RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 STX6O43752 255 aa20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 PPFIA3O75145 1194 aa20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 ZFYVE27Q5T4F4 411 aa20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 SPINK5Q9NQ38 1064 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 EIF3JO75822 258 aaKnown RBP20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 SH2B1Q9NRF2 756 aaPredicted RBP20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 SMTNL1A8MU46 457 aa20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 RDXP35241 583 aaKnown RBP20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 ARHGAP29Q52LW3 1261 aa20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 DEF6Q9H4E7 631 aa20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 PTPRKQ15262 1439 aa20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 CAMSAP2Q08AD1 1489 aa20.57■□□□□ 0.88
TRAPPC10-203ENST00000422875 RLBP1P12271 317 aa20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 PPP4R3BQ5MIZ7 849 aa20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 CDK5RAP3Q96JB5 506 aa20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 NUCB1Q02818 461 aa20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 HDAC1Q13547 482 aaPredicted RBP20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 TTC22Q5TAA0 569 aa20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 GIMAP6Q6P9H5 292 aa20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 TMX3Q96JJ7 454 aa20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 ANO10Q9NW15 660 aa20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 PDIA4P13667 645 aaKnown RBP20.56■□□□□ 0.88
TRAPPC10-203ENST00000422875 CTNNA3Q9UI47 895 aa20.55■□□□□ 0.88
TRAPPC10-203ENST00000422875 CENPHQ9H3R5 247 aa20.55■□□□□ 0.88
TRAPPC10-203ENST00000422875 PODXL2Q9NZ53 605 aa20.55■□□□□ 0.88
TRAPPC10-203ENST00000422875 CABP4P57796 275 aa20.55■□□□□ 0.88
TRAPPC10-203ENST00000422875 HSP90AB2PQ58FF8 381 aa20.55■□□□□ 0.88
TRAPPC10-203ENST00000422875 CCDC181Q5TID7 509 aa20.55■□□□□ 0.88
TRAPPC10-203ENST00000422875 KIF6Q6ZMV9 814 aa20.55■□□□□ 0.88
TRAPPC10-203ENST00000422875 NACAP1Q9BZK3 213 aa20.55■□□□□ 0.88
TRAPPC10-203ENST00000422875 SDSP20132 328 aa20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 GJB2P29033 226 aa20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 MBIPQ9NS73 344 aa20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 IDH1O75874 414 aaKnown RBP20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 ZNF165P49910 485 aa20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 PIBF1Q8WXW3 757 aa20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 MCM5P33992 734 aa20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 UBE2Q2Q8WVN8 375 aa20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 CGNQ9P2M7 1197 aaKnown RBP20.54■□□□□ 0.88
TRAPPC10-203ENST00000422875 KLHL10Q6JEL2 608 aa20.53■□□□□ 0.88
TRAPPC10-203ENST00000422875 POLR3GO15318 223 aaPredicted RBP20.53■□□□□ 0.88
TRAPPC10-203ENST00000422875 EPB41L2O43491 1005 aaKnown RBP20.53■□□□□ 0.88
TRAPPC10-203ENST00000422875 BIN1O00499 593 aa20.53■□□□□ 0.88
TRAPPC10-203ENST00000422875 CDKL5O76039 1030 aa20.53■□□□□ 0.88
TRAPPC10-203ENST00000422875 LRSAM1Q6UWE0 723 aa20.53■□□□□ 0.88
TRAPPC10-203ENST00000422875 CCAR1Q8IX12 1150 aaKnown RBP20.53■□□□□ 0.88
TRAPPC10-203ENST00000422875 FLIIQ13045 1269 aa20.52■□□□□ 0.88
TRAPPC10-203ENST00000422875 DHX37Q8IY37 1157 aaKnown RBP20.52■□□□□ 0.88
TRAPPC10-203ENST00000422875 CCDC141Q6ZP82 1450 aa20.52■□□□□ 0.88
TRAPPC10-203ENST00000422875 KIF2AO00139 706 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC10-203ENST00000422875 IKQ13123 557 aaPredicted RBP20.52■□□□□ 0.88
TRAPPC10-203ENST00000422875 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
TRAPPC10-203ENST00000422875 STRN4Q9NRL3 753 aa20.52■□□□□ 0.88
TRAPPC10-203ENST00000422875 CCT2P78371 535 aaKnown RBP20.52■□□□□ 0.87
TRAPPC10-203ENST00000422875 STIM1Q13586 685 aa20.52■□□□□ 0.87
TRAPPC10-203ENST00000422875 ODF2Q5BJF6 829 aa20.52■□□□□ 0.87
TRAPPC10-203ENST00000422875 TANGO6Q9C0B7 1094 aa20.52■□□□□ 0.87
TRAPPC10-203ENST00000422875 CTDP1Q9Y5B0 961 aaPredicted RBP20.52■□□□□ 0.87
TRAPPC10-203ENST00000422875 DYNC1I1O14576 645 aa20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 CCDC191Q8NCU4 936 aa20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 ZHX3Q9H4I2 956 aa20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 PRIM1P49642 420 aaKnown RBP20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 CCDC82Q8N4S0 544 aa20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 KRT18P05783 430 aaKnown RBP20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 TDO2P48775 406 aa20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 TMX1Q9H3N1 280 aa20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 U3KPZ7 1027 aaPredicted RBP20.51■□□□□ 0.87
TRAPPC10-203ENST00000422875 MEIS3Q99687 375 aa20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 IMMTQ16891 758 aaKnown RBP20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 C16orf71Q8IYS4 520 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 TTC12Q9H892 705 aaPredicted RBP20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 FBXO3Q9UK99 471 aa20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 PLEKHH1Q9ULM0 1364 aa20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 PLB1Q6P1J6 1458 aa20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 KIAA0754O94854 1291 aa20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 UBE2HP62256 183 aa20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 C8orf76Q96K31 380 aa20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 UBAC1Q9BSL1 405 aa20.5■□□□□ 0.87
TRAPPC10-203ENST00000422875 FSIP1Q8NA03 581 aa20.49■□□□□ 0.87
TRAPPC10-203ENST00000422875 DDX19AQ9NUU7 478 aaKnown RBP20.49■□□□□ 0.87
TRAPPC10-203ENST00000422875 TCEANC2Q96MN5 208 aa20.49■□□□□ 0.87
TRAPPC10-203ENST00000422875 HSP90AB3PQ58FF7 597 aa20.49■□□□□ 0.87
TRAPPC10-203ENST00000422875 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
TRAPPC10-203ENST00000422875 NECAB1Q8N987 351 aa20.48■□□□□ 0.87
TRAPPC10-203ENST00000422875 DNAAF4Q8WXU2 420 aa20.48■□□□□ 0.87
TRAPPC10-203ENST00000422875 MPHOSPH8Q99549 860 aa20.48■□□□□ 0.87
TRAPPC10-203ENST00000422875 SNAPC4Q5SXM2 1469 aa20.48■□□□□ 0.87
TRAPPC10-203ENST00000422875 GOLGA6L10A6NI86 522 aa20.48■□□□□ 0.87
TRAPPC10-203ENST00000422875 NOL7Q9UMY1 257 aaKnown RBP20.48■□□□□ 0.87
TRAPPC10-203ENST00000422875 SLC3A2P08195 630 aaKnown RBP20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 EIF5P55010 431 aaKnown RBP20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 KIF4BQ2VIQ3 1234 aa20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 ZC3H6P61129 1189 aaKnown RBP20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 NOLC1Q14978 699 aaKnown RBP eCLIP20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 CPLX3Q8WVH0 158 aa20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 ECHDC1Q9NTX5 307 aa20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 CNPY2Q9Y2B0 182 aa20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 ISM2Q6H9L7 571 aa20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 DHX29Q7Z478 1369 aaKnown RBP20.47■□□□□ 0.87
TRAPPC10-203ENST00000422875 ZSCAN12O43309 604 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms