RNA–Protein interactions for RNA: ENST00000422939.1

TRPS1-204, Transcript of transcriptional repressor GATA binding 1, humanhuman

TSL 2

Gene TRPS1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPS1-204ENST00000422939 USP17L2Q6R6M4 530 aa11.63□□□□□ -0.55
TRPS1-204ENST00000422939 USP17L1Q7RTZ2 530 aa11.63□□□□□ -0.55
TRPS1-204ENST00000422939 VWA5B2Q8N398 1253 aa11.63□□□□□ -0.55
TRPS1-204ENST00000422939 GPR161Q8N6U8 529 aaKnown RBP11.63□□□□□ -0.55
TRPS1-204ENST00000422939 INSM1Q01101 510 aaPredicted RBP11.62□□□□□ -0.55
TRPS1-204ENST00000422939 SV2AQ7L0J3 742 aa11.62□□□□□ -0.55
TRPS1-204ENST00000422939 TRIM50Q86XT4 487 aa11.62□□□□□ -0.55
TRPS1-204ENST00000422939 PPARGC1BQ86YN6 1023 aaKnown RBP11.62□□□□□ -0.55
TRPS1-204ENST00000422939 TIMMDC1Q9NPL8 285 aa11.62□□□□□ -0.55
TRPS1-204ENST00000422939 TFIP11Q9UBB9 837 aaKnown RBP11.62□□□□□ -0.55
TRPS1-204ENST00000422939 SMTNP53814 917 aa11.61□□□□□ -0.55
TRPS1-204ENST00000422939 GNASQ5JWF2 1037 aa11.61□□□□□ -0.55
TRPS1-204ENST00000422939 SLC4A9Q96Q91 983 aa11.61□□□□□ -0.55
TRPS1-204ENST00000422939 CDC14CA4D256 554 aa11.6□□□□□ -0.55
TRPS1-204ENST00000422939 GMCL1Q96IK5 515 aa11.6□□□□□ -0.55
TRPS1-204ENST00000422939 GAS2L1Q99501 681 aaPredicted RBP11.6□□□□□ -0.55
TRPS1-204ENST00000422939 CUEDC1Q9NWM3 386 aaPredicted RBP11.6□□□□□ -0.55
TRPS1-204ENST00000422939 SERTAD1Q9UHV2 236 aa11.6□□□□□ -0.55
TRPS1-204ENST00000422939 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
TRPS1-204ENST00000422939 PSME1Q06323 249 aa11.59□□□□□ -0.55
TRPS1-204ENST00000422939 C4orf17Q53FE4 359 aa11.59□□□□□ -0.55
TRPS1-204ENST00000422939 RHBDD1Q8TEB9 315 aa11.59□□□□□ -0.55
TRPS1-204ENST00000422939 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
TRPS1-204ENST00000422939 PALM3A6NDB9 673 aaPredicted RBP11.58□□□□□ -0.56
TRPS1-204ENST00000422939 BACH1O14867 736 aa11.58□□□□□ -0.56
TRPS1-204ENST00000422939 ZBTB7BO15156 539 aaPredicted RBP11.58□□□□□ -0.56
TRPS1-204ENST00000422939 PHKA2P46019 1235 aa11.58□□□□□ -0.56
TRPS1-204ENST00000422939 ATP1A2P50993 1020 aa11.58□□□□□ -0.56
TRPS1-204ENST00000422939 RIPOR1Q6ZS17 1223 aa11.58□□□□□ -0.56
TRPS1-204ENST00000422939 TRIM22Q8IYM9 498 aa11.58□□□□□ -0.56
TRPS1-204ENST00000422939 PPP1R12CQ9BZL4 782 aa11.58□□□□□ -0.56
TRPS1-204ENST00000422939 MAFBQ9Y5Q3 323 aaPredicted RBP11.58□□□□□ -0.56
TRPS1-204ENST00000422939 F11P03951 625 aa11.57□□□□□ -0.56
TRPS1-204ENST00000422939 MTFR1Q15390 333 aa11.57□□□□□ -0.56
TRPS1-204ENST00000422939 DBN1Q16643 649 aa11.57□□□□□ -0.56
TRPS1-204ENST00000422939 ZMYND15Q9H091 742 aa11.57□□□□□ -0.56
TRPS1-204ENST00000422939 A6NJY4 79 aa11.56□□□□□ -0.56
TRPS1-204ENST00000422939 H7C1W4 665 aa11.56□□□□□ -0.56
TRPS1-204ENST00000422939 CDK2AP1O14519 115 aa11.56□□□□□ -0.56
TRPS1-204ENST00000422939 CLDN10P78369 228 aa11.56□□□□□ -0.56
TRPS1-204ENST00000422939 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.56□□□□□ -0.56
TRPS1-204ENST00000422939 ZNF358Q9NW07 568 aa11.56□□□□□ -0.56
TRPS1-204ENST00000422939 A0A1B0GTH6 734 aa11.55□□□□□ -0.56
TRPS1-204ENST00000422939 LARGE2Q8N3Y3 721 aa11.55□□□□□ -0.56
TRPS1-204ENST00000422939 OGFOD1Q8N543 542 aa11.55□□□□□ -0.56
TRPS1-204ENST00000422939 ZNF837Q96EG3 531 aaPredicted RBP11.55□□□□□ -0.56
TRPS1-204ENST00000422939 COL25A1Q9BXS0 654 aaPredicted RBP11.55□□□□□ -0.56
TRPS1-204ENST00000422939 DNAAF2Q9NVR5 837 aaKnown RBP11.55□□□□□ -0.56
TRPS1-204ENST00000422939 NIFKQ9BYG3 293 aaKnown RBP11.54□□□□□ -0.56
TRPS1-204ENST00000422939 LORP23490 312 aaPredicted RBP11.53□□□□□ -0.56
TRPS1-204ENST00000422939 KRT76Q01546 638 aa11.53□□□□□ -0.56
TRPS1-204ENST00000422939 CCDC102BQ68D86 513 aa11.53□□□□□ -0.56
TRPS1-204ENST00000422939 TPCN2Q8NHX9 752 aa11.53□□□□□ -0.56
TRPS1-204ENST00000422939 CNTNAP3BQ96NU0 1288 aa11.53□□□□□ -0.56
TRPS1-204ENST00000422939 CNTNAP3Q9BZ76 1288 aa11.53□□□□□ -0.56
TRPS1-204ENST00000422939 IQSEC3Q9UPP2 1182 aaPredicted RBP11.53□□□□□ -0.56
TRPS1-204ENST00000422939 KIAA1024Q9UPX6 916 aa11.53□□□□□ -0.56
TRPS1-204ENST00000422939 ZSCAN1Q8NBB4 408 aa11.52□□□□□ -0.57
TRPS1-204ENST00000422939 RNFT1Q5M7Z0 435 aa11.51□□□□□ -0.57
TRPS1-204ENST00000422939 FOXR1Q6PIV2 292 aa11.51□□□□□ -0.57
TRPS1-204ENST00000422939 ZNF295-AS1Q8N0V1 137 aa11.51□□□□□ -0.57
TRPS1-204ENST00000422939 SCHIP1Q9P0W5 487 aaPredicted RBP11.51□□□□□ -0.57
TRPS1-204ENST00000422939 MSX1P28360 303 aa11.5□□□□□ -0.57
TRPS1-204ENST00000422939 LMOD1P29536 600 aaPredicted RBP11.5□□□□□ -0.57
TRPS1-204ENST00000422939 SIX5Q8N196 739 aa11.5□□□□□ -0.57
TRPS1-204ENST00000422939 NUCKS1Q9H1E3 243 aaKnown RBP11.5□□□□□ -0.57
TRPS1-204ENST00000422939 GPAMQ9HCL2 828 aa11.5□□□□□ -0.57
TRPS1-204ENST00000422939 STK17AQ9UEE5 414 aa11.5□□□□□ -0.57
TRPS1-204ENST00000422939 RASA1P20936 1047 aa11.49□□□□□ -0.57
TRPS1-204ENST00000422939 PLA2G4AP47712 749 aa11.49□□□□□ -0.57
TRPS1-204ENST00000422939 EPHA4P54764 986 aa11.49□□□□□ -0.57
TRPS1-204ENST00000422939 KANK4Q5T7N3 995 aaPredicted RBP11.49□□□□□ -0.57
TRPS1-204ENST00000422939 USP3Q9Y6I4 520 aa11.49□□□□□ -0.57
TRPS1-204ENST00000422939 M0R2N6 131 aa11.48□□□□□ -0.57
TRPS1-204ENST00000422939 DKK1O94907 266 aa11.48□□□□□ -0.57
TRPS1-204ENST00000422939 FOXK2Q01167 660 aa11.48□□□□□ -0.57
TRPS1-204ENST00000422939 TNS4Q8IZW8 715 aa11.48□□□□□ -0.57
TRPS1-204ENST00000422939 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
TRPS1-204ENST00000422939 ZNF594Q96JF6 807 aaPredicted RBP11.48□□□□□ -0.57
TRPS1-204ENST00000422939 CSB-PGBD3P0DP91 1061 aa11.47□□□□□ -0.57
TRPS1-204ENST00000422939 LBRQ14739 615 aaKnown RBP11.47□□□□□ -0.57
TRPS1-204ENST00000422939 PGBD3Q8N328 593 aa11.47□□□□□ -0.57
TRPS1-204ENST00000422939 C1orf216Q8TAB5 229 aa11.47□□□□□ -0.57
TRPS1-204ENST00000422939 AIDAQ96BJ3 306 aa11.47□□□□□ -0.57
TRPS1-204ENST00000422939 VRTNQ9H8Y1 702 aa11.47□□□□□ -0.57
TRPS1-204ENST00000422939 CABP1Q9NZU7 370 aa11.47□□□□□ -0.57
TRPS1-204ENST00000422939 RBM19Q9Y4C8 960 aaKnown RBP11.47□□□□□ -0.57
TRPS1-204ENST00000422939 GAS6Q14393 721 aa11.46□□□□□ -0.57
TRPS1-204ENST00000422939 CFAP70Q5T0N1 1121 aa11.46□□□□□ -0.57
TRPS1-204ENST00000422939 LARP1Q6PKG0 1096 aaKnown RBP11.46□□□□□ -0.57
TRPS1-204ENST00000422939 TRERF1Q96PN7 1200 aa11.46□□□□□ -0.57
TRPS1-204ENST00000422939 RUBCNLQ9H714 662 aa11.46□□□□□ -0.57
TRPS1-204ENST00000422939 GPR25O00155 361 aa11.45□□□□□ -0.58
TRPS1-204ENST00000422939 THBS1P07996 1170 aa11.45□□□□□ -0.58
TRPS1-204ENST00000422939 CRISPLD1Q9H336 500 aa11.45□□□□□ -0.58
TRPS1-204ENST00000422939 TEAD4Q15561 434 aa11.44□□□□□ -0.58
TRPS1-204ENST00000422939 NBPF1Q3BBV0 1214 aa11.44□□□□□ -0.58
TRPS1-204ENST00000422939 FAM181BA6NEQ2 426 aa11.43□□□□□ -0.58
TRPS1-204ENST00000422939 SFI1A8K8P3 1242 aa11.43□□□□□ -0.58
TRPS1-204ENST00000422939 PTK7Q13308 1070 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms