RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 RASSF7Q02833 373 aa11.52□□□□□ -0.57
PTPRK-211ENST00000429595 LYPD4Q6UWN0 246 aa11.52□□□□□ -0.57
PTPRK-211ENST00000429595 TRIM52Q96A61 297 aa11.52□□□□□ -0.57
PTPRK-211ENST00000429595 WDR97A6NE52 1622 aa11.52□□□□□ -0.57
PTPRK-211ENST00000429595 ADGRL1O94910 1474 aa11.51□□□□□ -0.57
PTPRK-211ENST00000429595 ABCC10Q5T3U5 1492 aa11.51□□□□□ -0.57
PTPRK-211ENST00000429595 MCCD1P59942 119 aaPredicted RBP11.51□□□□□ -0.57
PTPRK-211ENST00000429595 POU4F2Q12837 409 aa11.51□□□□□ -0.57
PTPRK-211ENST00000429595 CLN3Q13286 438 aa11.51□□□□□ -0.57
PTPRK-211ENST00000429595 DBN1Q16643 649 aa11.51□□□□□ -0.57
PTPRK-211ENST00000429595 TRIM22Q8IYM9 498 aa11.51□□□□□ -0.57
PTPRK-211ENST00000429595 GPR25O00155 361 aa11.5□□□□□ -0.57
PTPRK-211ENST00000429595 SRSF11Q05519 484 aaKnown RBP11.5□□□□□ -0.57
PTPRK-211ENST00000429595 CYP2U1Q7Z449 544 aa11.5□□□□□ -0.57
PTPRK-211ENST00000429595 GRIP2Q9C0E4 1043 aa11.5□□□□□ -0.57
PTPRK-211ENST00000429595 ARHGEF10LQ9HCE6 1279 aa11.5□□□□□ -0.57
PTPRK-211ENST00000429595 TMEM151AQ8N4L1 468 aa11.49□□□□□ -0.57
PTPRK-211ENST00000429595 GDF11O95390 407 aa11.48□□□□□ -0.57
PTPRK-211ENST00000429595 NLRP3Q96P20 1036 aa11.48□□□□□ -0.57
PTPRK-211ENST00000429595 DYRK1BQ9Y463 629 aa11.48□□□□□ -0.57
PTPRK-211ENST00000429595 CCDC88BA6NC98 1476 aa11.48□□□□□ -0.57
PTPRK-211ENST00000429595 RNF225M0QZC1 329 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-211ENST00000429595 SLC27A3Q5K4L6 730 aa11.47□□□□□ -0.57
PTPRK-211ENST00000429595 NBPF10Q6P3W6 841 aaKnown RBP11.47□□□□□ -0.57
PTPRK-211ENST00000429595 RIPOR1Q6ZS17 1223 aa11.47□□□□□ -0.57
PTPRK-211ENST00000429595 NBPF15Q8N660 670 aa11.47□□□□□ -0.57
PTPRK-211ENST00000429595 RAB6BQ9NRW1 208 aa11.47□□□□□ -0.57
PTPRK-211ENST00000429595 ZNF330Q9Y3S2 320 aaPredicted RBP11.47□□□□□ -0.57
PTPRK-211ENST00000429595 DISP3Q9P2K9 1392 aa11.46□□□□□ -0.57
PTPRK-211ENST00000429595 SPATA31C2B4DYI2 1134 aa11.46□□□□□ -0.57
PTPRK-211ENST00000429595 CELA2BP08218 269 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-211ENST00000429595 GMCL1Q96IK5 515 aa11.46□□□□□ -0.57
PTPRK-211ENST00000429595 CCDC85AQ96PX6 553 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-211ENST00000429595 CDCA7Q9BWT1 371 aaPredicted RBP11.46□□□□□ -0.57
PTPRK-211ENST00000429595 ZNF592Q92610 1267 aa11.45□□□□□ -0.58
PTPRK-211ENST00000429595 GAS2L1Q99501 681 aaPredicted RBP11.45□□□□□ -0.58
PTPRK-211ENST00000429595 CEP170Q5SW79 1584 aa11.45□□□□□ -0.58
PTPRK-211ENST00000429595 IL2RAP01589 272 aa11.44□□□□□ -0.58
PTPRK-211ENST00000429595 GTPBP3Q969Y2 492 aaKnown RBP11.44□□□□□ -0.58
PTPRK-211ENST00000429595 MBIPQ9NS73 344 aa11.44□□□□□ -0.58
PTPRK-211ENST00000429595 CEP126Q9P2H0 1117 aa11.44□□□□□ -0.58
PTPRK-211ENST00000429595 IRS1P35568 1242 aa11.43□□□□□ -0.58
PTPRK-211ENST00000429595 ILDR2Q71H61 639 aa11.43□□□□□ -0.58
PTPRK-211ENST00000429595 TBC1D2BQ9UPU7 963 aa11.43□□□□□ -0.58
PTPRK-211ENST00000429595 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
PTPRK-211ENST00000429595 IGF1RP08069 1367 aa11.42□□□□□ -0.58
PTPRK-211ENST00000429595 HRH3Q9Y5N1 445 aa11.42□□□□□ -0.58
PTPRK-211ENST00000429595 TSPOAP1O95153 1857 aa11.42□□□□□ -0.58
PTPRK-211ENST00000429595 WASLO00401 505 aaPredicted RBP11.41□□□□□ -0.58
PTPRK-211ENST00000429595 THBS1P07996 1170 aa11.41□□□□□ -0.58
PTPRK-211ENST00000429595 MARSP56192 900 aaKnown RBP11.41□□□□□ -0.58
PTPRK-211ENST00000429595 WDR44Q5JSH3 913 aa11.41□□□□□ -0.58
PTPRK-211ENST00000429595 TAS1R3Q7RTX0 852 aa11.41□□□□□ -0.58
PTPRK-211ENST00000429595 CNKSR1Q969H4 720 aa11.41□□□□□ -0.58
PTPRK-211ENST00000429595 DIP2BQ9P265 1576 aa11.41□□□□□ -0.58
PTPRK-211ENST00000429595 APBB1O00213 710 aa11.4□□□□□ -0.58
PTPRK-211ENST00000429595 GNRH1P01148 92 aa11.4□□□□□ -0.58
PTPRK-211ENST00000429595 TSGA10IPQ3SY00 556 aa11.4□□□□□ -0.58
PTPRK-211ENST00000429595 ESYT1Q9BSJ8 1104 aa11.4□□□□□ -0.58
PTPRK-211ENST00000429595 TIMMDC1Q9NPL8 285 aa11.4□□□□□ -0.58
PTPRK-211ENST00000429595 LOC100996750A0A140TA64 210 aa11.39□□□□□ -0.59
PTPRK-211ENST00000429595 H7C1W4 665 aa11.39□□□□□ -0.59
PTPRK-211ENST00000429595 MAP3K10Q02779 954 aa11.39□□□□□ -0.59
PTPRK-211ENST00000429595 CENPCQ03188 943 aa11.39□□□□□ -0.59
PTPRK-211ENST00000429595 IRF5Q13568 498 aa11.39□□□□□ -0.59
PTPRK-211ENST00000429595 KRTAP4-6Q9BYQ5 205 aa11.39□□□□□ -0.59
PTPRK-211ENST00000429595 MAPKBP1O60336 1514 aa11.39□□□□□ -0.59
PTPRK-211ENST00000429595 PRG4Q92954 1404 aaPredicted RBP11.38□□□□□ -0.59
PTPRK-211ENST00000429595 FOXR1Q6PIV2 292 aa11.38□□□□□ -0.59
PTPRK-211ENST00000429595 ACDQ96AP0 544 aa11.38□□□□□ -0.59
PTPRK-211ENST00000429595 ESF1Q9H501 851 aaKnown RBP11.38□□□□□ -0.59
PTPRK-211ENST00000429595 GRIN2AQ12879 1464 aa11.38□□□□□ -0.59
PTPRK-211ENST00000429595 PBRM1Q86U86 1689 aa11.37□□□□□ -0.59
PTPRK-211ENST00000429595 F11P03951 625 aa11.37□□□□□ -0.59
PTPRK-211ENST00000429595 TPRNQ4KMQ1 711 aa11.37□□□□□ -0.59
PTPRK-211ENST00000429595 PHTF2Q8N3S3 785 aa11.37□□□□□ -0.59
PTPRK-211ENST00000429595 SCARF2Q96GP6 870 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-211ENST00000429595 FHDC1Q9C0D6 1143 aaPredicted RBP11.37□□□□□ -0.59
PTPRK-211ENST00000429595 STAU1O95793 577 aaKnown RBP11.36□□□□□ -0.59
PTPRK-211ENST00000429595 SUZ12Q15022 739 aaKnown RBP11.36□□□□□ -0.59
PTPRK-211ENST00000429595 XAGE2Q96GT9 111 aa11.36□□□□□ -0.59
PTPRK-211ENST00000429595 NUCKS1Q9H1E3 243 aaKnown RBP11.36□□□□□ -0.59
PTPRK-211ENST00000429595 DNMT3AQ9Y6K1 912 aaPredicted RBP11.36□□□□□ -0.59
PTPRK-211ENST00000429595 MYCP01106 439 aaPredicted RBP11.35□□□□□ -0.59
PTPRK-211ENST00000429595 PHKA2P46019 1235 aa11.35□□□□□ -0.59
PTPRK-211ENST00000429595 KANK3Q6NY19 840 aa11.35□□□□□ -0.59
PTPRK-211ENST00000429595 GPAMQ9HCL2 828 aa11.35□□□□□ -0.59
PTPRK-211ENST00000429595 TRERF1Q96PN7 1200 aa11.34□□□□□ -0.59
PTPRK-211ENST00000429595 ZSCAN10Q96SZ4 725 aaPredicted RBP11.34□□□□□ -0.59
PTPRK-211ENST00000429595 NUP160Q12769 1436 aa11.34□□□□□ -0.59
PTPRK-211ENST00000429595 BCRP11274 1271 aa11.33□□□□□ -0.6
PTPRK-211ENST00000429595 SHROOM2Q13796 1616 aa11.32□□□□□ -0.6
PTPRK-211ENST00000429595 MX2P20592 715 aa11.32□□□□□ -0.6
PTPRK-211ENST00000429595 UBAP2LQ14157 1087 aaKnown RBP11.32□□□□□ -0.6
PTPRK-211ENST00000429595 DOLKQ9UPQ8 538 aa11.32□□□□□ -0.6
PTPRK-211ENST00000429595 CNTNAP5Q8WYK1 1306 aa11.32□□□□□ -0.6
PTPRK-211ENST00000429595 C4orf17Q53FE4 359 aa11.31□□□□□ -0.6
PTPRK-211ENST00000429595 ETNK1Q9HBU6 452 aa11.31□□□□□ -0.6
PTPRK-211ENST00000429595 ENAMQ9NRM1 1142 aa11.31□□□□□ -0.6
PTPRK-211ENST00000429595 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms