RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
C9orf3-205ENST00000427193 LYPD4Q6UWN0 246 aa11.04□□□□□ -0.64
C9orf3-205ENST00000427193 NUCKS1Q9H1E3 243 aaKnown RBP11.04□□□□□ -0.64
C9orf3-205ENST00000427193 A0A1B0GTH6 734 aa11.03□□□□□ -0.64
C9orf3-205ENST00000427193 MAP3K10Q02779 954 aa11.03□□□□□ -0.64
C9orf3-205ENST00000427193 SEMA3FQ13275 785 aa11.03□□□□□ -0.64
C9orf3-205ENST00000427193 TMEM214Q6NUQ4 689 aaKnown RBP11.03□□□□□ -0.64
C9orf3-205ENST00000427193 ETNK1Q9HBU6 452 aa11.02□□□□□ -0.65
C9orf3-205ENST00000427193 IGF1RP08069 1367 aa11.02□□□□□ -0.65
C9orf3-205ENST00000427193 CELA2BP08218 269 aaPredicted RBP11.01□□□□□ -0.65
C9orf3-205ENST00000427193 PLPP7Q8NBV4 271 aa11.01□□□□□ -0.65
C9orf3-205ENST00000427193 PHKA2P46019 1235 aa11□□□□□ -0.65
C9orf3-205ENST00000427193 MARSP56192 900 aaKnown RBP11□□□□□ -0.65
C9orf3-205ENST00000427193 C4orf17Q53FE4 359 aa11□□□□□ -0.65
C9orf3-205ENST00000427193 RHBDD1Q8TEB9 315 aa11□□□□□ -0.65
C9orf3-205ENST00000427193 ENAMQ9NRM1 1142 aa11□□□□□ -0.65
C9orf3-205ENST00000427193 COG6Q9Y2V7 657 aa11□□□□□ -0.65
C9orf3-205ENST00000427193 RASSF7Q02833 373 aa10.99□□□□□ -0.65
C9orf3-205ENST00000427193 LBRQ14739 615 aaKnown RBP10.99□□□□□ -0.65
C9orf3-205ENST00000427193 TLR1Q15399 786 aa10.99□□□□□ -0.65
C9orf3-205ENST00000427193 PPARGC1BQ86YN6 1023 aaKnown RBP10.99□□□□□ -0.65
C9orf3-205ENST00000427193 TMEM151AQ8N4L1 468 aa10.99□□□□□ -0.65
C9orf3-205ENST00000427193 GPAMQ9HCL2 828 aa10.99□□□□□ -0.65
C9orf3-205ENST00000427193 NSFL1CQ9UNZ2 370 aaKnown RBP10.99□□□□□ -0.65
C9orf3-205ENST00000427193 MX2P20592 715 aa10.98□□□□□ -0.65
C9orf3-205ENST00000427193 SCARF2Q96GP6 870 aaPredicted RBP10.98□□□□□ -0.65
C9orf3-205ENST00000427193 CFHR5Q9BXR6 569 aa10.98□□□□□ -0.65
C9orf3-205ENST00000427193 GDF11O95390 407 aa10.97□□□□□ -0.65
C9orf3-205ENST00000427193 STAU1O95793 577 aaKnown RBP10.97□□□□□ -0.65
C9orf3-205ENST00000427193 SCNN1DP51172 638 aa10.97□□□□□ -0.65
C9orf3-205ENST00000427193 INHAP05111 366 aa10.96□□□□□ -0.65
C9orf3-205ENST00000427193 THBS1P07996 1170 aa10.96□□□□□ -0.65
C9orf3-205ENST00000427193 CSB-PGBD3P0DP91 1061 aa10.96□□□□□ -0.65
C9orf3-205ENST00000427193 GDF10P55107 478 aa10.96□□□□□ -0.65
C9orf3-205ENST00000427193 WWC1Q8IX03 1113 aa10.96□□□□□ -0.65
C9orf3-205ENST00000427193 PGBD3Q8N328 593 aa10.96□□□□□ -0.65
C9orf3-205ENST00000427193 LRRC4BQ9NT99 713 aa10.95□□□□□ -0.66
C9orf3-205ENST00000427193 PHF24Q9UPV7 400 aa10.95□□□□□ -0.66
C9orf3-205ENST00000427193 NACADO15069 1562 aa10.94□□□□□ -0.66
C9orf3-205ENST00000427193 BCRP11274 1271 aa10.94□□□□□ -0.66
C9orf3-205ENST00000427193 MSX1P28360 303 aa10.94□□□□□ -0.66
C9orf3-205ENST00000427193 KANK3Q6NY19 840 aa10.94□□□□□ -0.66
C9orf3-205ENST00000427193 ACDQ96AP0 544 aa10.94□□□□□ -0.66
C9orf3-205ENST00000427193 MAP2K3P46734 347 aa10.93□□□□□ -0.66
C9orf3-205ENST00000427193 EFHC2Q5JST6 749 aa10.93□□□□□ -0.66
C9orf3-205ENST00000427193 IRS1P35568 1242 aa10.92□□□□□ -0.66
C9orf3-205ENST00000427193 UBAP2LQ14157 1087 aaKnown RBP10.92□□□□□ -0.66
C9orf3-205ENST00000427193 KCTD17Q8N5Z5 321 aa10.92□□□□□ -0.66
C9orf3-205ENST00000427193 RUBCNLQ9H714 662 aa10.92□□□□□ -0.66
C9orf3-205ENST00000427193 LZTS3O60299 673 aaPredicted RBP10.91□□□□□ -0.66
C9orf3-205ENST00000427193 SMTNP53814 917 aa10.91□□□□□ -0.66
C9orf3-205ENST00000427193 TBC1D9Q6ZT07 1266 aa10.91□□□□□ -0.66
C9orf3-205ENST00000427193 CRISPLD1Q9H336 500 aa10.91□□□□□ -0.66
C9orf3-205ENST00000427193 ALG2Q9H553 416 aa10.91□□□□□ -0.66
C9orf3-205ENST00000427193 PIK3CDO00329 1044 aa10.9□□□□□ -0.66
C9orf3-205ENST00000427193 RAD21O60216 631 aa10.9□□□□□ -0.66
C9orf3-205ENST00000427193 PLA2G4AP47712 749 aa10.9□□□□□ -0.66
C9orf3-205ENST00000427193 EML3Q32P44 896 aa10.9□□□□□ -0.66
C9orf3-205ENST00000427193 NFATC2IPQ8NCF5 419 aa10.9□□□□□ -0.66
C9orf3-205ENST00000427193 C1orf216Q8TAB5 229 aa10.9□□□□□ -0.66
C9orf3-205ENST00000427193 SLC4A9Q96Q91 983 aa10.9□□□□□ -0.66
C9orf3-205ENST00000427193 NIFKQ9BYG3 293 aaKnown RBP10.9□□□□□ -0.66
C9orf3-205ENST00000427193 TMEM229AB2RXF0 380 aa10.89□□□□□ -0.67
C9orf3-205ENST00000427193 FLIIQ13045 1269 aa10.89□□□□□ -0.67
C9orf3-205ENST00000427193 NEDD1Q8NHV4 660 aa10.89□□□□□ -0.67
C9orf3-205ENST00000427193 OXCT2Q9BYC2 517 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-205ENST00000427193 ATXN7L1Q9ULK2 861 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-205ENST00000427193 DNMT3AQ9Y6K1 912 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-205ENST00000427193 SKIP12755 728 aa10.88□□□□□ -0.67
C9orf3-205ENST00000427193 POM121Q96HA1 1249 aa10.88□□□□□ -0.67
C9orf3-205ENST00000427193 PCDHGA11Q9Y5H2 935 aa10.88□□□□□ -0.67
C9orf3-205ENST00000427193 PHF20L1A8MW92 1017 aa10.87□□□□□ -0.67
C9orf3-205ENST00000427193 OIP5O43482 229 aa10.87□□□□□ -0.67
C9orf3-205ENST00000427193 MTFR1Q15390 333 aa10.87□□□□□ -0.67
C9orf3-205ENST00000427193 PODNQ7Z5L7 613 aa10.87□□□□□ -0.67
C9orf3-205ENST00000427193 SERTAD1Q9UHV2 236 aa10.87□□□□□ -0.67
C9orf3-205ENST00000427193 NOD1Q9Y239 953 aa10.87□□□□□ -0.67
C9orf3-205ENST00000427193 FIGNL1Q6PIW4 674 aa10.86□□□□□ -0.67
C9orf3-205ENST00000427193 NDFIP2Q9NV92 336 aa10.86□□□□□ -0.67
C9orf3-205ENST00000427193 CECR2Q9BXF3 1484 aa10.86□□□□□ -0.67
C9orf3-205ENST00000427193 A6NJY4 79 aa10.85□□□□□ -0.67
C9orf3-205ENST00000427193 CDK2AP1O14519 115 aa10.85□□□□□ -0.67
C9orf3-205ENST00000427193 BEND7Q8N7W2 519 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-205ENST00000427193 KLRG1Q96E93 195 aa10.85□□□□□ -0.67
C9orf3-205ENST00000427193 GDF2Q9UK05 429 aaPredicted RBP10.85□□□□□ -0.67
C9orf3-205ENST00000427193 BACH1O14867 736 aa10.84□□□□□ -0.67
C9orf3-205ENST00000427193 UBTFP17480 764 aaKnown RBP10.84□□□□□ -0.67
C9orf3-205ENST00000427193 ATP4AP20648 1035 aa10.84□□□□□ -0.67
C9orf3-205ENST00000427193 NBPF1Q3BBV0 1214 aa10.84□□□□□ -0.67
C9orf3-205ENST00000427193 NLRP8Q86W28 1048 aa10.84□□□□□ -0.67
C9orf3-205ENST00000427193 ZNF295-AS1Q8N0V1 137 aa10.84□□□□□ -0.67
C9orf3-205ENST00000427193 AIDAQ96BJ3 306 aa10.84□□□□□ -0.67
C9orf3-205ENST00000427193 ABHD17AQ96GS6 310 aa10.84□□□□□ -0.67
C9orf3-205ENST00000427193 IQSEC3Q9UPP2 1182 aaPredicted RBP10.84□□□□□ -0.67
C9orf3-205ENST00000427193 BICRAQ9NZM4 1560 aa10.84□□□□□ -0.67
C9orf3-205ENST00000427193 BNIP3LO60238 219 aa10.83□□□□□ -0.68
C9orf3-205ENST00000427193 FGFR3P22607 806 aa10.83□□□□□ -0.68
C9orf3-205ENST00000427193 GTF2IP78347 998 aa10.83□□□□□ -0.68
C9orf3-205ENST00000427193 FOXK2Q01167 660 aa10.83□□□□□ -0.68
C9orf3-205ENST00000427193 NCOA4Q13772 614 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms