RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 EXOC5O00471 708 aa19.35■□□□□ 0.69
GINS3-203ENST00000426538 BRPF1P55201 1214 aaPredicted RBP19.35■□□□□ 0.69
GINS3-203ENST00000426538 NFATC2IPQ8NCF5 419 aa19.35■□□□□ 0.69
GINS3-203ENST00000426538 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
GINS3-203ENST00000426538 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
GINS3-203ENST00000426538 CABP4P57796 275 aa19.34■□□□□ 0.69
GINS3-203ENST00000426538 CRBNQ96SW2 442 aa19.34■□□□□ 0.69
GINS3-203ENST00000426538 NOB1Q9ULX3 412 aaKnown RBP19.34■□□□□ 0.69
GINS3-203ENST00000426538 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
GINS3-203ENST00000426538 ADAMTS7Q9UKP4 1686 aa19.34■□□□□ 0.69
GINS3-203ENST00000426538 NKX1-1Q15270 411 aaPredicted RBP19.34■□□□□ 0.69
GINS3-203ENST00000426538 FNBP4Q8N3X1 1017 aaPredicted RBP19.34■□□□□ 0.69
GINS3-203ENST00000426538 SPATA31A5Q5VU36 1347 aa19.33■□□□□ 0.69
GINS3-203ENST00000426538 SPATA31A7Q8IWB4 1347 aa19.33■□□□□ 0.69
GINS3-203ENST00000426538 SCN11AQ9UI33 1791 aa19.33■□□□□ 0.69
GINS3-203ENST00000426538 EIF4A1P60842 406 aaKnown RBP19.33■□□□□ 0.68
GINS3-203ENST00000426538 MRPL50Q8N5N7 158 aaKnown RBP19.33■□□□□ 0.68
GINS3-203ENST00000426538 CHMP4AQ9BY43 222 aa19.33■□□□□ 0.68
GINS3-203ENST00000426538 TCERG1O14776 1098 aaKnown RBP19.32■□□□□ 0.68
GINS3-203ENST00000426538 FTSJ3Q8IY81 847 aaKnown RBP19.32■□□□□ 0.68
GINS3-203ENST00000426538 DISP2A7MBM2 1401 aa19.32■□□□□ 0.68
GINS3-203ENST00000426538 ERVV-2B6SEH9 535 aa19.31■□□□□ 0.68
GINS3-203ENST00000426538 ATF7IPQ6VMQ6 1270 aa19.31■□□□□ 0.68
GINS3-203ENST00000426538 USP21Q9UK80 565 aa19.31■□□□□ 0.68
GINS3-203ENST00000426538 CCDC30Q5VVM6 783 aa19.31■□□□□ 0.68
GINS3-203ENST00000426538 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
GINS3-203ENST00000426538 PANK1Q8TE04 598 aa19.31■□□□□ 0.68
GINS3-203ENST00000426538 LRP6O75581 1613 aa19.3■□□□□ 0.68
GINS3-203ENST00000426538 KCNQ3O43525 872 aa19.3■□□□□ 0.68
GINS3-203ENST00000426538 VPS72Q15906 364 aa19.3■□□□□ 0.68
GINS3-203ENST00000426538 BARGINQ6ZT62 677 aa19.3■□□□□ 0.68
GINS3-203ENST00000426538 CLUAP1Q96AJ1 413 aa19.3■□□□□ 0.68
GINS3-203ENST00000426538 STK31Q9BXU1 1019 aa19.3■□□□□ 0.68
GINS3-203ENST00000426538 BCL9LQ86UU0 1499 aa19.3■□□□□ 0.68
GINS3-203ENST00000426538 DDB1Q16531 1140 aa19.29■□□□□ 0.68
GINS3-203ENST00000426538 ZNF790Q6PG37 636 aa19.29■□□□□ 0.68
GINS3-203ENST00000426538 TTC5Q8N0Z6 440 aa19.29■□□□□ 0.68
GINS3-203ENST00000426538 ARHGAP45Q92619 1136 aa19.29■□□□□ 0.68
GINS3-203ENST00000426538 KDM3BQ7LBC6 1761 aa19.29■□□□□ 0.68
GINS3-203ENST00000426538 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
GINS3-203ENST00000426538 HOXB7P09629 217 aa19.28■□□□□ 0.68
GINS3-203ENST00000426538 TRIM27P14373 513 aa19.28■□□□□ 0.68
GINS3-203ENST00000426538 SIPA1L3O60292 1781 aaPredicted RBP19.28■□□□□ 0.68
GINS3-203ENST00000426538 CCDC136Q96JN2 1154 aa19.28■□□□□ 0.68
GINS3-203ENST00000426538 COG6Q9Y2V7 657 aa19.28■□□□□ 0.68
GINS3-203ENST00000426538 SLC39A6Q13433 755 aa19.27■□□□□ 0.68
GINS3-203ENST00000426538 SHANK3Q9BYB0 1731 aa19.26■□□□□ 0.67
GINS3-203ENST00000426538 HDGFL1Q5TGJ6 251 aa19.26■□□□□ 0.67
GINS3-203ENST00000426538 B4GALNT3Q6L9W6 998 aa19.26■□□□□ 0.67
GINS3-203ENST00000426538 TNNQ9UQP3 1299 aa19.26■□□□□ 0.67
GINS3-203ENST00000426538 MRC1P22897 1456 aa19.26■□□□□ 0.67
GINS3-203ENST00000426538 EIF2S2P20042 333 aaKnown RBP19.25■□□□□ 0.67
GINS3-203ENST00000426538 NECTIN2Q92692 538 aa19.25■□□□□ 0.67
GINS3-203ENST00000426538 RLBP1P12271 317 aa19.25■□□□□ 0.67
GINS3-203ENST00000426538 API5Q9BZZ5 524 aaKnown RBP19.25■□□□□ 0.67
GINS3-203ENST00000426538 TNS2Q63HR2 1409 aa19.24■□□□□ 0.67
GINS3-203ENST00000426538 WNK3Q9BYP7 1800 aa19.24■□□□□ 0.67
GINS3-203ENST00000426538 GIGYF1O75420 1035 aaPredicted RBP19.24■□□□□ 0.67
GINS3-203ENST00000426538 FAM98CQ17RN3 349 aaKnown RBP19.24■□□□□ 0.67
GINS3-203ENST00000426538 TMOD3Q9NYL9 352 aa19.24■□□□□ 0.67
GINS3-203ENST00000426538 AFF2P51816 1311 aa19.23■□□□□ 0.67
GINS3-203ENST00000426538 PTPRCP08575 1304 aa19.22■□□□□ 0.67
GINS3-203ENST00000426538 MVPQ14764 893 aaKnown RBP19.22■□□□□ 0.67
GINS3-203ENST00000426538 FMNL2Q96PY5 1086 aa19.22■□□□□ 0.67
GINS3-203ENST00000426538 HEG1Q9ULI3 1381 aa19.22■□□□□ 0.67
GINS3-203ENST00000426538 AAMPQ13685 434 aa19.22■□□□□ 0.67
GINS3-203ENST00000426538 ITPRIPQ8IWB1 547 aa19.22■□□□□ 0.67
GINS3-203ENST00000426538 A0A0G2JS52 829 aa19.2■□□□□ 0.66
GINS3-203ENST00000426538 MYT1Q01538 1121 aa19.2■□□□□ 0.66
GINS3-203ENST00000426538 TMEM57Q8N5G2 664 aa19.2■□□□□ 0.66
GINS3-203ENST00000426538 ZNF496Q96IT1 587 aaPredicted RBP19.2■□□□□ 0.66
GINS3-203ENST00000426538 DDX19BQ9UMR2 479 aa19.2■□□□□ 0.66
GINS3-203ENST00000426538 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.2■□□□□ 0.66
GINS3-203ENST00000426538 SNRPA1P09661 255 aaKnown RBP19.2■□□□□ 0.66
GINS3-203ENST00000426538 GJD4Q96KN9 370 aaPredicted RBP19.19■□□□□ 0.66
GINS3-203ENST00000426538 DBF4Q9UBU7 674 aaPredicted RBP19.19■□□□□ 0.66
GINS3-203ENST00000426538 TRPC5Q9UL62 973 aaPredicted RBP19.19■□□□□ 0.66
GINS3-203ENST00000426538 SYTL4Q96C24 671 aaPredicted RBP19.18■□□□□ 0.66
GINS3-203ENST00000426538 CHMP4BQ9H444 224 aaKnown RBP19.18■□□□□ 0.66
GINS3-203ENST00000426538 CACNA1FO60840 1977 aa19.18■□□□□ 0.66
GINS3-203ENST00000426538 PRAMEF22A3QJZ6 481 aa19.17■□□□□ 0.66
GINS3-203ENST00000426538 FLIIQ13045 1269 aa19.17■□□□□ 0.66
GINS3-203ENST00000426538 G2E3Q7L622 706 aa19.17■□□□□ 0.66
GINS3-203ENST00000426538 MARCH10Q8NA82 808 aaPredicted RBP19.17■□□□□ 0.66
GINS3-203ENST00000426538 PIGBQ92521 554 aa19.17■□□□□ 0.66
GINS3-203ENST00000426538 CHPF2Q9P2E5 772 aa19.17■□□□□ 0.66
GINS3-203ENST00000426538 FKBP5Q13451 457 aaPredicted RBP19.17■□□□□ 0.66
GINS3-203ENST00000426538 ABCC4O15439 1325 aa19.16■□□□□ 0.66
GINS3-203ENST00000426538 KAT6BQ8WYB5 2073 aa19.16■□□□□ 0.66
GINS3-203ENST00000426538 PRIM1P49642 420 aaKnown RBP19.15■□□□□ 0.66
GINS3-203ENST00000426538 PELP1Q8IZL8 1130 aaKnown RBP19.15■□□□□ 0.66
GINS3-203ENST00000426538 PTCD1O75127 700 aaKnown RBP19.14■□□□□ 0.66
GINS3-203ENST00000426538 QTRT2Q9H974 415 aaKnown RBP19.14■□□□□ 0.66
GINS3-203ENST00000426538 TOGARAM1Q9Y4F4 1720 aa19.14■□□□□ 0.66
GINS3-203ENST00000426538 PHAXQ9H814 394 aaKnown RBP19.14■□□□□ 0.65
GINS3-203ENST00000426538 HYPKQ9NX55 129 aa19.14■□□□□ 0.65
GINS3-203ENST00000426538 DDX21Q9NR30 783 aaKnown RBP eCLIP19.13■□□□□ 0.65
GINS3-203ENST00000426538 ASAP1Q9ULH1 1129 aa19.13■□□□□ 0.65
GINS3-203ENST00000426538 USP16Q9Y5T5 823 aa19.13■□□□□ 0.65
GINS3-203ENST00000426538 BCL9O00512 1426 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms