RNA–Protein interactions for RNA: ENST00000423327.2

SPC24-201, Transcript of SPC24, NDC80 kinetochore complex component, humanhuman

TSL 2

Gene SPC24, Length 840 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC24-201ENST00000423327 SLC4A9Q96Q91 983 aa20.92■□□□□ 0.94
SPC24-201ENST00000423327 C1orf141Q5JVX7 400 aa20.91■□□□□ 0.94
SPC24-201ENST00000423327 SMIM5Q71RC9 77 aa20.91■□□□□ 0.94
SPC24-201ENST00000423327 SLC16A10Q8TF71 515 aa20.91■□□□□ 0.94
SPC24-201ENST00000423327 PPP2R1AP30153 589 aa20.9■□□□□ 0.94
SPC24-201ENST00000423327 FHDC1Q9C0D6 1143 aaPredicted RBP20.9■□□□□ 0.94
SPC24-201ENST00000423327 MTHFSDQ2M296 383 aaKnown RBP20.89■□□□□ 0.93
SPC24-201ENST00000423327 AKAP4Q5JQC9 854 aa20.89■□□□□ 0.93
SPC24-201ENST00000423327 ARXQ96QS3 562 aa20.88■□□□□ 0.93
SPC24-201ENST00000423327 CICQ96RK0 1608 aaPredicted RBP20.88■□□□□ 0.93
SPC24-201ENST00000423327 TJP1Q07157 1748 aa20.87■□□□□ 0.93
SPC24-201ENST00000423327 ATP6V1AP38606 617 aa20.87■□□□□ 0.93
SPC24-201ENST00000423327 CABP4P57796 275 aa20.87■□□□□ 0.93
SPC24-201ENST00000423327 LGR6Q9HBX8 967 aa20.87■□□□□ 0.93
SPC24-201ENST00000423327 MAP3K5Q99683 1374 aa20.86■□□□□ 0.93
SPC24-201ENST00000423327 U2SURPO15042 1029 aaKnown RBP20.86■□□□□ 0.93
SPC24-201ENST00000423327 NFATC2IPQ8NCF5 419 aa20.86■□□□□ 0.93
SPC24-201ENST00000423327 AK7Q96M32 723 aa20.86■□□□□ 0.93
SPC24-201ENST00000423327 SYT17Q9BSW7 474 aa20.86■□□□□ 0.93
SPC24-201ENST00000423327 MYH14Q7Z406 1995 aaKnown RBP20.86■□□□□ 0.93
SPC24-201ENST00000423327 MSL1Q68DK7 614 aa20.85■□□□□ 0.93
SPC24-201ENST00000423327 RNMTO43148 476 aaKnown RBP20.84■□□□□ 0.93
SPC24-201ENST00000423327 MSH5O43196 834 aa20.84■□□□□ 0.93
SPC24-201ENST00000423327 UTRNP46939 3433 aa20.84■□□□□ 0.93
SPC24-201ENST00000423327 PHF14O94880 888 aa20.83■□□□□ 0.93
SPC24-201ENST00000423327 RBM42Q9BTD8 480 aaKnown RBP20.83■□□□□ 0.93
SPC24-201ENST00000423327 SLC52A2Q9HAB3 445 aa20.83■□□□□ 0.93
SPC24-201ENST00000423327 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.82■□□□□ 0.92
SPC24-201ENST00000423327 SSFA2P28290 1259 aa20.82■□□□□ 0.92
SPC24-201ENST00000423327 RSPH6AQ9H0K4 717 aa20.82■□□□□ 0.92
SPC24-201ENST00000423327 KCPQ6ZWJ8 1503 aa20.82■□□□□ 0.92
SPC24-201ENST00000423327 SIPA1L3O60292 1781 aaPredicted RBP20.82■□□□□ 0.92
SPC24-201ENST00000423327 GNPATO15228 680 aa20.81■□□□□ 0.92
SPC24-201ENST00000423327 POLD1P28340 1107 aa20.81■□□□□ 0.92
SPC24-201ENST00000423327 FLAD1Q8NFF5 587 aa20.81■□□□□ 0.92
SPC24-201ENST00000423327 CFAP53Q96M91 514 aa20.81■□□□□ 0.92
SPC24-201ENST00000423327 UBR2Q8IWV8 1755 aa20.81■□□□□ 0.92
SPC24-201ENST00000423327 C4AP0C0L4 1744 aa20.81■□□□□ 0.92
SPC24-201ENST00000423327 PTCD1O75127 700 aaKnown RBP20.8■□□□□ 0.92
SPC24-201ENST00000423327 HMGB2P26583 209 aaKnown RBP20.8■□□□□ 0.92
SPC24-201ENST00000423327 PHACTR3Q96KR7 559 aa20.8■□□□□ 0.92
SPC24-201ENST00000423327 PRKAR2BP31323 418 aa20.79■□□□□ 0.92
SPC24-201ENST00000423327 CNTNAP4Q9C0A0 1308 aa20.78■□□□□ 0.92
SPC24-201ENST00000423327 SLC39A6Q13433 755 aa20.78■□□□□ 0.92
SPC24-201ENST00000423327 IL17REQ8NFR9 667 aa20.76■□□□□ 0.91
SPC24-201ENST00000423327 NLGN2Q8NFZ4 835 aa20.76■□□□□ 0.91
SPC24-201ENST00000423327 GAS2L2Q8NHY3 880 aa20.76■□□□□ 0.91
SPC24-201ENST00000423327 RC3H1Q5TC82 1133 aaKnown RBP20.75■□□□□ 0.91
SPC24-201ENST00000423327 CEMIPQ8WUJ3 1361 aa20.74■□□□□ 0.91
SPC24-201ENST00000423327 U2AF1L5P0DN76 240 aaPredicted RBP20.74■□□□□ 0.91
SPC24-201ENST00000423327 U2AF1Q01081 240 aaKnown RBP eCLIP20.74■□□□□ 0.917e-7■■□□□ 13.3
SPC24-201ENST00000423327 KLHL34Q8N239 644 aa20.74■□□□□ 0.91
SPC24-201ENST00000423327 NUDCQ9Y266 331 aa20.74■□□□□ 0.91
SPC24-201ENST00000423327 GOLGB1Q14789 3259 aaKnown RBP20.73■□□□□ 0.91
SPC24-201ENST00000423327 GNAT3A8MTJ3 354 aa20.73■□□□□ 0.91
SPC24-201ENST00000423327 CRKLP46109 303 aaKnown RBP20.73■□□□□ 0.91
SPC24-201ENST00000423327 RTCBQ9Y3I0 505 aaKnown RBP20.73■□□□□ 0.91
SPC24-201ENST00000423327 RPS6KA4O75676 772 aa20.72■□□□□ 0.91
SPC24-201ENST00000423327 DDX10Q13206 875 aaKnown RBP20.72■□□□□ 0.91
SPC24-201ENST00000423327 DNAJC10Q8IXB1 793 aa20.72■□□□□ 0.91
SPC24-201ENST00000423327 ARHGEF1Q92888 912 aaKnown RBP20.71■□□□□ 0.91
SPC24-201ENST00000423327 FCHSD2O94868 740 aa20.7■□□□□ 0.9
SPC24-201ENST00000423327 INTS5Q6P9B9 1019 aaKnown RBP20.7■□□□□ 0.9
SPC24-201ENST00000423327 DLG5Q8TDM6 1919 aa20.69■□□□□ 0.9
SPC24-201ENST00000423327 ADRA2BP18089 450 aa20.69■□□□□ 0.9
SPC24-201ENST00000423327 TRAPPC3LQ5T215 181 aa20.69■□□□□ 0.9
SPC24-201ENST00000423327 KIAA1551Q9HCM1 1747 aa20.67■□□□□ 0.9
SPC24-201ENST00000423327 KIF13BQ9NQT8 1826 aa20.67■□□□□ 0.9
SPC24-201ENST00000423327 CYP19A1P11511 503 aaPredicted RBP20.67■□□□□ 0.9
SPC24-201ENST00000423327 GYS1P13807 737 aa20.67■□□□□ 0.9
SPC24-201ENST00000423327 TEFQ10587 303 aa20.66■□□□□ 0.9
SPC24-201ENST00000423327 PLEKHF1Q96S99 279 aa20.66■□□□□ 0.9
SPC24-201ENST00000423327 SRP68Q9UHB9 627 aaKnown RBP20.66■□□□□ 0.9
SPC24-201ENST00000423327 SOS1Q07889 1333 aaPredicted RBP20.65■□□□□ 0.9
SPC24-201ENST00000423327 DCAF8L1A6NGE4 600 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 MMP10P09238 476 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 RALBP1Q15311 655 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 ZNF790Q6PG37 636 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 MCM10Q7L590 875 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 ZNF496Q96IT1 587 aaPredicted RBP20.65■□□□□ 0.9
SPC24-201ENST00000423327 CCDC87Q9NVE4 849 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 ZBTB1Q9Y2K1 713 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 CD2APQ9Y5K6 639 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 CHD4Q14839 1912 aa20.65■□□□□ 0.9
SPC24-201ENST00000423327 USP42Q9H9J4 1324 aaKnown RBP20.64■□□□□ 0.89
SPC24-201ENST00000423327 KCNQ3O43525 872 aa20.64■□□□□ 0.89
SPC24-201ENST00000423327 YY1P25490 414 aa20.64■□□□□ 0.89
SPC24-201ENST00000423327 DCTN1Q14203 1278 aa20.64■□□□□ 0.89
SPC24-201ENST00000423327 HEG1Q9ULI3 1381 aa20.63■□□□□ 0.89
SPC24-201ENST00000423327 YBX3P16989 372 aaKnown RBP eCLIP20.63■□□□□ 0.89
SPC24-201ENST00000423327 RFC4P35249 363 aa20.63■□□□□ 0.89
SPC24-201ENST00000423327 TTC5Q8N0Z6 440 aa20.62■□□□□ 0.89
SPC24-201ENST00000423327 C10orf71Q711Q0 1435 aa20.61■□□□□ 0.89
SPC24-201ENST00000423327 GPR162Q16538 588 aa20.61■□□□□ 0.89
SPC24-201ENST00000423327 COL15A1P39059 1388 aa20.6■□□□□ 0.89
SPC24-201ENST00000423327 MYBBP1AQ9BQG0 1328 aaKnown RBP20.6■□□□□ 0.89
SPC24-201ENST00000423327 FKBP8Q14318 412 aa20.6■□□□□ 0.89
SPC24-201ENST00000423327 NLGN1Q8N2Q7 840 aa20.6■□□□□ 0.89
SPC24-201ENST00000423327 PXDNLA1KZ92 1463 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms