RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 SBF1O95248 1867 aa16.44■□□□□ 0.22
ALMS1P1-201ENST00000428767 KIF20BQ96Q89 1820 aa16.43■□□□□ 0.22
ALMS1P1-201ENST00000428767 PLEKHG2Q9H7P9 1386 aa16.43■□□□□ 0.22
ALMS1P1-201ENST00000428767 DPEP1P16444 411 aa16.43■□□□□ 0.22
ALMS1P1-201ENST00000428767 FSTL1Q12841 308 aa16.43■□□□□ 0.22
ALMS1P1-201ENST00000428767 ITPK1Q13572 414 aa16.43■□□□□ 0.22
ALMS1P1-201ENST00000428767 CARD11Q9BXL7 1154 aa16.43■□□□□ 0.22
ALMS1P1-201ENST00000428767 TGFB2P61812 414 aa16.42■□□□□ 0.22
ALMS1P1-201ENST00000428767 ATP6V1AP38606 617 aa16.4■□□□□ 0.22
ALMS1P1-201ENST00000428767 HSP90AB2PQ58FF8 381 aa16.4■□□□□ 0.22
ALMS1P1-201ENST00000428767 GGNBP2Q9H3C7 697 aa16.4■□□□□ 0.22
ALMS1P1-201ENST00000428767 RRAGCQ9HB90 399 aa16.4■□□□□ 0.22
ALMS1P1-201ENST00000428767 HSPA1AP0DMV8 641 aaKnown RBP16.39■□□□□ 0.21
ALMS1P1-201ENST00000428767 HSPA1BP0DMV9 641 aaKnown RBP16.39■□□□□ 0.21
ALMS1P1-201ENST00000428767 CCDC87Q9NVE4 849 aa16.39■□□□□ 0.21
ALMS1P1-201ENST00000428767 RNF181Q9P0P0 153 aa16.39■□□□□ 0.21
ALMS1P1-201ENST00000428767 ASAP1Q9ULH1 1129 aa16.39■□□□□ 0.21
ALMS1P1-201ENST00000428767 KDM2BQ8NHM5 1336 aa16.39■□□□□ 0.21
ALMS1P1-201ENST00000428767 COL5A3P25940 1745 aaPredicted RBP16.39■□□□□ 0.21
ALMS1P1-201ENST00000428767 INSRP06213 1382 aa16.38■□□□□ 0.21
ALMS1P1-201ENST00000428767 TMOD3Q9NYL9 352 aa16.38■□□□□ 0.21
ALMS1P1-201ENST00000428767 TMF1P82094 1093 aa16.37■□□□□ 0.21
ALMS1P1-201ENST00000428767 FLT4P35916 1363 aa16.37■□□□□ 0.21
ALMS1P1-201ENST00000428767 MYH14Q7Z406 1995 aaKnown RBP16.37■□□□□ 0.21
ALMS1P1-201ENST00000428767 CCDC88AQ3V6T2 1871 aa16.36■□□□□ 0.21
ALMS1P1-201ENST00000428767 PARP3Q9Y6F1 533 aa16.36■□□□□ 0.21
ALMS1P1-201ENST00000428767 TRAPPC3LQ5T215 181 aa16.35■□□□□ 0.21
ALMS1P1-201ENST00000428767 NLGN1Q8N2Q7 840 aa16.35■□□□□ 0.21
ALMS1P1-201ENST00000428767 SMC1BQ8NDV3 1235 aa16.35■□□□□ 0.21
ALMS1P1-201ENST00000428767 RTCBQ9Y3I0 505 aaKnown RBP16.35■□□□□ 0.21
ALMS1P1-201ENST00000428767 FYB1O15117 783 aa16.34■□□□□ 0.21
ALMS1P1-201ENST00000428767 KCNA3P22001 575 aa16.34■□□□□ 0.21
ALMS1P1-201ENST00000428767 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
ALMS1P1-201ENST00000428767 PUS7Q96PZ0 661 aaKnown RBP16.34■□□□□ 0.21
ALMS1P1-201ENST00000428767 TIAM2Q8IVF5 1701 aa16.33■□□□□ 0.21
ALMS1P1-201ENST00000428767 GYS1P13807 737 aa16.33■□□□□ 0.2
ALMS1P1-201ENST00000428767 ARHGEF1Q92888 912 aaKnown RBP16.33■□□□□ 0.2
ALMS1P1-201ENST00000428767 DCAF5Q96JK2 942 aa16.33■□□□□ 0.2
ALMS1P1-201ENST00000428767 PIM2Q9P1W9 311 aa16.33■□□□□ 0.2
ALMS1P1-201ENST00000428767 SPG7Q9UQ90 795 aa16.33■□□□□ 0.2
ALMS1P1-201ENST00000428767 KDRP35968 1356 aa16.33■□□□□ 0.2
ALMS1P1-201ENST00000428767 DALRD3Q5D0E6 543 aaKnown RBP16.32■□□□□ 0.2
ALMS1P1-201ENST00000428767 ATG3Q9NT62 314 aa16.32■□□□□ 0.2
ALMS1P1-201ENST00000428767 ZNF831Q5JPB2 1677 aa16.31■□□□□ 0.2
ALMS1P1-201ENST00000428767 RFC4P35249 363 aa16.31■□□□□ 0.2
ALMS1P1-201ENST00000428767 RBM42Q9BTD8 480 aaKnown RBP16.31■□□□□ 0.2
ALMS1P1-201ENST00000428767 EMILIN1Q9Y6C2 1016 aa16.31■□□□□ 0.2
ALMS1P1-201ENST00000428767 ANKRD26Q9UPS8 1709 aa16.31■□□□□ 0.2
ALMS1P1-201ENST00000428767 NCAPD2Q15021 1401 aa16.3■□□□□ 0.2
ALMS1P1-201ENST00000428767 RASSF7Q02833 373 aa16.3■□□□□ 0.2
ALMS1P1-201ENST00000428767 SLC4A9Q96Q91 983 aa16.3■□□□□ 0.2
ALMS1P1-201ENST00000428767 TESK2Q96S53 571 aa16.3■□□□□ 0.2
ALMS1P1-201ENST00000428767 CHRNA5P30532 468 aa16.29■□□□□ 0.2
ALMS1P1-201ENST00000428767 KIF24Q5T7B8 1368 aa16.28■□□□□ 0.2
ALMS1P1-201ENST00000428767 PPM1GO15355 546 aaPredicted RBP16.28■□□□□ 0.2
ALMS1P1-201ENST00000428767 PHKG2P15735 406 aa16.28■□□□□ 0.2
ALMS1P1-201ENST00000428767 ADRA2BP18089 450 aa16.28■□□□□ 0.2
ALMS1P1-201ENST00000428767 AFDNP55196 1824 aaKnown RBP16.27■□□□□ 0.2
ALMS1P1-201ENST00000428767 ST20-MTHFSA0A0A6YYL1 179 aa16.27■□□□□ 0.2
ALMS1P1-201ENST00000428767 IFNL2Q8IZJ0 200 aa16.27■□□□□ 0.2
ALMS1P1-201ENST00000428767 SRP68Q9UHB9 627 aaKnown RBP16.27■□□□□ 0.2
ALMS1P1-201ENST00000428767 CNTNAP4Q9C0A0 1308 aa16.26■□□□□ 0.19
ALMS1P1-201ENST00000428767 RPS6KA4O75676 772 aa16.26■□□□□ 0.19
ALMS1P1-201ENST00000428767 DDR1Q08345 913 aa16.26■□□□□ 0.19
ALMS1P1-201ENST00000428767 RC3H1Q5TC82 1133 aaKnown RBP16.25■□□□□ 0.19
ALMS1P1-201ENST00000428767 DLEC1Q9Y238 1755 aa16.25■□□□□ 0.19
ALMS1P1-201ENST00000428767 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
ALMS1P1-201ENST00000428767 FKBP8Q14318 412 aa16.24■□□□□ 0.19
ALMS1P1-201ENST00000428767 EYA1Q99502 592 aa16.24■□□□□ 0.19
ALMS1P1-201ENST00000428767 TJP1Q07157 1748 aa16.24■□□□□ 0.19
ALMS1P1-201ENST00000428767 TONSLQ96HA7 1378 aa16.24■□□□□ 0.19
ALMS1P1-201ENST00000428767 KDM6AO15550 1401 aaPredicted RBP16.23■□□□□ 0.19
ALMS1P1-201ENST00000428767 SLC34A2O95436 690 aa16.23■□□□□ 0.19
ALMS1P1-201ENST00000428767 GLTPD2A6NH11 291 aa16.22■□□□□ 0.19
ALMS1P1-201ENST00000428767 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.22■□□□□ 0.19
ALMS1P1-201ENST00000428767 MKRN1Q9UHC7 482 aaKnown RBP16.22■□□□□ 0.19
ALMS1P1-201ENST00000428767 USP42Q9H9J4 1324 aaKnown RBP16.21■□□□□ 0.19
ALMS1P1-201ENST00000428767 ZC3H4Q9UPT8 1303 aaKnown RBP16.21■□□□□ 0.19
ALMS1P1-201ENST00000428767 ADAMTS7Q9UKP4 1686 aa16.21■□□□□ 0.19
ALMS1P1-201ENST00000428767 DICER1Q9UPY3 1922 aaKnown RBP16.21■□□□□ 0.19
ALMS1P1-201ENST00000428767 PTCD1O75127 700 aaKnown RBP16.2■□□□□ 0.18
ALMS1P1-201ENST00000428767 LMNB1P20700 586 aa16.2■□□□□ 0.18
ALMS1P1-201ENST00000428767 CRKLP46109 303 aaKnown RBP16.2■□□□□ 0.18
ALMS1P1-201ENST00000428767 POLRMTO00411 1230 aaKnown RBP16.19■□□□□ 0.18
ALMS1P1-201ENST00000428767 ERVV-2B6SEH9 535 aa16.18■□□□□ 0.18
ALMS1P1-201ENST00000428767 FOXN1O15353 648 aa16.18■□□□□ 0.18
ALMS1P1-201ENST00000428767 NRXN2Q9P2S2 1712 aa16.18■□□□□ 0.18
ALMS1P1-201ENST00000428767 WASHC2AQ641Q2 1341 aa16.18■□□□□ 0.18
ALMS1P1-201ENST00000428767 CACNA1SQ13698 1873 aa16.17■□□□□ 0.18
ALMS1P1-201ENST00000428767 CABP4P57796 275 aa16.17■□□□□ 0.18
ALMS1P1-201ENST00000428767 POTECB2RU33 542 aa16.16■□□□□ 0.18
ALMS1P1-201ENST00000428767 VIRMAQ69YN4 1812 aaKnown RBP16.15■□□□□ 0.18
ALMS1P1-201ENST00000428767 FER1L6Q2WGJ9 1857 aa16.14■□□□□ 0.17
ALMS1P1-201ENST00000428767 NFKBIEO00221 500 aa16.14■□□□□ 0.17
ALMS1P1-201ENST00000428767 SLC24A1O60721 1099 aa16.14■□□□□ 0.17
ALMS1P1-201ENST00000428767 TM4SF1P30408 202 aa16.14■□□□□ 0.17
ALMS1P1-201ENST00000428767 EIF4A2Q14240 407 aaKnown RBP16.14■□□□□ 0.17
ALMS1P1-201ENST00000428767 USPL1Q5W0Q7 1092 aa16.14■□□□□ 0.17
ALMS1P1-201ENST00000428767 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.17
ALMS1P1-201ENST00000428767 CARD14Q9BXL6 1004 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms