RNA–Protein interactions for RNA: ENST00000420591.1

SNED1-206, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 3

Gene SNED1, Length 664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-206ENST00000420591 C4BP0C0L5 1744 aa26.91■■□□□ 1.9
SNED1-206ENST00000420591 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.91■■□□□ 1.9
SNED1-206ENST00000420591 PER1O15534 1290 aaPredicted RBP26.91■■□□□ 1.9
SNED1-206ENST00000420591 SSFA2P28290 1259 aa26.91■■□□□ 1.9
SNED1-206ENST00000420591 RBM42Q9BTD8 480 aaKnown RBP26.91■■□□□ 1.9
SNED1-206ENST00000420591 TAF1LQ8IZX4 1826 aa26.89■■□□□ 1.9
SNED1-206ENST00000420591 GNPATO15228 680 aa26.89■■□□□ 1.9
SNED1-206ENST00000420591 ITPK1Q13572 414 aa26.89■■□□□ 1.9
SNED1-206ENST00000420591 CNGB1Q14028 1251 aaPredicted RBP26.89■■□□□ 1.9
SNED1-206ENST00000420591 KDRP35968 1356 aa26.88■■□□□ 1.89
SNED1-206ENST00000420591 NLGN2Q8NFZ4 835 aa26.87■■□□□ 1.89
SNED1-206ENST00000420591 COL24A1Q17RW2 1714 aa26.87■■□□□ 1.89
SNED1-206ENST00000420591 DIAPH1O60610 1272 aaKnown RBP26.86■■□□□ 1.89
SNED1-206ENST00000420591 KDM6AO15550 1401 aaPredicted RBP26.85■■□□□ 1.89
SNED1-206ENST00000420591 SMIM5Q71RC9 77 aa26.85■■□□□ 1.89
SNED1-206ENST00000420591 AMIGO3Q86WK7 504 aa26.85■■□□□ 1.89
SNED1-206ENST00000420591 HMOX1P09601 288 aa26.84■■□□□ 1.89
SNED1-206ENST00000420591 RTCBQ9Y3I0 505 aaKnown RBP26.84■■□□□ 1.89
SNED1-206ENST00000420591 AKAP4Q5JQC9 854 aa26.83■■□□□ 1.89
SNED1-206ENST00000420591 NFATC2IPQ8NCF5 419 aa26.83■■□□□ 1.89
SNED1-206ENST00000420591 CD2APQ9Y5K6 639 aa26.83■■□□□ 1.89
SNED1-206ENST00000420591 NPC1L1Q9UHC9 1359 aa26.82■■□□□ 1.88
SNED1-206ENST00000420591 PTCD1O75127 700 aaKnown RBP26.81■■□□□ 1.88
SNED1-206ENST00000420591 TRAPPC3LQ5T215 181 aa26.81■■□□□ 1.88
SNED1-206ENST00000420591 GRIN3BO60391 1043 aa26.79■■□□□ 1.88
SNED1-206ENST00000420591 RC3H1Q5TC82 1133 aaKnown RBP26.79■■□□□ 1.88
SNED1-206ENST00000420591 SLC4A9Q96Q91 983 aa26.79■■□□□ 1.88
SNED1-206ENST00000420591 UBR3Q6ZT12 1888 aa26.78■■□□□ 1.88
SNED1-206ENST00000420591 CNTNAP4Q9C0A0 1308 aa26.76■■□□□ 1.87
SNED1-206ENST00000420591 U2SURPO15042 1029 aaKnown RBP26.76■■□□□ 1.87
SNED1-206ENST00000420591 ADRA2BP18089 450 aa26.76■■□□□ 1.87
SNED1-206ENST00000420591 ZNF784Q8NCA9 323 aaPredicted RBP26.76■■□□□ 1.87
SNED1-206ENST00000420591 SLC52A2Q9HAB3 445 aa26.75■■□□□ 1.87
SNED1-206ENST00000420591 RPS6KA4O75676 772 aa26.74■■□□□ 1.87
SNED1-206ENST00000420591 RFC4P35249 363 aa26.74■■□□□ 1.87
SNED1-206ENST00000420591 RNMTO43148 476 aaKnown RBP26.73■■□□□ 1.87
SNED1-206ENST00000420591 NLGN1Q8N2Q7 840 aa26.73■■□□□ 1.87
SNED1-206ENST00000420591 CFAP53Q96M91 514 aa26.73■■□□□ 1.87
SNED1-206ENST00000420591 LGR6Q9HBX8 967 aa26.73■■□□□ 1.87
SNED1-206ENST00000420591 MMP10P09238 476 aa26.72■■□□□ 1.87
SNED1-206ENST00000420591 MTHFSDQ2M296 383 aaKnown RBP26.72■■□□□ 1.87
SNED1-206ENST00000420591 ARHGEF1Q92888 912 aaKnown RBP26.72■■□□□ 1.87
SNED1-206ENST00000420591 YBX3P16989 372 aaKnown RBP eCLIP26.71■■□□□ 1.87
SNED1-206ENST00000420591 CHD4Q14839 1912 aa26.71■■□□□ 1.87
SNED1-206ENST00000420591 ZNF831Q5JPB2 1677 aa26.7■■□□□ 1.87
SNED1-206ENST00000420591 CRKLP46109 303 aaKnown RBP26.7■■□□□ 1.86
SNED1-206ENST00000420591 UTRNP46939 3433 aa26.67■■□□□ 1.86
SNED1-206ENST00000420591 GAS2L2Q8NHY3 880 aa26.66■■□□□ 1.86
SNED1-206ENST00000420591 NUDCQ9Y266 331 aa26.66■■□□□ 1.86
SNED1-206ENST00000420591 SLC39A6Q13433 755 aa26.65■■□□□ 1.86
SNED1-206ENST00000420591 PARP3Q9Y6F1 533 aa26.65■■□□□ 1.86
SNED1-206ENST00000420591 SCN11AQ9UI33 1791 aa26.65■■□□□ 1.86
SNED1-206ENST00000420591 COL3A1P02461 1466 aaPredicted RBP26.64■■□□□ 1.86
SNED1-206ENST00000420591 GYS1P13807 737 aa26.64■■□□□ 1.86
SNED1-206ENST00000420591 DNAJC10Q8IXB1 793 aa26.63■■□□□ 1.85
SNED1-206ENST00000420591 CCDC87Q9NVE4 849 aa26.63■■□□□ 1.85
SNED1-206ENST00000420591 WWC3Q9ULE0 1092 aa26.63■■□□□ 1.85
SNED1-206ENST00000420591 COL5A3P25940 1745 aaPredicted RBP26.62■■□□□ 1.85
SNED1-206ENST00000420591 GNAT3A8MTJ3 354 aa26.62■■□□□ 1.85
SNED1-206ENST00000420591 TEFQ10587 303 aa26.62■■□□□ 1.85
SNED1-206ENST00000420591 TTC5Q8N0Z6 440 aa26.62■■□□□ 1.85
SNED1-206ENST00000420591 MRC1P22897 1456 aa26.61■■□□□ 1.85
SNED1-206ENST00000420591 TGFB2P61812 414 aa26.59■■□□□ 1.85
SNED1-206ENST00000420591 INTS5Q6P9B9 1019 aaKnown RBP26.59■■□□□ 1.85
SNED1-206ENST00000420591 ZPR1O75312 459 aa26.58■■□□□ 1.85
SNED1-206ENST00000420591 PPP2R1AP30153 589 aa26.58■■□□□ 1.85
SNED1-206ENST00000420591 PRKAR2BP31323 418 aa26.58■■□□□ 1.85
SNED1-206ENST00000420591 SRP68Q9UHB9 627 aaKnown RBP26.58■■□□□ 1.85
SNED1-206ENST00000420591 USP42Q9H9J4 1324 aaKnown RBP26.58■■□□□ 1.85
SNED1-206ENST00000420591 U2AF1L5P0DN76 240 aaPredicted RBP26.57■■□□□ 1.84
SNED1-206ENST00000420591 CYP19A1P11511 503 aaPredicted RBP26.57■■□□□ 1.84
SNED1-206ENST00000420591 U2AF1Q01081 240 aaKnown RBP eCLIP26.57■■□□□ 1.84
SNED1-206ENST00000420591 VSIG10Q8N0Z9 540 aa26.57■■□□□ 1.84
SNED1-206ENST00000420591 CICQ96RK0 1608 aaPredicted RBP26.56■■□□□ 1.84
SNED1-206ENST00000420591 MYH14Q7Z406 1995 aaKnown RBP26.56■■□□□ 1.84
SNED1-206ENST00000420591 ZEB1P37275 1124 aaPredicted RBP26.55■■□□□ 1.84
SNED1-206ENST00000420591 IL17REQ8NFR9 667 aa26.55■■□□□ 1.84
SNED1-206ENST00000420591 GOLGB1Q14789 3259 aaKnown RBP26.54■■□□□ 1.84
SNED1-206ENST00000420591 TJP1Q07157 1748 aa26.54■■□□□ 1.84
SNED1-206ENST00000420591 STARD3NLO95772 234 aa26.54■■□□□ 1.84
SNED1-206ENST00000420591 FKBP8Q14318 412 aa26.54■■□□□ 1.84
SNED1-206ENST00000420591 RSPH6AQ9H0K4 717 aa26.54■■□□□ 1.84
SNED1-206ENST00000420591 SOS1Q07889 1333 aaPredicted RBP26.53■■□□□ 1.84
SNED1-206ENST00000420591 A0A0G2JLW4 131 aa26.52■■□□□ 1.84
SNED1-206ENST00000420591 GIGYF1O75420 1035 aaPredicted RBP26.52■■□□□ 1.84
SNED1-206ENST00000420591 C10orf71Q711Q0 1435 aa26.52■■□□□ 1.84
SNED1-206ENST00000420591 PHACTR3Q96KR7 559 aa26.52■■□□□ 1.84
SNED1-206ENST00000420591 KCPQ6ZWJ8 1503 aa26.51■■□□□ 1.83
SNED1-206ENST00000420591 PXDNLA1KZ92 1463 aa26.51■■□□□ 1.83
SNED1-206ENST00000420591 USPL1Q5W0Q7 1092 aa26.51■■□□□ 1.83
SNED1-206ENST00000420591 ZNF790Q6PG37 636 aa26.51■■□□□ 1.83
SNED1-206ENST00000420591 RTF1Q92541 710 aaKnown RBP26.51■■□□□ 1.83
SNED1-206ENST00000420591 BCS1LQ9Y276 419 aa26.51■■□□□ 1.83
SNED1-206ENST00000420591 ZBTB1Q9Y2K1 713 aa26.51■■□□□ 1.83
SNED1-206ENST00000420591 ADAMTS7Q9UKP4 1686 aa26.5■■□□□ 1.83
SNED1-206ENST00000420591 FCHSD2O94868 740 aa26.5■■□□□ 1.83
SNED1-206ENST00000420591 TEX13AQ9BXU3 409 aaPredicted RBP26.5■■□□□ 1.83
SNED1-206ENST00000420591 C4AP0C0L4 1744 aa26.49■■□□□ 1.83
SNED1-206ENST00000420591 DPEP1P16444 411 aa26.49■■□□□ 1.83
SNED1-206ENST00000420591 CANXP27824 592 aaKnown RBP26.49■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms