RNA–Protein interactions for RNA: ENST00000422266.1

MDC1-204, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-204ENST00000422266 RC3H1Q5TC82 1133 aaKnown RBP11.6□□□□□ -0.55
MDC1-204ENST00000422266 COL23A1Q86Y22 540 aaPredicted RBP11.6□□□□□ -0.55
MDC1-204ENST00000422266 GAS2L2Q8NHY3 880 aa11.6□□□□□ -0.55
MDC1-204ENST00000422266 U2SURPO15042 1029 aaKnown RBP11.59□□□□□ -0.55
MDC1-204ENST00000422266 HMOX1P09601 288 aa11.59□□□□□ -0.55
MDC1-204ENST00000422266 RBM42Q9BTD8 480 aaKnown RBP11.59□□□□□ -0.55
MDC1-204ENST00000422266 RTCBQ9Y3I0 505 aaKnown RBP11.59□□□□□ -0.55
MDC1-204ENST00000422266 C4BP0C0L5 1744 aa11.58□□□□□ -0.56
MDC1-204ENST00000422266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.58□□□□□ -0.56
MDC1-204ENST00000422266 GNPATO15228 680 aa11.58□□□□□ -0.56
MDC1-204ENST00000422266 NFATC2IPQ8NCF5 419 aa11.58□□□□□ -0.56
MDC1-204ENST00000422266 SLC52A2Q9HAB3 445 aa11.58□□□□□ -0.56
MDC1-204ENST00000422266 KDM6AO15550 1401 aaPredicted RBP11.58□□□□□ -0.56
MDC1-204ENST00000422266 ZNF831Q5JPB2 1677 aa11.57□□□□□ -0.56
MDC1-204ENST00000422266 NEFMP07197 916 aa11.57□□□□□ -0.56
MDC1-204ENST00000422266 CNGB1Q14028 1251 aaPredicted RBP11.57□□□□□ -0.56
MDC1-204ENST00000422266 TRAPPC3LQ5T215 181 aa11.57□□□□□ -0.56
MDC1-204ENST00000422266 LINC00116Q8NCU8 138 aa11.57□□□□□ -0.56
MDC1-204ENST00000422266 TAF1LQ8IZX4 1826 aa11.57□□□□□ -0.56
MDC1-204ENST00000422266 CNTNAP4Q9C0A0 1308 aa11.57□□□□□ -0.56
MDC1-204ENST00000422266 RNMTO43148 476 aaKnown RBP11.56□□□□□ -0.56
MDC1-204ENST00000422266 PHF14O94880 888 aa11.56□□□□□ -0.56
MDC1-204ENST00000422266 YY1P25490 414 aa11.56□□□□□ -0.56
MDC1-204ENST00000422266 PNNQ9H307 717 aaKnown RBP11.56□□□□□ -0.56
MDC1-204ENST00000422266 CD2APQ9Y5K6 639 aa11.56□□□□□ -0.56
MDC1-204ENST00000422266 COL24A1Q17RW2 1714 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 GNAT3A8MTJ3 354 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 PTCD1O75127 700 aaKnown RBP11.55□□□□□ -0.56
MDC1-204ENST00000422266 RPS6KA4O75676 772 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 FCHSD2O94868 740 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 PPP2R1AP30153 589 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 RFC4P35249 363 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 TEFQ10587 303 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 ITPK1Q13572 414 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 MTHFSDQ2M296 383 aaKnown RBP11.55□□□□□ -0.56
MDC1-204ENST00000422266 VSIG10Q8N0Z9 540 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 KLHL34Q8N239 644 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 NLGN1Q8N2Q7 840 aa11.55□□□□□ -0.56
MDC1-204ENST00000422266 TUBGCP6Q96RT7 1819 aa11.54□□□□□ -0.56
MDC1-204ENST00000422266 GPR162Q16538 588 aa11.54□□□□□ -0.56
MDC1-204ENST00000422266 TTC5Q8N0Z6 440 aa11.54□□□□□ -0.56
MDC1-204ENST00000422266 COL3A1P02461 1466 aaPredicted RBP11.54□□□□□ -0.56
MDC1-204ENST00000422266 GRIN3BO60391 1043 aa11.53□□□□□ -0.56
MDC1-204ENST00000422266 U2AF1L5P0DN76 240 aaPredicted RBP11.53□□□□□ -0.56
MDC1-204ENST00000422266 U2AF1Q01081 240 aaKnown RBP eCLIP11.53□□□□□ -0.56
MDC1-204ENST00000422266 RTF1Q92541 710 aaKnown RBP11.53□□□□□ -0.56
MDC1-204ENST00000422266 TEX13AQ9BXU3 409 aaPredicted RBP11.53□□□□□ -0.56
MDC1-204ENST00000422266 SCN11AQ9UI33 1791 aa11.53□□□□□ -0.56
MDC1-204ENST00000422266 UBR3Q6ZT12 1888 aa11.53□□□□□ -0.56
MDC1-204ENST00000422266 MRC1P22897 1456 aa11.52□□□□□ -0.56
MDC1-204ENST00000422266 RALBP1Q15311 655 aa11.52□□□□□ -0.57
MDC1-204ENST00000422266 MSL1Q68DK7 614 aa11.52□□□□□ -0.57
MDC1-204ENST00000422266 LGR6Q9HBX8 967 aa11.52□□□□□ -0.57
MDC1-204ENST00000422266 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
MDC1-204ENST00000422266 STARD3NLO95772 234 aa11.51□□□□□ -0.57
MDC1-204ENST00000422266 PRKAR2BP31323 418 aa11.51□□□□□ -0.57
MDC1-204ENST00000422266 CRKLP46109 303 aaKnown RBP11.51□□□□□ -0.57
MDC1-204ENST00000422266 SLC4A9Q96Q91 983 aa11.51□□□□□ -0.57
MDC1-204ENST00000422266 RSPH6AQ9H0K4 717 aa11.51□□□□□ -0.57
MDC1-204ENST00000422266 ZEB1P37275 1124 aaPredicted RBP11.5□□□□□ -0.57
MDC1-204ENST00000422266 NPM2Q86SE8 214 aaKnown RBP11.5□□□□□ -0.57
MDC1-204ENST00000422266 ARHGEF1Q92888 912 aaKnown RBP11.5□□□□□ -0.57
MDC1-204ENST00000422266 ZPR1O75312 459 aa11.49□□□□□ -0.57
MDC1-204ENST00000422266 ZNF790Q6PG37 636 aa11.49□□□□□ -0.57
MDC1-204ENST00000422266 CCDC87Q9NVE4 849 aa11.49□□□□□ -0.57
MDC1-204ENST00000422266 PARP3Q9Y6F1 533 aa11.49□□□□□ -0.57
MDC1-204ENST00000422266 CICQ96RK0 1608 aaPredicted RBP11.49□□□□□ -0.57
MDC1-204ENST00000422266 MMP10P09238 476 aa11.48□□□□□ -0.57
MDC1-204ENST00000422266 TGFB2P61812 414 aa11.48□□□□□ -0.57
MDC1-204ENST00000422266 AMIGO3Q86WK7 504 aa11.48□□□□□ -0.57
MDC1-204ENST00000422266 PELP1Q8IZL8 1130 aaKnown RBP11.48□□□□□ -0.57
MDC1-204ENST00000422266 FMNL2Q96PY5 1086 aa11.48□□□□□ -0.57
MDC1-204ENST00000422266 CEMIPQ8WUJ3 1361 aa11.48□□□□□ -0.57
MDC1-204ENST00000422266 ADAMTS7Q9UKP4 1686 aa11.48□□□□□ -0.57
MDC1-204ENST00000422266 COL5A3P25940 1745 aaPredicted RBP11.48□□□□□ -0.57
MDC1-204ENST00000422266 A0A087WZG4 1122 aa11.47□□□□□ -0.57
MDC1-204ENST00000422266 BTBD11A6QL63 1104 aa11.47□□□□□ -0.57
MDC1-204ENST00000422266 CYP19A1P11511 503 aaPredicted RBP11.47□□□□□ -0.57
MDC1-204ENST00000422266 GYS1P13807 737 aa11.47□□□□□ -0.57
MDC1-204ENST00000422266 SLC39A6Q13433 755 aa11.47□□□□□ -0.57
MDC1-204ENST00000422266 IL17REQ8NFR9 667 aa11.47□□□□□ -0.57
MDC1-204ENST00000422266 USP42Q9H9J4 1324 aaKnown RBP11.46□□□□□ -0.57
MDC1-204ENST00000422266 MAPK8IP3Q9UPT6 1336 aa11.46□□□□□ -0.57
MDC1-204ENST00000422266 INTS5Q6P9B9 1019 aaKnown RBP11.46□□□□□ -0.57
MDC1-204ENST00000422266 DNAJC10Q8IXB1 793 aa11.46□□□□□ -0.57
MDC1-204ENST00000422266 NLGN2Q8NFZ4 835 aa11.46□□□□□ -0.57
MDC1-204ENST00000422266 PNISRQ8TF01 805 aaKnown RBP11.46□□□□□ -0.57
MDC1-204ENST00000422266 CHD4Q14839 1912 aa11.45□□□□□ -0.58
MDC1-204ENST00000422266 HEG1Q9ULI3 1381 aa11.45□□□□□ -0.58
MDC1-204ENST00000422266 PHACTR3Q96KR7 559 aa11.45□□□□□ -0.58
MDC1-204ENST00000422266 SOS1Q07889 1333 aaPredicted RBP11.44□□□□□ -0.58
MDC1-204ENST00000422266 DDX10Q13206 875 aaKnown RBP11.44□□□□□ -0.58
MDC1-204ENST00000422266 SMIM5Q71RC9 77 aa11.44□□□□□ -0.58
MDC1-204ENST00000422266 NARFQ9UHQ1 456 aa11.44□□□□□ -0.58
MDC1-204ENST00000422266 KCPQ6ZWJ8 1503 aa11.44□□□□□ -0.58
MDC1-204ENST00000422266 COL15A1P39059 1388 aa11.43□□□□□ -0.58
MDC1-204ENST00000422266 UTRNP46939 3433 aa11.43□□□□□ -0.58
MDC1-204ENST00000422266 MYBBP1AQ9BQG0 1328 aaKnown RBP11.43□□□□□ -0.58
MDC1-204ENST00000422266 SNRPA1P09661 255 aaKnown RBP11.43□□□□□ -0.58
MDC1-204ENST00000422266 TAF7Q15545 349 aaPredicted RBP11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms