RNA–Protein interactions for RNA: ENST00000427007.5

HDLBP-213, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 459 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-213ENST00000427007 CD2APQ9Y5K6 639 aa14.02□□□□□ -0.17
HDLBP-213ENST00000427007 C1QTNF8P60827 252 aa14.01□□□□□ -0.17
HDLBP-213ENST00000427007 KDRP35968 1356 aa14□□□□□ -0.17
HDLBP-213ENST00000427007 SENP3-EIF4A1A0A087X0R7 540 aa14□□□□□ -0.17
HDLBP-213ENST00000427007 GIGYF1O75420 1035 aaPredicted RBP14□□□□□ -0.17
HDLBP-213ENST00000427007 MORC1Q86VD1 984 aa14□□□□□ -0.17
HDLBP-213ENST00000427007 RBM42Q9BTD8 480 aaKnown RBP14□□□□□ -0.17
HDLBP-213ENST00000427007 COL5A3P25940 1745 aaPredicted RBP14□□□□□ -0.17
HDLBP-213ENST00000427007 KDM6AO15550 1401 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-213ENST00000427007 PLEKHG2Q9H7P9 1386 aa13.99□□□□□ -0.17
HDLBP-213ENST00000427007 ZNF831Q5JPB2 1677 aa13.99□□□□□ -0.17
HDLBP-213ENST00000427007 PLEKHO1Q53GL0 409 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-213ENST00000427007 ZNF530Q6P9A1 599 aaPredicted RBP13.99□□□□□ -0.17
HDLBP-213ENST00000427007 AEBP1Q8IUX7 1158 aa13.99□□□□□ -0.17
HDLBP-213ENST00000427007 ERVV-2B6SEH9 535 aa13.98□□□□□ -0.17
HDLBP-213ENST00000427007 DCAF5Q96JK2 942 aa13.98□□□□□ -0.17
HDLBP-213ENST00000427007 SLC4A9Q96Q91 983 aa13.98□□□□□ -0.17
HDLBP-213ENST00000427007 HSP90AB1P08238 724 aaKnown RBP13.97□□□□□ -0.17
HDLBP-213ENST00000427007 CABP4P57796 275 aa13.97□□□□□ -0.17
HDLBP-213ENST00000427007 C4AP0C0L4 1744 aa13.96□□□□□ -0.17
HDLBP-213ENST00000427007 AMOTQ4VCS5 1084 aa13.96□□□□□ -0.17
HDLBP-213ENST00000427007 SULT6B1Q6IMI4 303 aa13.96□□□□□ -0.17
HDLBP-213ENST00000427007 RTCBQ9Y3I0 505 aaKnown RBP13.96□□□□□ -0.17
HDLBP-213ENST00000427007 KNSTRNQ9Y448 316 aa13.96□□□□□ -0.17
HDLBP-213ENST00000427007 CICQ96RK0 1608 aaPredicted RBP13.96□□□□□ -0.17
HDLBP-213ENST00000427007 ATP10DQ9P241 1426 aa13.96□□□□□ -0.18
HDLBP-213ENST00000427007 N4BP2Q86UW6 1770 aaPredicted RBP13.96□□□□□ -0.18
HDLBP-213ENST00000427007 MMP10P09238 476 aa13.95□□□□□ -0.18
HDLBP-213ENST00000427007 MTHFSP49914 203 aa13.95□□□□□ -0.18
HDLBP-213ENST00000427007 C1orf141Q5JVX7 400 aa13.95□□□□□ -0.18
HDLBP-213ENST00000427007 TRAPPC3LQ5T215 181 aa13.95□□□□□ -0.18
HDLBP-213ENST00000427007 KIAA1551Q9HCM1 1747 aa13.95□□□□□ -0.18
HDLBP-213ENST00000427007 KIF13BQ9NQT8 1826 aa13.94□□□□□ -0.18
HDLBP-213ENST00000427007 SCN11AQ9UI33 1791 aa13.94□□□□□ -0.18
HDLBP-213ENST00000427007 TJP1Q07157 1748 aa13.94□□□□□ -0.18
HDLBP-213ENST00000427007 MYH14Q7Z406 1995 aaKnown RBP13.93□□□□□ -0.18
HDLBP-213ENST00000427007 VIRMAQ69YN4 1812 aaKnown RBP13.93□□□□□ -0.18
HDLBP-213ENST00000427007 PTCD1O75127 700 aaKnown RBP13.93□□□□□ -0.18
HDLBP-213ENST00000427007 IL13P35225 146 aa13.93□□□□□ -0.18
HDLBP-213ENST00000427007 NFATC2IPQ8NCF5 419 aa13.93□□□□□ -0.18
HDLBP-213ENST00000427007 ZNF526Q8TF50 670 aaPredicted RBP13.93□□□□□ -0.18
HDLBP-213ENST00000427007 ARHGEF1Q92888 912 aaKnown RBP13.93□□□□□ -0.18
HDLBP-213ENST00000427007 KIF7Q2M1P5 1343 aa13.92□□□□□ -0.18
HDLBP-213ENST00000427007 CNTNAP4Q9C0A0 1308 aa13.92□□□□□ -0.18
HDLBP-213ENST00000427007 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
HDLBP-213ENST00000427007 PXDNLA1KZ92 1463 aa13.92□□□□□ -0.18
HDLBP-213ENST00000427007 RPS6KA4O75676 772 aa13.91□□□□□ -0.18
HDLBP-213ENST00000427007 RFC4P35249 363 aa13.91□□□□□ -0.18
HDLBP-213ENST00000427007 RC3H1Q5TC82 1133 aaKnown RBP13.91□□□□□ -0.18
HDLBP-213ENST00000427007 NLGN1Q8N2Q7 840 aa13.91□□□□□ -0.18
HDLBP-213ENST00000427007 GPBP1L1Q9HC44 474 aaPredicted RBP13.91□□□□□ -0.18
HDLBP-213ENST00000427007 ADCY9O60503 1353 aa13.91□□□□□ -0.18
HDLBP-213ENST00000427007 GYS1P13807 737 aa13.9□□□□□ -0.18
HDLBP-213ENST00000427007 ADRA2BP18089 450 aa13.9□□□□□ -0.18
HDLBP-213ENST00000427007 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.19
HDLBP-213ENST00000427007 HMOX1P09601 288 aa13.89□□□□□ -0.19
HDLBP-213ENST00000427007 CRKLP46109 303 aaKnown RBP13.89□□□□□ -0.19
HDLBP-213ENST00000427007 A0A0G2JLW4 131 aa13.88□□□□□ -0.19
HDLBP-213ENST00000427007 AKAP4Q5JQC9 854 aa13.88□□□□□ -0.19
HDLBP-213ENST00000427007 CC2D1BQ5T0F9 858 aaKnown RBP13.88□□□□□ -0.19
HDLBP-213ENST00000427007 LGR6Q9HBX8 967 aa13.88□□□□□ -0.19
HDLBP-213ENST00000427007 CCDC87Q9NVE4 849 aa13.88□□□□□ -0.19
HDLBP-213ENST00000427007 SRP68Q9UHB9 627 aaKnown RBP13.88□□□□□ -0.19
HDLBP-213ENST00000427007 BCS1LQ9Y276 419 aa13.88□□□□□ -0.19
HDLBP-213ENST00000427007 PARP3Q9Y6F1 533 aa13.88□□□□□ -0.19
HDLBP-213ENST00000427007 BRCA1P38398 1863 aaKnown RBP13.88□□□□□ -0.19
HDLBP-213ENST00000427007 TGFB2P61812 414 aa13.87□□□□□ -0.19
HDLBP-213ENST00000427007 CNGB1Q14028 1251 aaPredicted RBP13.87□□□□□ -0.19
HDLBP-213ENST00000427007 ADAMTS7Q9UKP4 1686 aa13.87□□□□□ -0.19
HDLBP-213ENST00000427007 DPEP1P16444 411 aa13.86□□□□□ -0.19
HDLBP-213ENST00000427007 SLC52A2Q9HAB3 445 aa13.86□□□□□ -0.19
HDLBP-213ENST00000427007 MRC1P22897 1456 aa13.86□□□□□ -0.19
HDLBP-213ENST00000427007 PER1O15534 1290 aaPredicted RBP13.85□□□□□ -0.19
HDLBP-213ENST00000427007 RNMTO43148 476 aaKnown RBP13.85□□□□□ -0.19
HDLBP-213ENST00000427007 SLC39A6Q13433 755 aa13.85□□□□□ -0.19
HDLBP-213ENST00000427007 FKBP8Q14318 412 aa13.85□□□□□ -0.19
HDLBP-213ENST00000427007 DNAJC10Q8IXB1 793 aa13.85□□□□□ -0.19
HDLBP-213ENST00000427007 USP42Q9H9J4 1324 aaKnown RBP13.85□□□□□ -0.19
HDLBP-213ENST00000427007 DIAPH1O60610 1272 aaKnown RBP13.84□□□□□ -0.19
HDLBP-213ENST00000427007 FCHSD2O94868 740 aa13.84□□□□□ -0.19
HDLBP-213ENST00000427007 MTHFSDQ2M296 383 aaKnown RBP13.84□□□□□ -0.19
HDLBP-213ENST00000427007 INTS5Q6P9B9 1019 aaKnown RBP13.84□□□□□ -0.19
HDLBP-213ENST00000427007 KCPQ6ZWJ8 1503 aa13.84□□□□□ -0.19
HDLBP-213ENST00000427007 ARFGEF1Q9Y6D6 1849 aa13.83□□□□□ -0.2
HDLBP-213ENST00000427007 DDR1Q08345 913 aa13.83□□□□□ -0.2
HDLBP-213ENST00000427007 ARHGAP27Q6ZUM4 889 aa13.83□□□□□ -0.2
HDLBP-213ENST00000427007 UBR2Q8IWV8 1755 aa13.82□□□□□ -0.2
HDLBP-213ENST00000427007 KCNA3P22001 575 aa13.82□□□□□ -0.2
HDLBP-213ENST00000427007 USPL1Q5W0Q7 1092 aa13.82□□□□□ -0.2
HDLBP-213ENST00000427007 COL3A1P02461 1466 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-213ENST00000427007 CYP19A1P11511 503 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-213ENST00000427007 SOS1Q07889 1333 aaPredicted RBP13.81□□□□□ -0.2
HDLBP-213ENST00000427007 AFDNP55196 1824 aaKnown RBP13.8□□□□□ -0.2
HDLBP-213ENST00000427007 POLRMTO00411 1230 aaKnown RBP13.8□□□□□ -0.2
HDLBP-213ENST00000427007 KIF3CO14782 793 aa13.8□□□□□ -0.2
HDLBP-213ENST00000427007 U2SURPO15042 1029 aaKnown RBP13.8□□□□□ -0.2
HDLBP-213ENST00000427007 ZPR1O75312 459 aa13.8□□□□□ -0.2
HDLBP-213ENST00000427007 CHRNA5P30532 468 aa13.8□□□□□ -0.2
HDLBP-213ENST00000427007 ZBTB1Q9Y2K1 713 aa13.8□□□□□ -0.2
HDLBP-213ENST00000427007 COL15A1P39059 1388 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms