RNA–Protein interactions for RNA: ENST00000426196.5

HDAC6-206, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-206ENST00000426196 FSTL1Q12841 308 aa19.93■□□□□ 0.78
HDAC6-206ENST00000426196 GGNBP2Q9H3C7 697 aa19.93■□□□□ 0.78
HDAC6-206ENST00000426196 KIF24Q5T7B8 1368 aa19.93■□□□□ 0.78
HDAC6-206ENST00000426196 FCHSD2O94868 740 aa19.92■□□□□ 0.78
HDAC6-206ENST00000426196 ATP6V1AP38606 617 aa19.92■□□□□ 0.78
HDAC6-206ENST00000426196 TNS4Q8IZW8 715 aa19.92■□□□□ 0.78
HDAC6-206ENST00000426196 TMOD3Q9NYL9 352 aa19.92■□□□□ 0.78
HDAC6-206ENST00000426196 FYB1O15117 783 aa19.91■□□□□ 0.78
HDAC6-206ENST00000426196 SLC24A1O60721 1099 aa19.91■□□□□ 0.78
HDAC6-206ENST00000426196 HTRA3P83110 453 aa19.91■□□□□ 0.78
HDAC6-206ENST00000426196 NKX1-1Q15270 411 aaPredicted RBP19.91■□□□□ 0.78
HDAC6-206ENST00000426196 CCDC87Q9NVE4 849 aa19.91■□□□□ 0.78
HDAC6-206ENST00000426196 SPG7Q9UQ90 795 aa19.91■□□□□ 0.78
HDAC6-206ENST00000426196 TMF1P82094 1093 aa19.9■□□□□ 0.78
HDAC6-206ENST00000426196 ITPK1Q13572 414 aa19.9■□□□□ 0.78
HDAC6-206ENST00000426196 C9orf131Q5VYM1 1079 aa19.9■□□□□ 0.78
HDAC6-206ENST00000426196 NLGN1Q8N2Q7 840 aa19.9■□□□□ 0.78
HDAC6-206ENST00000426196 KDM2BQ8NHM5 1336 aa19.9■□□□□ 0.78
HDAC6-206ENST00000426196 C4AP0C0L4 1744 aa19.9■□□□□ 0.78
HDAC6-206ENST00000426196 TESK2Q96S53 571 aa19.89■□□□□ 0.77
HDAC6-206ENST00000426196 ASAP1Q9ULH1 1129 aa19.89■□□□□ 0.77
HDAC6-206ENST00000426196 RTCBQ9Y3I0 505 aaKnown RBP19.89■□□□□ 0.77
HDAC6-206ENST00000426196 TNRC6CQ9HCJ0 1690 aaKnown RBP19.88■□□□□ 0.77
HDAC6-206ENST00000426196 DPEP1P16444 411 aa19.88■□□□□ 0.77
HDAC6-206ENST00000426196 PRELPP51888 382 aa19.88■□□□□ 0.77
HDAC6-206ENST00000426196 TRAPPC3LQ5T215 181 aa19.88■□□□□ 0.77
HDAC6-206ENST00000426196 KCPQ6ZWJ8 1503 aa19.86■□□□□ 0.77
HDAC6-206ENST00000426196 NCAPD2Q15021 1401 aa19.86■□□□□ 0.77
HDAC6-206ENST00000426196 PARP3Q9Y6F1 533 aa19.86■□□□□ 0.77
HDAC6-206ENST00000426196 ST20-MTHFSA0A0A6YYL1 179 aa19.85■□□□□ 0.77
HDAC6-206ENST00000426196 ADRA2BP18089 450 aa19.85■□□□□ 0.77
HDAC6-206ENST00000426196 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.84■□□□□ 0.771e-11■■□□□ 11.5
HDAC6-206ENST00000426196 ZNF831Q5JPB2 1677 aa19.84■□□□□ 0.77
HDAC6-206ENST00000426196 SBF1O95248 1867 aa19.84■□□□□ 0.77
HDAC6-206ENST00000426196 COL5A3P25940 1745 aaPredicted RBP19.83■□□□□ 0.77
HDAC6-206ENST00000426196 ATG3Q9NT62 314 aa19.83■□□□□ 0.77
HDAC6-206ENST00000426196 RNF181Q9P0P0 153 aa19.83■□□□□ 0.77
HDAC6-206ENST00000426196 PIM2Q9P1W9 311 aa19.83■□□□□ 0.77
HDAC6-206ENST00000426196 KDRP35968 1356 aa19.83■□□□□ 0.76
HDAC6-206ENST00000426196 GYS1P13807 737 aa19.82■□□□□ 0.76
HDAC6-206ENST00000426196 RFC4P35249 363 aa19.82■□□□□ 0.76
HDAC6-206ENST00000426196 IFNL2Q8IZJ0 200 aa19.82■□□□□ 0.76
HDAC6-206ENST00000426196 SMC1BQ8NDV3 1235 aa19.82■□□□□ 0.76
HDAC6-206ENST00000426196 ARHGEF1Q92888 912 aaKnown RBP19.82■□□□□ 0.76
HDAC6-206ENST00000426196 RRAGCQ9HB90 399 aa19.82■□□□□ 0.76
HDAC6-206ENST00000426196 TONSLQ96HA7 1378 aa19.82■□□□□ 0.76
HDAC6-206ENST00000426196 PHKG2P15735 406 aa19.81■□□□□ 0.76
HDAC6-206ENST00000426196 DALRD3Q5D0E6 543 aaKnown RBP19.81■□□□□ 0.76
HDAC6-206ENST00000426196 RC3H1Q5TC82 1133 aaKnown RBP19.81■□□□□ 0.76
HDAC6-206ENST00000426196 DCAF5Q96JK2 942 aa19.81■□□□□ 0.76
HDAC6-206ENST00000426196 EMILIN1Q9Y6C2 1016 aa19.81■□□□□ 0.76
HDAC6-206ENST00000426196 ANKRD26Q9UPS8 1709 aa19.81■□□□□ 0.76
HDAC6-206ENST00000426196 KCNA3P22001 575 aa19.8■□□□□ 0.76
HDAC6-206ENST00000426196 CNTNAP4Q9C0A0 1308 aa19.79■□□□□ 0.76
HDAC6-206ENST00000426196 MYH14Q7Z406 1995 aaKnown RBP19.79■□□□□ 0.76
HDAC6-206ENST00000426196 PPM1GO15355 546 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-206ENST00000426196 RBM42Q9BTD8 480 aaKnown RBP19.79■□□□□ 0.76
HDAC6-206ENST00000426196 RPS6KA4O75676 772 aa19.77■□□□□ 0.76
HDAC6-206ENST00000426196 EYA1Q99502 592 aa19.77■□□□□ 0.76
HDAC6-206ENST00000426196 HSPA1AP0DMV8 641 aaKnown RBP19.76■□□□□ 0.75
HDAC6-206ENST00000426196 HSPA1BP0DMV9 641 aaKnown RBP19.76■□□□□ 0.75
HDAC6-206ENST00000426196 SLC4A9Q96Q91 983 aa19.75■□□□□ 0.75
HDAC6-206ENST00000426196 WASHC2AQ641Q2 1341 aa19.75■□□□□ 0.75
HDAC6-206ENST00000426196 ZC3H4Q9UPT8 1303 aaKnown RBP19.75■□□□□ 0.75
HDAC6-206ENST00000426196 ERVV-2B6SEH9 535 aa19.73■□□□□ 0.75
HDAC6-206ENST00000426196 CDCA8Q53HL2 280 aa19.72■□□□□ 0.75
HDAC6-206ENST00000426196 HSP90AB1P08238 724 aaKnown RBP19.71■□□□□ 0.75
HDAC6-206ENST00000426196 CHRNA5P30532 468 aa19.71■□□□□ 0.75
HDAC6-206ENST00000426196 CCDC88AQ3V6T2 1871 aa19.71■□□□□ 0.75
HDAC6-206ENST00000426196 VEGFAP15692 232 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-206ENST00000426196 DDR1Q08345 913 aa19.69■□□□□ 0.74
HDAC6-206ENST00000426196 FKBP8Q14318 412 aa19.69■□□□□ 0.74
HDAC6-206ENST00000426196 SRP68Q9UHB9 627 aaKnown RBP19.69■□□□□ 0.74
HDAC6-206ENST00000426196 USP42Q9H9J4 1324 aaKnown RBP19.69■□□□□ 0.74
HDAC6-206ENST00000426196 TIAM2Q8IVF5 1701 aa19.68■□□□□ 0.74
HDAC6-206ENST00000426196 CRKLP46109 303 aaKnown RBP19.68■□□□□ 0.74
HDAC6-206ENST00000426196 RASSF7Q02833 373 aa19.68■□□□□ 0.74
HDAC6-206ENST00000426196 KDM6AO15550 1401 aaPredicted RBP19.68■□□□□ 0.74
HDAC6-206ENST00000426196 GLTPD2A6NH11 291 aa19.67■□□□□ 0.74
HDAC6-206ENST00000426196 LMNB1P20700 586 aa19.67■□□□□ 0.74
HDAC6-206ENST00000426196 CABP4P57796 275 aa19.67■□□□□ 0.74
HDAC6-206ENST00000426196 CARD14Q9BXL6 1004 aa19.67■□□□□ 0.74
HDAC6-206ENST00000426196 PTCD1O75127 700 aaKnown RBP19.66■□□□□ 0.74
HDAC6-206ENST00000426196 DLEC1Q9Y238 1755 aa19.65■□□□□ 0.74
HDAC6-206ENST00000426196 AFDNP55196 1824 aaKnown RBP19.65■□□□□ 0.74
HDAC6-206ENST00000426196 POLRMTO00411 1230 aaKnown RBP19.65■□□□□ 0.74
HDAC6-206ENST00000426196 TJP1Q07157 1748 aa19.65■□□□□ 0.74
HDAC6-206ENST00000426196 EIF4A2Q14240 407 aaKnown RBP19.64■□□□□ 0.73
HDAC6-206ENST00000426196 POLKQ9UBT6 870 aa19.64■□□□□ 0.73
HDAC6-206ENST00000426196 ZPR1O75312 459 aa19.63■□□□□ 0.73
HDAC6-206ENST00000426196 PLEKHO1Q53GL0 409 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-206ENST00000426196 ZNF530Q6P9A1 599 aaPredicted RBP19.63■□□□□ 0.73
HDAC6-206ENST00000426196 ADAMTS7Q9UKP4 1686 aa19.62■□□□□ 0.73
HDAC6-206ENST00000426196 TM4SF1P30408 202 aa19.61■□□□□ 0.73
HDAC6-206ENST00000426196 AMOTQ4VCS5 1084 aa19.61■□□□□ 0.73
HDAC6-206ENST00000426196 MTHFSP49914 203 aa19.6■□□□□ 0.73
HDAC6-206ENST00000426196 NRXN2Q9P2S2 1712 aa19.59■□□□□ 0.73
HDAC6-206ENST00000426196 DICER1Q9UPY3 1922 aaKnown RBP19.59■□□□□ 0.73
HDAC6-206ENST00000426196 C1orf141Q5JVX7 400 aa19.59■□□□□ 0.73
HDAC6-206ENST00000426196 DPY19L2Q6NUT2 758 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms