RNA–Protein interactions for RNA: ENST00000420746.1

TRIM39-206, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 708 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-206ENST00000420746 DALRD3Q5D0E6 543 aaKnown RBP13□□□□□ -0.33
TRIM39-206ENST00000420746 MPRIPQ6WCQ1 1025 aa13□□□□□ -0.33
TRIM39-206ENST00000420746 C4AP0C0L4 1744 aa12.99□□□□□ -0.33
TRIM39-206ENST00000420746 LOC102724428A0A0B4J2F2 783 aa12.99□□□□□ -0.33
TRIM39-206ENST00000420746 HOXC9P31274 260 aa12.99□□□□□ -0.33
TRIM39-206ENST00000420746 SIK1P57059 783 aa12.99□□□□□ -0.33
TRIM39-206ENST00000420746 MKRN1Q9UHC7 482 aaKnown RBP12.99□□□□□ -0.33
TRIM39-206ENST00000420746 MAP2P11137 1827 aaKnown RBP12.99□□□□□ -0.33
TRIM39-206ENST00000420746 RAB3GAP2Q9H2M9 1393 aa12.98□□□□□ -0.33
TRIM39-206ENST00000420746 ADRA2BP18089 450 aa12.98□□□□□ -0.33
TRIM39-206ENST00000420746 RAPGEF4Q8WZA2 1011 aa12.98□□□□□ -0.33
TRIM39-206ENST00000420746 RTL1A6NKG5 1358 aa12.97□□□□□ -0.33
TRIM39-206ENST00000420746 WBP1LQ9NX94 342 aa12.97□□□□□ -0.33
TRIM39-206ENST00000420746 PARP3Q9Y6F1 533 aa12.97□□□□□ -0.33
TRIM39-206ENST00000420746 MAP3K19Q56UN5 1328 aa12.96□□□□□ -0.33
TRIM39-206ENST00000420746 SBF1O95248 1867 aa12.96□□□□□ -0.33
TRIM39-206ENST00000420746 LMNB1P20700 586 aa12.96□□□□□ -0.33
TRIM39-206ENST00000420746 LBX1P52954 281 aa12.96□□□□□ -0.33
TRIM39-206ENST00000420746 TRAPPC3LQ5T215 181 aa12.96□□□□□ -0.33
TRIM39-206ENST00000420746 TATP17735 454 aaPredicted RBP12.95□□□□□ -0.34
TRIM39-206ENST00000420746 NBPF6Q5VWK0 638 aa12.95□□□□□ -0.34
TRIM39-206ENST00000420746 HDGFL2Q7Z4V5 671 aaPredicted RBP12.95□□□□□ -0.34
TRIM39-206ENST00000420746 PIGBQ92521 554 aa12.95□□□□□ -0.34
TRIM39-206ENST00000420746 NBPF4Q96M43 638 aa12.95□□□□□ -0.34
TRIM39-206ENST00000420746 RTCBQ9Y3I0 505 aaKnown RBP12.95□□□□□ -0.34
TRIM39-206ENST00000420746 CYP27B1O15528 508 aa12.94□□□□□ -0.34
TRIM39-206ENST00000420746 GYS1P13807 737 aa12.94□□□□□ -0.34
TRIM39-206ENST00000420746 AMPHP49418 695 aa12.94□□□□□ -0.34
TRIM39-206ENST00000420746 ITPK1Q13572 414 aa12.94□□□□□ -0.34
TRIM39-206ENST00000420746 CHADLQ6NUI6 762 aa12.94□□□□□ -0.34
TRIM39-206ENST00000420746 POTECB2RU33 542 aa12.93□□□□□ -0.34
TRIM39-206ENST00000420746 HSPA8P11142 646 aaKnown RBP12.93□□□□□ -0.34
TRIM39-206ENST00000420746 NKX1-1Q15270 411 aaPredicted RBP12.93□□□□□ -0.34
TRIM39-206ENST00000420746 SMG6Q86US8 1419 aaKnown RBP12.93□□□□□ -0.34
TRIM39-206ENST00000420746 ITGB4P16144 1822 aa12.92□□□□□ -0.34
TRIM39-206ENST00000420746 ATP6V1AP38606 617 aa12.92□□□□□ -0.34
TRIM39-206ENST00000420746 RGPD2P0DJD1 1756 aa12.92□□□□□ -0.34
TRIM39-206ENST00000420746 CCDC85CA6NKD9 419 aa12.91□□□□□ -0.34
TRIM39-206ENST00000420746 VEGFBP49765 207 aa12.91□□□□□ -0.34
TRIM39-206ENST00000420746 RASSF7Q02833 373 aa12.91□□□□□ -0.34
TRIM39-206ENST00000420746 RC3H1Q5TC82 1133 aaKnown RBP12.91□□□□□ -0.34
TRIM39-206ENST00000420746 DPY19L2Q6NUT2 758 aa12.91□□□□□ -0.34
TRIM39-206ENST00000420746 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
TRIM39-206ENST00000420746 PASKQ96RG2 1323 aa12.9□□□□□ -0.34
TRIM39-206ENST00000420746 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
TRIM39-206ENST00000420746 KDRP35968 1356 aa12.9□□□□□ -0.34
TRIM39-206ENST00000420746 TNRC18O15417 2968 aaPredicted RBP12.9□□□□□ -0.35
TRIM39-206ENST00000420746 ZNF831Q5JPB2 1677 aa12.89□□□□□ -0.35
TRIM39-206ENST00000420746 CNTNAP4Q9C0A0 1308 aa12.89□□□□□ -0.35
TRIM39-206ENST00000420746 TIAM2Q8IVF5 1701 aa12.89□□□□□ -0.35
TRIM39-206ENST00000420746 RFC4P35249 363 aa12.89□□□□□ -0.35
TRIM39-206ENST00000420746 MAP2K1Q02750 393 aaPredicted RBP12.89□□□□□ -0.35
TRIM39-206ENST00000420746 USHBP1Q8N6Y0 703 aa12.89□□□□□ -0.35
TRIM39-206ENST00000420746 COG3Q96JB2 828 aa12.89□□□□□ -0.35
TRIM39-206ENST00000420746 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
TRIM39-206ENST00000420746 A0A1W2PP64 1363 aa12.89□□□□□ -0.35
TRIM39-206ENST00000420746 VIRMAQ69YN4 1812 aaKnown RBP12.88□□□□□ -0.35
TRIM39-206ENST00000420746 RPS6KA4O75676 772 aa12.88□□□□□ -0.35
TRIM39-206ENST00000420746 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
TRIM39-206ENST00000420746 TMEM88BA6NKF7 163 aa12.87□□□□□ -0.35
TRIM39-206ENST00000420746 CHRNA5P30532 468 aa12.87□□□□□ -0.35
TRIM39-206ENST00000420746 RASSF10A6NK89 507 aa12.86□□□□□ -0.35
TRIM39-206ENST00000420746 TMC1Q8TDI8 760 aa12.86□□□□□ -0.35
TRIM39-206ENST00000420746 SLC12A5Q9H2X9 1139 aa12.86□□□□□ -0.35
TRIM39-206ENST00000420746 INSRP06213 1382 aa12.85□□□□□ -0.35
TRIM39-206ENST00000420746 KIF24Q5T7B8 1368 aa12.85□□□□□ -0.35
TRIM39-206ENST00000420746 DDR1Q08345 913 aa12.85□□□□□ -0.35
TRIM39-206ENST00000420746 LDHDQ86WU2 507 aa12.85□□□□□ -0.35
TRIM39-206ENST00000420746 PUS7Q96PZ0 661 aaKnown RBP12.85□□□□□ -0.35
TRIM39-206ENST00000420746 ATG3Q9NT62 314 aa12.85□□□□□ -0.35
TRIM39-206ENST00000420746 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRIM39-206ENST00000420746 SPG7Q9UQ90 795 aa12.84□□□□□ -0.35
TRIM39-206ENST00000420746 NCAPD2Q15021 1401 aa12.84□□□□□ -0.35
TRIM39-206ENST00000420746 USP42Q9H9J4 1324 aaKnown RBP12.84□□□□□ -0.35
TRIM39-206ENST00000420746 ROCK2O75116 1388 aaKnown RBP12.83□□□□□ -0.36
TRIM39-206ENST00000420746 COL5A3P25940 1745 aaPredicted RBP12.83□□□□□ -0.36
TRIM39-206ENST00000420746 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.36
TRIM39-206ENST00000420746 NFKBIEO00221 500 aa12.83□□□□□ -0.36
TRIM39-206ENST00000420746 POLRMTO00411 1230 aaKnown RBP12.83□□□□□ -0.36
TRIM39-206ENST00000420746 THSD7BQ9C0I4 1608 aa12.82□□□□□ -0.36
TRIM39-206ENST00000420746 POTEIP0CG38 1075 aa12.82□□□□□ -0.36
TRIM39-206ENST00000420746 POTEJP0CG39 1038 aa12.82□□□□□ -0.36
TRIM39-206ENST00000420746 FKBP8Q14318 412 aa12.82□□□□□ -0.36
TRIM39-206ENST00000420746 DEFB115Q30KQ5 88 aa12.82□□□□□ -0.36
TRIM39-206ENST00000420746 TTLL6Q8N841 843 aa12.82□□□□□ -0.36
TRIM39-206ENST00000420746 SLC4A9Q96Q91 983 aa12.82□□□□□ -0.36
TRIM39-206ENST00000420746 WDR33Q9C0J8 1336 aaKnown RBP12.82□□□□□ -0.36
TRIM39-206ENST00000420746 FLT4P35916 1363 aa12.81□□□□□ -0.36
TRIM39-206ENST00000420746 PDE4DIPQ5VU43 2346 aa12.81□□□□□ -0.36
TRIM39-206ENST00000420746 ITGBL1O95965 494 aaPredicted RBP12.81□□□□□ -0.36
TRIM39-206ENST00000420746 FBLN1P23142 703 aa12.81□□□□□ -0.36
TRIM39-206ENST00000420746 TM4SF1P30408 202 aa12.81□□□□□ -0.36
TRIM39-206ENST00000420746 RRS1Q15050 365 aaKnown RBP12.81□□□□□ -0.36
TRIM39-206ENST00000420746 DLEC1Q9Y238 1755 aa12.8□□□□□ -0.36
TRIM39-206ENST00000420746 ERFEQ4G0M1 354 aa12.8□□□□□ -0.36
TRIM39-206ENST00000420746 L3MBTL3Q96JM7 780 aaPredicted RBP12.8□□□□□ -0.36
TRIM39-206ENST00000420746 BEGAINQ9BUH8 593 aa12.8□□□□□ -0.36
TRIM39-206ENST00000420746 TONSLQ96HA7 1378 aa12.8□□□□□ -0.36
TRIM39-206ENST00000420746 HSP90AB2PQ58FF8 381 aa12.79□□□□□ -0.36
TRIM39-206ENST00000420746 PRPF38BQ5VTL8 546 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms