63■□□□□ 0.57
PRNP-203ENST00000430350 SMC5Q8IY18 1101 aa18.63■□□□□ 0.57
PRNP-203ENST00000430350 C1orf115Q9H7X2 142 aa18.63■□□□□ 0.57
PRNP-203ENST00000430350 PDZRN3Q9UPQ7 1066 aa18.63■□□□□ 0.57
PRNP-203ENST00000430350 CHPF2Q9P2E5 772 aa18.62■□□□□ 0.57
PRNP-203ENST00000430350 BRPF3Q9ULD4 1205 aa18.62■□□□□ 0.57
PRNP-203ENST00000430350 CABP4P57796 275 aa18.62■□□□□ 0.57
PRNP-203ENST00000430350 SLC39A6Q13433 755 aa18.61■□□□□ 0.57
PRNP-203ENST00000430350 NKX1-1Q15270 411 aaPredicted RBP18.61■□□□□ 0.57
PRNP-203ENST00000430350 PHAXQ9H814 394 aaKnown RBP18.61■□□□□ 0.57
PRNP-203ENST00000430350 DBF4Q9UBU7 674 aaPredicted RBP18.61■□□□□ 0.57
PRNP-203ENST00000430350 PXDNLA1KZ92 1463 aa18.6■□□□□ 0.57
PRNP-203ENST00000430350 RTN4Q9NQC3 1192 aaKnown RBP18.6■□□□□ 0.57
PRNP-203ENST00000430350 ERVV-2B6SEH9 535 aa18.59■□□□□ 0.57
PRNP-203ENST00000430350 TTC5Q8N0Z6 440 aa18.59■□□□□ 0.57
PRNP-203ENST00000430350 UBE2Q2Q8WVN8 375 aa18.59■□□□□ 0.57
PRNP-203ENST00000430350 UBAP1LF5GYI3 381 aa18.59■□□□□ 0.57
PRNP-203ENST00000430350 MEIS3Q99687 375 aa18.59■□□□□ 0.57
PRNP-203ENST00000430350 SHANK3Q9BYB0 1731 aa18.59■□□□□ 0.57
PRNP-203ENST00000430350 SIRT2Q8IXJ6 389 aa18.58■□□□□ 0.57
PRNP-203ENST00000430350 DDX54Q8TDD1 881 aaKnown RBP18.58■□□□□ 0.57
PRNP-203ENST00000430350 PRAMEF22A3QJZ6 481 aa18.58■□□□□ 0.56
PRNP-203ENST00000430350 GCC1Q96CN9 775 aa18.58■□□□□ 0.56
PRNP-203ENST00000430350 ZNF496Q96IT1 587 aaPredicted RBP18.57■□□□□ 0.56
PRNP-203ENST00000430350 RPAP2Q8IXW5 612 aaPredicted RBP18.57■□□□□ 0.56
PRNP-203ENST00000430350 N4BP2Q86UW6 1770 aaPredicted RBP18.56■□□□□ 0.56
PRNP-203ENST00000430350 ADAMTS2O95450 1211 aa18.56■□□□□ 0.56
PRNP-203ENST00000430350 FMNL2Q96PY5 1086 aa18.56■□□□□ 0.56
PRNP-203ENST00000430350 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms