RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 KDRP35968 1356 aa21.25■□□□□ 0.99
SEC13-210ENST00000428626 YBX3P16989 372 aaKnown RBP eCLIP21.25■□□□□ 0.99
SEC13-210ENST00000428626 IL13P35225 146 aa21.24■□□□□ 0.99
SEC13-210ENST00000428626 ATP6V1AP38606 617 aa21.24■□□□□ 0.99
SEC13-210ENST00000428626 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
SEC13-210ENST00000428626 PLEKHO1Q53GL0 409 aaPredicted RBP21.23■□□□□ 0.99
SEC13-210ENST00000428626 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
SEC13-210ENST00000428626 ERVV-2B6SEH9 535 aa21.22■□□□□ 0.99
SEC13-210ENST00000428626 PER1O15534 1290 aaPredicted RBP21.22■□□□□ 0.99
SEC13-210ENST00000428626 SULT6B1Q6IMI4 303 aa21.22■□□□□ 0.99
SEC13-210ENST00000428626 DCAF5Q96JK2 942 aa21.22■□□□□ 0.99
SEC13-210ENST00000428626 SSFA2P28290 1259 aa21.21■□□□□ 0.99
SEC13-210ENST00000428626 GNPATO15228 680 aa21.2■□□□□ 0.98
SEC13-210ENST00000428626 HMGB2P26583 209 aaKnown RBP21.2■□□□□ 0.98
SEC13-210ENST00000428626 AMOTQ4VCS5 1084 aa21.2■□□□□ 0.98
SEC13-210ENST00000428626 ZNF831Q5JPB2 1677 aa21.18■□□□□ 0.98
SEC13-210ENST00000428626 COL5A3P25940 1745 aaPredicted RBP21.18■□□□□ 0.98
SEC13-210ENST00000428626 HSP90AB1P08238 724 aaKnown RBP21.18■□□□□ 0.98
SEC13-210ENST00000428626 MTHFSP49914 203 aa21.18■□□□□ 0.98
SEC13-210ENST00000428626 CD2APQ9Y5K6 639 aa21.18■□□□□ 0.98
SEC13-210ENST00000428626 RBM42Q9BTD8 480 aaKnown RBP21.17■□□□□ 0.98
SEC13-210ENST00000428626 MYH14Q7Z406 1995 aaKnown RBP21.17■□□□□ 0.98
SEC13-210ENST00000428626 CABP4P57796 275 aa21.16■□□□□ 0.98
SEC13-210ENST00000428626 CC2D1BQ5T0F9 858 aaKnown RBP21.15■□□□□ 0.98
SEC13-210ENST00000428626 SCN11AQ9UI33 1791 aa21.15■□□□□ 0.98
SEC13-210ENST00000428626 C1orf141Q5JVX7 400 aa21.14■□□□□ 0.97
SEC13-210ENST00000428626 NFATC2IPQ8NCF5 419 aa21.14■□□□□ 0.97
SEC13-210ENST00000428626 CNTNAP4Q9C0A0 1308 aa21.12■□□□□ 0.97
SEC13-210ENST00000428626 PTCD1O75127 700 aaKnown RBP21.12■□□□□ 0.97
SEC13-210ENST00000428626 HMOX1P09601 288 aa21.12■□□□□ 0.97
SEC13-210ENST00000428626 WWC3Q9ULE0 1092 aa21.12■□□□□ 0.97
SEC13-210ENST00000428626 GRIN3BO60391 1043 aa21.11■□□□□ 0.97
SEC13-210ENST00000428626 RC3H1Q5TC82 1133 aaKnown RBP21.11■□□□□ 0.97
SEC13-210ENST00000428626 ARHGEF1Q92888 912 aaKnown RBP21.11■□□□□ 0.97
SEC13-210ENST00000428626 LGR6Q9HBX8 967 aa21.11■□□□□ 0.97
SEC13-210ENST00000428626 RTCBQ9Y3I0 505 aaKnown RBP21.11■□□□□ 0.97
SEC13-210ENST00000428626 TJP1Q07157 1748 aa21.11■□□□□ 0.97
SEC13-210ENST00000428626 MMP10P09238 476 aa21.1■□□□□ 0.97
SEC13-210ENST00000428626 TRAPPC3LQ5T215 181 aa21.1■□□□□ 0.97
SEC13-210ENST00000428626 C4AP0C0L4 1744 aa21.09■□□□□ 0.97
SEC13-210ENST00000428626 COL3A1P02461 1466 aaPredicted RBP21.09■□□□□ 0.97
SEC13-210ENST00000428626 RPS6KA4O75676 772 aa21.09■□□□□ 0.97
SEC13-210ENST00000428626 KIAA1551Q9HCM1 1747 aa21.09■□□□□ 0.97
SEC13-210ENST00000428626 VIRMAQ69YN4 1812 aaKnown RBP21.08■□□□□ 0.97
SEC13-210ENST00000428626 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.97
SEC13-210ENST00000428626 AKAP4Q5JQC9 854 aa21.08■□□□□ 0.97
SEC13-210ENST00000428626 CICQ96RK0 1608 aaPredicted RBP21.07■□□□□ 0.96
SEC13-210ENST00000428626 KIF13BQ9NQT8 1826 aa21.07■□□□□ 0.96
SEC13-210ENST00000428626 GYS1P13807 737 aa21.07■□□□□ 0.96
SEC13-210ENST00000428626 MTHFSDQ2M296 383 aaKnown RBP21.07■□□□□ 0.96
SEC13-210ENST00000428626 MRC1P22897 1456 aa21.07■□□□□ 0.96
SEC13-210ENST00000428626 ADAMTS7Q9UKP4 1686 aa21.06■□□□□ 0.96
SEC13-210ENST00000428626 RNMTO43148 476 aaKnown RBP21.06■□□□□ 0.96
SEC13-210ENST00000428626 DIAPH1O60610 1272 aaKnown RBP21.06■□□□□ 0.96
SEC13-210ENST00000428626 CRKLP46109 303 aaKnown RBP21.06■□□□□ 0.96
SEC13-210ENST00000428626 SLC52A2Q9HAB3 445 aa21.06■□□□□ 0.96
SEC13-210ENST00000428626 NPC1L1Q9UHC9 1359 aa21.06■□□□□ 0.96
SEC13-210ENST00000428626 ADRA2BP18089 450 aa21.05■□□□□ 0.96
SEC13-210ENST00000428626 PXDNLA1KZ92 1463 aa21.05■□□□□ 0.96
SEC13-210ENST00000428626 SLC39A6Q13433 755 aa21.04■□□□□ 0.96
SEC13-210ENST00000428626 N4BP2Q86UW6 1770 aaPredicted RBP21.03■□□□□ 0.96
SEC13-210ENST00000428626 C1QTNF8P60827 252 aa21.03■□□□□ 0.96
SEC13-210ENST00000428626 INTS5Q6P9B9 1019 aaKnown RBP21.03■□□□□ 0.96
SEC13-210ENST00000428626 DNAJC10Q8IXB1 793 aa21.03■□□□□ 0.96
SEC13-210ENST00000428626 NLGN1Q8N2Q7 840 aa21.03■□□□□ 0.96
SEC13-210ENST00000428626 SRP68Q9UHB9 627 aaKnown RBP21.03■□□□□ 0.96
SEC13-210ENST00000428626 C10orf71Q711Q0 1435 aa21.03■□□□□ 0.96
SEC13-210ENST00000428626 RFC4P35249 363 aa21.02■□□□□ 0.96
SEC13-210ENST00000428626 KCPQ6ZWJ8 1503 aa21.02■□□□□ 0.96
SEC13-210ENST00000428626 ADCY9O60503 1353 aa21.01■□□□□ 0.95
SEC13-210ENST00000428626 ATP10DQ9P241 1426 aa21.01■□□□□ 0.95
SEC13-210ENST00000428626 A0A0G2JLW4 131 aa20.99■□□□□ 0.95
SEC13-210ENST00000428626 FKBP8Q14318 412 aa20.99■□□□□ 0.95
SEC13-210ENST00000428626 USP42Q9H9J4 1324 aaKnown RBP20.99■□□□□ 0.95
SEC13-210ENST00000428626 DDR1Q08345 913 aa20.98■□□□□ 0.95
SEC13-210ENST00000428626 U2SURPO15042 1029 aaKnown RBP20.97■□□□□ 0.95
SEC13-210ENST00000428626 GIGYF1O75420 1035 aaPredicted RBP20.97■□□□□ 0.95
SEC13-210ENST00000428626 CYP19A1P11511 503 aaPredicted RBP20.97■□□□□ 0.95
SEC13-210ENST00000428626 CCDC87Q9NVE4 849 aa20.97■□□□□ 0.95
SEC13-210ENST00000428626 UBR2Q8IWV8 1755 aa20.97■□□□□ 0.95
SEC13-210ENST00000428626 DPEP1P16444 411 aa20.96■□□□□ 0.95
SEC13-210ENST00000428626 SOS1Q07889 1333 aaPredicted RBP20.96■□□□□ 0.95
SEC13-210ENST00000428626 BRCA1P38398 1863 aaKnown RBP20.96■□□□□ 0.95
SEC13-210ENST00000428626 TGFB2P61812 414 aa20.95■□□□□ 0.94
SEC13-210ENST00000428626 IL17REQ8NFR9 667 aa20.95■□□□□ 0.94
SEC13-210ENST00000428626 PARP3Q9Y6F1 533 aa20.95■□□□□ 0.94
SEC13-210ENST00000428626 KCNA3P22001 575 aa20.94■□□□□ 0.94
SEC13-210ENST00000428626 ZBTB1Q9Y2K1 713 aa20.94■□□□□ 0.94
SEC13-210ENST00000428626 SENP3-EIF4A1A0A087X0R7 540 aa20.93■□□□□ 0.94
SEC13-210ENST00000428626 PHACTR3Q96KR7 559 aa20.93■□□□□ 0.94
SEC13-210ENST00000428626 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
SEC13-210ENST00000428626 TM4SF1P30408 202 aa20.92■□□□□ 0.94
SEC13-210ENST00000428626 USPL1Q5W0Q7 1092 aa20.92■□□□□ 0.94
SEC13-210ENST00000428626 BCS1LQ9Y276 419 aa20.92■□□□□ 0.94
SEC13-210ENST00000428626 POLRMTO00411 1230 aaKnown RBP20.91■□□□□ 0.94
SEC13-210ENST00000428626 ZNF526Q8TF50 670 aaPredicted RBP20.91■□□□□ 0.94
SEC13-210ENST00000428626 BCL2L12Q9HB09 334 aa20.91■□□□□ 0.94
SEC13-210ENST00000428626 COL15A1P39059 1388 aa20.9■□□□□ 0.94
SEC13-210ENST00000428626 RSPH6AQ9H0K4 717 aa20.9■□□□□ 0.94
SEC13-210ENST00000428626 GNAT3A8MTJ3 354 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms