RNA–Protein interactions for RNA: ENST00000421258.1

TFRC-204, Transcript of transferrin receptor, humanhuman

TSL 3

Gene TFRC, Length 524 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFRC-204ENST00000421258 BRCA1P38398 1863 aaKnown RBP18.12■□□□□ 0.49
TFRC-204ENST00000421258 FCHSD2O94868 740 aa18.11■□□□□ 0.49
TFRC-204ENST00000421258 ATP6V1AP38606 617 aa18.11■□□□□ 0.49
TFRC-204ENST00000421258 C9orf131Q5VYM1 1079 aa18.11■□□□□ 0.49
TFRC-204ENST00000421258 RBM46Q8TBY0 533 aaKnown RBP18.11■□□□□ 0.49
TFRC-204ENST00000421258 EMILIN1Q9Y6C2 1016 aa18.11■□□□□ 0.49
TFRC-204ENST00000421258 KIF20BQ96Q89 1820 aa18.1■□□□□ 0.49
TFRC-204ENST00000421258 C4AP0C0L4 1744 aa18.1■□□□□ 0.49
TFRC-204ENST00000421258 NKX1-1Q15270 411 aaPredicted RBP18.1■□□□□ 0.49
TFRC-204ENST00000421258 JMYQ8N9B5 988 aa18.1■□□□□ 0.49
TFRC-204ENST00000421258 TMOD3Q9NYL9 352 aa18.1■□□□□ 0.49
TFRC-204ENST00000421258 NCAPD2Q15021 1401 aa18.09■□□□□ 0.49
TFRC-204ENST00000421258 TGFB2P61812 414 aa18.09■□□□□ 0.49
TFRC-204ENST00000421258 TNS4Q8IZW8 715 aa18.09■□□□□ 0.49
TFRC-204ENST00000421258 KDRP35968 1356 aa18.08■□□□□ 0.49
TFRC-204ENST00000421258 SLC4A9Q96Q91 983 aa18.08■□□□□ 0.48
TFRC-204ENST00000421258 ATG3Q9NT62 314 aa18.08■□□□□ 0.48
TFRC-204ENST00000421258 KCNA3P22001 575 aa18.07■□□□□ 0.48
TFRC-204ENST00000421258 HMGB2P26583 209 aaKnown RBP18.07■□□□□ 0.48
TFRC-204ENST00000421258 TMF1P82094 1093 aa18.06■□□□□ 0.48
TFRC-204ENST00000421258 C16orf71Q8IYS4 520 aaPredicted RBP18.06■□□□□ 0.48
TFRC-204ENST00000421258 GYS1P13807 737 aa18.05■□□□□ 0.48
TFRC-204ENST00000421258 ARHGEF1Q92888 912 aaKnown RBP18.05■□□□□ 0.48
TFRC-204ENST00000421258 ARFGEF1Q9Y6D6 1849 aa18.05■□□□□ 0.48
TFRC-204ENST00000421258 COL5A3P25940 1745 aaPredicted RBP18.04■□□□□ 0.48
TFRC-204ENST00000421258 PPM1GO15355 546 aaPredicted RBP18.04■□□□□ 0.48
TFRC-204ENST00000421258 PHKG2P15735 406 aa18.04■□□□□ 0.48
TFRC-204ENST00000421258 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
TFRC-204ENST00000421258 RRAGCQ9HB90 399 aa18.04■□□□□ 0.48
TFRC-204ENST00000421258 CCDC87Q9NVE4 849 aa18.04■□□□□ 0.48
TFRC-204ENST00000421258 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
TFRC-204ENST00000421258 SPG7Q9UQ90 795 aa18.04■□□□□ 0.48
TFRC-204ENST00000421258 RTCBQ9Y3I0 505 aaKnown RBP18.04■□□□□ 0.48
TFRC-204ENST00000421258 PLEKHG2Q9H7P9 1386 aa18.04■□□□□ 0.48
TFRC-204ENST00000421258 PRELPP51888 382 aa18.03■□□□□ 0.48
TFRC-204ENST00000421258 FSTL1Q12841 308 aa18.03■□□□□ 0.48
TFRC-204ENST00000421258 NLGN1Q8N2Q7 840 aa18.03■□□□□ 0.48
TFRC-204ENST00000421258 KIF24Q5T7B8 1368 aa18.03■□□□□ 0.48
TFRC-204ENST00000421258 EYA1Q99502 592 aa18.02■□□□□ 0.48
TFRC-204ENST00000421258 RBM42Q9BTD8 480 aaKnown RBP18.02■□□□□ 0.48
TFRC-204ENST00000421258 ANKRD26Q9UPS8 1709 aa18.02■□□□□ 0.48
TFRC-204ENST00000421258 CHRNA5P30532 468 aa18.01■□□□□ 0.47
TFRC-204ENST00000421258 DCAF5Q96JK2 942 aa18.01■□□□□ 0.47
TFRC-204ENST00000421258 SRP68Q9UHB9 627 aaKnown RBP18.01■□□□□ 0.47
TFRC-204ENST00000421258 TNRC6CQ9HCJ0 1690 aaKnown RBP18.01■□□□□ 0.47
TFRC-204ENST00000421258 TONSLQ96HA7 1378 aa18.01■□□□□ 0.47
TFRC-204ENST00000421258 MYH14Q7Z406 1995 aaKnown RBP18■□□□□ 0.47
TFRC-204ENST00000421258 DDR1Q08345 913 aa18■□□□□ 0.47
TFRC-204ENST00000421258 CARD14Q9BXL6 1004 aa18■□□□□ 0.47
TFRC-204ENST00000421258 PARP3Q9Y6F1 533 aa18■□□□□ 0.47
TFRC-204ENST00000421258 KDM2BQ8NHM5 1336 aa17.99■□□□□ 0.47
TFRC-204ENST00000421258 RFC4P35249 363 aa17.99■□□□□ 0.47
TFRC-204ENST00000421258 RASSF7Q02833 373 aa17.99■□□□□ 0.47
TFRC-204ENST00000421258 IFNL2Q8IZJ0 200 aa17.99■□□□□ 0.47
TFRC-204ENST00000421258 HSPA1AP0DMV8 641 aaKnown RBP17.98■□□□□ 0.47
TFRC-204ENST00000421258 HSPA1BP0DMV9 641 aaKnown RBP17.98■□□□□ 0.47
TFRC-204ENST00000421258 DALRD3Q5D0E6 543 aaKnown RBP17.98■□□□□ 0.47
TFRC-204ENST00000421258 PIM2Q9P1W9 311 aa17.98■□□□□ 0.47
TFRC-204ENST00000421258 CNTNAP4Q9C0A0 1308 aa17.98■□□□□ 0.47
TFRC-204ENST00000421258 SBF1O95248 1867 aa17.97■□□□□ 0.47
TFRC-204ENST00000421258 FKBP8Q14318 412 aa17.97■□□□□ 0.47
TFRC-204ENST00000421258 ZNF831Q5JPB2 1677 aa17.96■□□□□ 0.47
TFRC-204ENST00000421258 RPS6KA4O75676 772 aa17.96■□□□□ 0.47
TFRC-204ENST00000421258 ADRA2BP18089 450 aa17.96■□□□□ 0.47
TFRC-204ENST00000421258 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.96■□□□□ 0.471e-27■□□□□ 10.9
TFRC-204ENST00000421258 KDM6AO15550 1401 aaPredicted RBP17.96■□□□□ 0.47
TFRC-204ENST00000421258 RC3H1Q5TC82 1133 aaKnown RBP17.95■□□□□ 0.46
TFRC-204ENST00000421258 SMC1BQ8NDV3 1235 aa17.95■□□□□ 0.46
TFRC-204ENST00000421258 WASHC2AQ641Q2 1341 aa17.95■□□□□ 0.46
TFRC-204ENST00000421258 PTCD1O75127 700 aaKnown RBP17.93■□□□□ 0.46
TFRC-204ENST00000421258 USP42Q9H9J4 1324 aaKnown RBP17.93■□□□□ 0.46
TFRC-204ENST00000421258 TJP1Q07157 1748 aa17.92■□□□□ 0.46
TFRC-204ENST00000421258 EIF4A2Q14240 407 aaKnown RBP17.92■□□□□ 0.46
TFRC-204ENST00000421258 ADAMTS7Q9UKP4 1686 aa17.91■□□□□ 0.46
TFRC-204ENST00000421258 CRKLP46109 303 aaKnown RBP17.91■□□□□ 0.46
TFRC-204ENST00000421258 POLKQ9UBT6 870 aa17.91■□□□□ 0.46
TFRC-204ENST00000421258 TIAM2Q8IVF5 1701 aa17.9■□□□□ 0.46
TFRC-204ENST00000421258 POLRMTO00411 1230 aaKnown RBP17.9■□□□□ 0.46
TFRC-204ENST00000421258 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
TFRC-204ENST00000421258 TNNT2P45379 298 aaPredicted RBP17.89■□□□□ 0.45
TFRC-204ENST00000421258 CABP4P57796 275 aa17.87■□□□□ 0.45
TFRC-204ENST00000421258 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
TFRC-204ENST00000421258 INTS5Q6P9B9 1019 aaKnown RBP17.86■□□□□ 0.45
TFRC-204ENST00000421258 GLTPD2A6NH11 291 aa17.85■□□□□ 0.45
TFRC-204ENST00000421258 POTECB2RU33 542 aa17.85■□□□□ 0.45
TFRC-204ENST00000421258 SLC24A1O60721 1099 aa17.85■□□□□ 0.45
TFRC-204ENST00000421258 VEGFAP15692 232 aaPredicted RBP17.85■□□□□ 0.45
TFRC-204ENST00000421258 LMNB1P20700 586 aa17.85■□□□□ 0.45
TFRC-204ENST00000421258 TM4SF1P30408 202 aa17.85■□□□□ 0.45
TFRC-204ENST00000421258 AFDNP55196 1824 aaKnown RBP17.85■□□□□ 0.45
TFRC-204ENST00000421258 USPL1Q5W0Q7 1092 aa17.85■□□□□ 0.45
TFRC-204ENST00000421258 CARMIL3Q8ND23 1372 aa17.85■□□□□ 0.45
TFRC-204ENST00000421258 NFKBIEO00221 500 aa17.84■□□□□ 0.45
TFRC-204ENST00000421258 AEBP1Q8IUX7 1158 aa17.84■□□□□ 0.45
TFRC-204ENST00000421258 DLEC1Q9Y238 1755 aa17.84■□□□□ 0.45
TFRC-204ENST00000421258 ZC3H4Q9UPT8 1303 aaKnown RBP17.83■□□□□ 0.44
TFRC-204ENST00000421258 NFATC2IPQ8NCF5 419 aa17.83■□□□□ 0.44
TFRC-204ENST00000421258 MKRN1Q9UHC7 482 aaKnown RBP17.83■□□□□ 0.44
TFRC-204ENST00000421258 CCDC88AQ3V6T2 1871 aa17.82■□□□□ 0.44
TFRC-204ENST00000421258 NFIXQ14938 502 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms