RNA–Protein interactions for RNA: ENST00000424549.7

NPIPA1-202, Transcript of nuclear pore complex interacting protein family member A1, humanhuman

TSL 3

Gene NPIPA1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1-202ENST00000424549 AMIGO3Q86WK7 504 aa10.22□□□□□ -0.77
NPIPA1-202ENST00000424549 BCS1LQ9Y276 419 aa10.22□□□□□ -0.77
NPIPA1-202ENST00000424549 NSD2O96028 1365 aa10.22□□□□□ -0.77
NPIPA1-202ENST00000424549 SBF1O95248 1867 aa10.21□□□□□ -0.77
NPIPA1-202ENST00000424549 CCNL1Q9UK58 526 aaPredicted RBP10.21□□□□□ -0.77
NPIPA1-202ENST00000424549 CCDC7Q96M83 1385 aa10.21□□□□□ -0.78
NPIPA1-202ENST00000424549 VIRMAQ69YN4 1812 aaKnown RBP10.21□□□□□ -0.78
NPIPA1-202ENST00000424549 KDM2BQ8NHM5 1336 aa10.2□□□□□ -0.78
NPIPA1-202ENST00000424549 ARFGEF1Q9Y6D6 1849 aa10.2□□□□□ -0.78
NPIPA1-202ENST00000424549 UBR3Q6ZT12 1888 aa10.19□□□□□ -0.78
NPIPA1-202ENST00000424549 CD44P16070 742 aaKnown RBP10.19□□□□□ -0.78
NPIPA1-202ENST00000424549 SYTL4Q96C24 671 aaPredicted RBP10.19□□□□□ -0.78
NPIPA1-202ENST00000424549 SOX12O15370 315 aa10.18□□□□□ -0.78
NPIPA1-202ENST00000424549 HSPA8P11142 646 aaKnown RBP10.18□□□□□ -0.78
NPIPA1-202ENST00000424549 NLRP6P59044 892 aa10.18□□□□□ -0.78
NPIPA1-202ENST00000424549 A0A0G2JLW4 131 aa10.17□□□□□ -0.78
NPIPA1-202ENST00000424549 PLEKHG3A1L390 1219 aa10.17□□□□□ -0.78
NPIPA1-202ENST00000424549 PRIM1P49642 420 aaKnown RBP10.17□□□□□ -0.78
NPIPA1-202ENST00000424549 MNX1P50219 401 aaPredicted RBP10.17□□□□□ -0.78
NPIPA1-202ENST00000424549 ARHGEF25Q86VW2 580 aa10.17□□□□□ -0.78
NPIPA1-202ENST00000424549 AIDAQ96BJ3 306 aa10.17□□□□□ -0.78
NPIPA1-202ENST00000424549 RNF181Q9P0P0 153 aa10.17□□□□□ -0.78
NPIPA1-202ENST00000424549 C4BP0C0L5 1744 aa10.16□□□□□ -0.78
NPIPA1-202ENST00000424549 CNTNAP1P78357 1384 aa10.16□□□□□ -0.78
NPIPA1-202ENST00000424549 CDK19Q9BWU1 502 aa10.16□□□□□ -0.78
NPIPA1-202ENST00000424549 NFAT5O94916 1531 aa10.16□□□□□ -0.78
NPIPA1-202ENST00000424549 LOC105371045A0A1W2PR82 267 aa10.15□□□□□ -0.78
NPIPA1-202ENST00000424549 FCHSD2O94868 740 aa10.15□□□□□ -0.78
NPIPA1-202ENST00000424549 IL2RBP14784 551 aa10.15□□□□□ -0.78
NPIPA1-202ENST00000424549 WBP1LQ9NX94 342 aa10.15□□□□□ -0.78
NPIPA1-202ENST00000424549 CCDC61Q9Y6R9 512 aa10.15□□□□□ -0.78
NPIPA1-202ENST00000424549 ANKRD36BQ8N2N9 1353 aa10.14□□□□□ -0.79
NPIPA1-202ENST00000424549 PHF14O94880 888 aa10.14□□□□□ -0.79
NPIPA1-202ENST00000424549 DDX54Q8TDD1 881 aaKnown RBP10.14□□□□□ -0.79
NPIPA1-202ENST00000424549 TIAM2Q8IVF5 1701 aa10.13□□□□□ -0.79
NPIPA1-202ENST00000424549 DPEP1P16444 411 aa10.13□□□□□ -0.79
NPIPA1-202ENST00000424549 VEGFBP49765 207 aa10.13□□□□□ -0.79
NPIPA1-202ENST00000424549 NLRP2Q9NX02 1062 aa10.13□□□□□ -0.79
NPIPA1-202ENST00000424549 MIER1Q8N108 512 aa10.12□□□□□ -0.79
NPIPA1-202ENST00000424549 CCDC88AQ3V6T2 1871 aa10.11□□□□□ -0.79
NPIPA1-202ENST00000424549 FLAD1Q8NFF5 587 aa10.11□□□□□ -0.79
NPIPA1-202ENST00000424549 POTECB2RU33 542 aa10.1□□□□□ -0.79
NPIPA1-202ENST00000424549 GABBR2O75899 941 aa10.1□□□□□ -0.79
NPIPA1-202ENST00000424549 MMP10P09238 476 aa10.1□□□□□ -0.79
NPIPA1-202ENST00000424549 VEGFAP15692 232 aaPredicted RBP10.1□□□□□ -0.79
NPIPA1-202ENST00000424549 RASSF7Q02833 373 aa10.1□□□□□ -0.79
NPIPA1-202ENST00000424549 LTN1O94822 1766 aa10.1□□□□□ -0.79
NPIPA1-202ENST00000424549 USP47Q96K76 1375 aa10.1□□□□□ -0.79
NPIPA1-202ENST00000424549 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.09□□□□□ -0.79
NPIPA1-202ENST00000424549 POTEIP0CG38 1075 aa10.09□□□□□ -0.79
NPIPA1-202ENST00000424549 POTEJP0CG39 1038 aa10.09□□□□□ -0.79
NPIPA1-202ENST00000424549 KCNA3P22001 575 aa10.09□□□□□ -0.79
NPIPA1-202ENST00000424549 TGFB2P61812 414 aa10.08□□□□□ -0.8
NPIPA1-202ENST00000424549 PRPF38BQ5VTL8 546 aaKnown RBP10.08□□□□□ -0.8
NPIPA1-202ENST00000424549 DCAF5Q96JK2 942 aa10.08□□□□□ -0.8
NPIPA1-202ENST00000424549 CUL9Q8IWT3 2517 aa10.08□□□□□ -0.8
NPIPA1-202ENST00000424549 C4AP0C0L4 1744 aa10.07□□□□□ -0.8
NPIPA1-202ENST00000424549 CASP8AP2Q9UKL3 1982 aa10.07□□□□□ -0.8
NPIPA1-202ENST00000424549 AK7Q96M32 723 aa10.07□□□□□ -0.8
NPIPA1-202ENST00000424549 KDM6AO15550 1401 aaPredicted RBP10.07□□□□□ -0.8
NPIPA1-202ENST00000424549 PALLDQ8WX93 1383 aa10.06□□□□□ -0.8
NPIPA1-202ENST00000424549 GLTPD2A6NH11 291 aa10.06□□□□□ -0.8
NPIPA1-202ENST00000424549 PLCD3Q8N3E9 789 aa10.06□□□□□ -0.8
NPIPA1-202ENST00000424549 MCOLN1Q9GZU1 580 aa10.06□□□□□ -0.8
NPIPA1-202ENST00000424549 PODXL2Q9NZ53 605 aa10.06□□□□□ -0.8
NPIPA1-202ENST00000424549 TSKSQ9UJT2 592 aa10.06□□□□□ -0.8
NPIPA1-202ENST00000424549 RGPD2P0DJD1 1756 aa10.06□□□□□ -0.8
NPIPA1-202ENST00000424549 LTBP1Q14766 1721 aa10.05□□□□□ -0.8
NPIPA1-202ENST00000424549 ANKRD24Q8TF21 1146 aa10.05□□□□□ -0.8
NPIPA1-202ENST00000424549 CABP2Q9NPB3 220 aa10.05□□□□□ -0.8
NPIPA1-202ENST00000424549 FAM208AQ9UK61 1670 aaKnown RBP10.05□□□□□ -0.8
NPIPA1-202ENST00000424549 MAP2P11137 1827 aaKnown RBP10.05□□□□□ -0.8
NPIPA1-202ENST00000424549 THSD7BQ9C0I4 1608 aa10.04□□□□□ -0.8
NPIPA1-202ENST00000424549 KCNH5Q8NCM2 988 aa10.04□□□□□ -0.8
NPIPA1-202ENST00000424549 PASKQ96RG2 1323 aa10.04□□□□□ -0.8
NPIPA1-202ENST00000424549 SOX10P56693 466 aa10.03□□□□□ -0.8
NPIPA1-202ENST00000424549 ZNF579Q8NAF0 562 aaKnown RBP10.03□□□□□ -0.8
NPIPA1-202ENST00000424549 CABP1Q9NZU7 370 aa10.03□□□□□ -0.8
NPIPA1-202ENST00000424549 ITGB4P16144 1822 aa10.03□□□□□ -0.8
NPIPA1-202ENST00000424549 MEGF6O75095 1541 aa10.02□□□□□ -0.8
NPIPA1-202ENST00000424549 SSFA2P28290 1259 aa10.02□□□□□ -0.81
NPIPA1-202ENST00000424549 SRPK2P78362 688 aaKnown RBP10.02□□□□□ -0.81
NPIPA1-202ENST00000424549 HS6ST3Q8IZP7 471 aa10.02□□□□□ -0.81
NPIPA1-202ENST00000424549 LINC00116Q8NCU8 138 aa10.02□□□□□ -0.81
NPIPA1-202ENST00000424549 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
NPIPA1-202ENST00000424549 TTC21BQ7Z4L5 1316 aa10.02□□□□□ -0.81
NPIPA1-202ENST00000424549 ZC3H4Q9UPT8 1303 aaKnown RBP10.02□□□□□ -0.81
NPIPA1-202ENST00000424549 NSD3Q9BZ95 1437 aa10.01□□□□□ -0.81
NPIPA1-202ENST00000424549 CHRNA5P30532 468 aa10.01□□□□□ -0.81
NPIPA1-202ENST00000424549 DALRD3Q5D0E6 543 aaKnown RBP10.01□□□□□ -0.81
NPIPA1-202ENST00000424549 PIM2Q9P1W9 311 aa10.01□□□□□ -0.81
NPIPA1-202ENST00000424549 GNPATO15228 680 aa10□□□□□ -0.81
NPIPA1-202ENST00000424549 CCDC87Q9NVE4 849 aa10□□□□□ -0.81
NPIPA1-202ENST00000424549 WDR33Q9C0J8 1336 aaKnown RBP10□□□□□ -0.81
NPIPA1-202ENST00000424549 TMEM88BA6NKF7 163 aa9.99□□□□□ -0.81
NPIPA1-202ENST00000424549 MAP2K1Q02750 393 aaPredicted RBP9.99□□□□□ -0.81
NPIPA1-202ENST00000424549 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
NPIPA1-202ENST00000424549 LMNB1P20700 586 aa9.98□□□□□ -0.81
NPIPA1-202ENST00000424549 LTV1Q96GA3 475 aaPredicted RBP9.98□□□□□ -0.81
NPIPA1-202ENST00000424549 PHF12Q96QT6 1004 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms