RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 SMC5Q8IY18 1101 aa17.6■□□□□ 0.41
AP000550.1-201ENST00000420508 EXOC6BQ9Y2D4 811 aa17.6■□□□□ 0.41
AP000550.1-201ENST00000420508 TBX22Q9Y458 520 aa17.6■□□□□ 0.41
AP000550.1-201ENST00000420508 ZFYVE16Q7Z3T8 1539 aa17.6■□□□□ 0.41
AP000550.1-201ENST00000420508 KIF24Q5T7B8 1368 aa17.6■□□□□ 0.41
AP000550.1-201ENST00000420508 CLASP1Q7Z460 1538 aa17.6■□□□□ 0.41
AP000550.1-201ENST00000420508 KIF1BO60333 1816 aa17.6■□□□□ 0.41
AP000550.1-201ENST00000420508 ANAPC15P60006 121 aa17.59■□□□□ 0.41
AP000550.1-201ENST00000420508 CHD1O14646 1710 aa17.59■□□□□ 0.41
AP000550.1-201ENST00000420508 HSP90AB3PQ58FF7 597 aa17.59■□□□□ 0.41
AP000550.1-201ENST00000420508 GOLGA6L1Q8N7Z2 621 aa17.59■□□□□ 0.41
AP000550.1-201ENST00000420508 ALDH1L1O75891 902 aa17.58■□□□□ 0.41
AP000550.1-201ENST00000420508 CNNM1Q9NRU3 951 aa17.58■□□□□ 0.41
AP000550.1-201ENST00000420508 STARD3NLO95772 234 aa17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 TBC1D9Q6ZT07 1266 aa17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 SDF4Q9BRK5 362 aa17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 PCDHB15Q9Y5E8 787 aa17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 RBM33Q96EV2 1170 aaKnown RBP17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 TEX13AQ9BXU3 409 aaPredicted RBP17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 IPO7O95373 1038 aaKnown RBP17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 PIP4K2AP48426 406 aaPredicted RBP17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 LARP1BQ659C4 914 aaKnown RBP17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 EVI5LQ96CN4 794 aa17.58■□□□□ 0.4
AP000550.1-201ENST00000420508 JAKMIP1Q96N16 626 aaKnown RBP17.57■□□□□ 0.4
AP000550.1-201ENST00000420508 C8orf34Q49A92 452 aa17.57■□□□□ 0.4
AP000550.1-201ENST00000420508 FMNL2Q96PY5 1086 aa17.57■□□□□ 0.4
AP000550.1-201ENST00000420508 GPS2Q13227 327 aa17.57■□□□□ 0.4
AP000550.1-201ENST00000420508 CCDC70Q6NSX1 233 aa17.57■□□□□ 0.4
AP000550.1-201ENST00000420508 ANO8Q9HCE9 1232 aaPredicted RBP17.57■□□□□ 0.4
AP000550.1-201ENST00000420508 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
AP000550.1-201ENST00000420508 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
AP000550.1-201ENST00000420508 LRRFIP2Q9Y608 721 aaKnown RBP17.56■□□□□ 0.4
AP000550.1-201ENST00000420508 VAMP4O75379 141 aa17.56■□□□□ 0.4
AP000550.1-201ENST00000420508 IFNL2Q8IZJ0 200 aa17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 ECHDC1Q9NTX5 307 aa17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 ZBTB40Q9NUA8 1239 aa17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 CWC27Q6UX04 472 aaKnown RBP17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 MYL6BP14649 208 aa17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 RBM42Q9BTD8 480 aaKnown RBP17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 KDM2BQ8NHM5 1336 aa17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 FIBPO43427 364 aa17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 WASF1Q92558 559 aa17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 U3KPZ7 1027 aaPredicted RBP17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 HECW2Q9P2P5 1572 aa17.55■□□□□ 0.4
AP000550.1-201ENST00000420508 TRIM22Q8IYM9 498 aa17.54■□□□□ 0.4
AP000550.1-201ENST00000420508 STK38Q15208 465 aa17.54■□□□□ 0.4
AP000550.1-201ENST00000420508 AKAP4Q5JQC9 854 aa17.54■□□□□ 0.4
AP000550.1-201ENST00000420508 HMG20BQ9P0W2 317 aa17.54■□□□□ 0.4
AP000550.1-201ENST00000420508 AEBP2Q6ZN18 517 aaPredicted RBP17.54■□□□□ 0.4
AP000550.1-201ENST00000420508 DACH1Q9UI36 760 aa17.54■□□□□ 0.4
AP000550.1-201ENST00000420508 CADPS2Q86UW7 1296 aa17.54■□□□□ 0.4
AP000550.1-201ENST00000420508 TRIM34Q9BYJ4 488 aa17.53■□□□□ 0.4
AP000550.1-201ENST00000420508 DCTPP1Q9H773 170 aa17.53■□□□□ 0.4
AP000550.1-201ENST00000420508 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
AP000550.1-201ENST00000420508 LIMCH1Q9UPQ0 1083 aa17.53■□□□□ 0.4
AP000550.1-201ENST00000420508 SCAND2PQ9GZW5 306 aaPredicted RBP17.53■□□□□ 0.4
AP000550.1-201ENST00000420508 SBNO1A3KN83 1393 aa17.53■□□□□ 0.4
AP000550.1-201ENST00000420508 HOXB7P09629 217 aa17.53■□□□□ 0.4
AP000550.1-201ENST00000420508 SIL1Q9H173 461 aa17.53■□□□□ 0.4
AP000550.1-201ENST00000420508 NUTM1Q86Y26 1132 aa17.52■□□□□ 0.4
AP000550.1-201ENST00000420508 MAP3K5Q99683 1374 aa17.52■□□□□ 0.4
AP000550.1-201ENST00000420508 ERVK-7P63135 1459 aa17.52■□□□□ 0.4
AP000550.1-201ENST00000420508 ATP8B2P98198 1209 aa17.52■□□□□ 0.4
AP000550.1-201ENST00000420508 KRT28Q7Z3Y7 464 aa17.52■□□□□ 0.4
AP000550.1-201ENST00000420508 TNMDQ9H2S6 317 aa17.52■□□□□ 0.39
AP000550.1-201ENST00000420508 IMMTQ16891 758 aaKnown RBP17.51■□□□□ 0.39
AP000550.1-201ENST00000420508 CASTP20810 708 aaKnown RBP17.51■□□□□ 0.39
AP000550.1-201ENST00000420508 STRN4Q9NRL3 753 aa17.51■□□□□ 0.39
AP000550.1-201ENST00000420508 TRIM5Q9C035 493 aa17.51■□□□□ 0.39
AP000550.1-201ENST00000420508 ATP7BP35670 1465 aa17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 TRPM1Q7Z4N2 1603 aa17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 F6X3S4 739 aa17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 SMARCA5O60264 1052 aaPredicted RBP17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 SPATA32Q96LK8 384 aa17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 ARGLU1Q9NWB6 273 aaPredicted RBP17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 ZC3H6P61129 1189 aaKnown RBP17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 HSP90AB2PQ58FF8 381 aa17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 TXLNAP40222 546 aa17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 MPHOSPH8Q99549 860 aa17.5■□□□□ 0.39
AP000550.1-201ENST00000420508 NUP62CLQ9H1M0 184 aa17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 LAMC1P11047 1609 aa17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 IL13P35225 146 aa17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 TTC41PQ6P2S7 1318 aa17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 KIAA0232Q92628 1395 aa17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 SNRPA1P09661 255 aaKnown RBP17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 CCDC183Q5T5S1 534 aa17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 ANKRD24Q8TF21 1146 aa17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 TMOD3Q9NYL9 352 aa17.49■□□□□ 0.39
AP000550.1-201ENST00000420508 EFCAB6Q5THR3 1501 aa17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 ARHGEF10O15013 1369 aa17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 FAM83GA6ND36 823 aa17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 HOMER1Q86YM7 354 aa17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 C8orf58Q8NAV2 365 aa17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 RNF214Q8ND24 703 aa17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 ZNF652Q9Y2D9 606 aa17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 DDX54Q8TDD1 881 aaKnown RBP17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 MYD88Q99836 296 aa17.48■□□□□ 0.39
AP000550.1-201ENST00000420508 ARHGAP31Q2M1Z3 1444 aa17.47■□□□□ 0.39
AP000550.1-201ENST00000420508 AATKQ6ZMQ8 1374 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms