RNA–Protein interactions for RNA: ENST00000420421.1

PMS1-207, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 3

Gene PMS1, Length 331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-207ENST00000420421 RTF1Q92541 710 aaKnown RBP6.7□□□□□ -1.34
PMS1-207ENST00000420421 ZNF428Q96B54 188 aa6.7□□□□□ -1.34
PMS1-207ENST00000420421 LTV1Q96GA3 475 aaPredicted RBP6.7□□□□□ -1.34
PMS1-207ENST00000420421 CARD10Q9BWT7 1032 aa6.7□□□□□ -1.34
PMS1-207ENST00000420421 CHMP4AQ9BY43 222 aa6.7□□□□□ -1.34
PMS1-207ENST00000420421 THRAP3Q9Y2W1 955 aaKnown RBP6.7□□□□□ -1.34
PMS1-207ENST00000420421 WNK3Q9BYP7 1800 aa6.7□□□□□ -1.34
PMS1-207ENST00000420421 COL5A2P05997 1499 aaPredicted RBP6.7□□□□□ -1.34
PMS1-207ENST00000420421 OVOS2A0A0G2JMS6 1433 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 FAM83GA6ND36 823 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 GNAT3A8MTJ3 354 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 HSP90AB1P08238 724 aaKnown RBP6.69□□□□□ -1.34
PMS1-207ENST00000420421 PRR29P0C7W0 189 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 AKAP4Q5JQC9 854 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 DUSP27Q5VZP5 1158 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 PHACTR3Q96KR7 559 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 CDCA7Q9BWT1 371 aaPredicted RBP6.69□□□□□ -1.34
PMS1-207ENST00000420421 MFRPQ9BY79 579 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 IFT57Q9NWB7 429 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 NLRP2Q9NX02 1062 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 TRIM35Q9UPQ4 493 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 SPG7Q9UQ90 795 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 NRAPQ86VF7 1730 aa6.69□□□□□ -1.34
PMS1-207ENST00000420421 CRB1P82279 1406 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 ADAMTS7Q9UKP4 1686 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 SIPA1L3O60292 1781 aaPredicted RBP6.68□□□□□ -1.34
PMS1-207ENST00000420421 PDAP1Q13442 181 aaKnown RBP6.68□□□□□ -1.34
PMS1-207ENST00000420421 CHRNA2Q15822 529 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 MTHFSDQ2M296 383 aaKnown RBP6.68□□□□□ -1.34
PMS1-207ENST00000420421 C1orf141Q5JVX7 400 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 ERICH6BQ5W0A0 696 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 TOM1L2Q6ZVM7 507 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 AEBP1Q8IUX7 1158 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 KRI1Q8N9T8 703 aaKnown RBP6.68□□□□□ -1.34
PMS1-207ENST00000420421 KDM4CQ9H3R0 1056 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 SALL2Q9Y467 1007 aaPredicted RBP6.68□□□□□ -1.34
PMS1-207ENST00000420421 SOS1Q07889 1333 aaPredicted RBP6.68□□□□□ -1.34
PMS1-207ENST00000420421 MAP3K5Q99683 1374 aa6.68□□□□□ -1.34
PMS1-207ENST00000420421 SLIT2O94813 1529 aa6.67□□□□□ -1.34
PMS1-207ENST00000420421 ZNF853P0CG23 659 aa6.67□□□□□ -1.34
PMS1-207ENST00000420421 IFNL2Q8IZJ0 200 aa6.67□□□□□ -1.34
PMS1-207ENST00000420421 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.67□□□□□ -1.34
PMS1-207ENST00000420421 BTG4Q9NY30 223 aa6.67□□□□□ -1.34
PMS1-207ENST00000420421 CLEC11AQ9Y240 323 aa6.67□□□□□ -1.34
PMS1-207ENST00000420421 LRRC37A3O60309 1634 aa6.67□□□□□ -1.34
PMS1-207ENST00000420421 IL2RBP14784 551 aa6.66□□□□□ -1.34
PMS1-207ENST00000420421 GPIHBP1Q8IV16 184 aa6.66□□□□□ -1.34
PMS1-207ENST00000420421 FNBP4Q8N3X1 1017 aaPredicted RBP6.66□□□□□ -1.34
PMS1-207ENST00000420421 CDCA7LQ96GN5 454 aa6.66□□□□□ -1.34
PMS1-207ENST00000420421 RCAN3Q9UKA8 241 aa6.66□□□□□ -1.34
PMS1-207ENST00000420421 RRP7AQ9Y3A4 280 aaKnown RBP6.66□□□□□ -1.34
PMS1-207ENST00000420421 RNF123Q5XPI4 1314 aa6.66□□□□□ -1.34
PMS1-207ENST00000420421 CEMIPQ8WUJ3 1361 aa6.66□□□□□ -1.34
PMS1-207ENST00000420421 SHANK3Q9BYB0 1731 aa6.65□□□□□ -1.34
PMS1-207ENST00000420421 KDM3BQ7LBC6 1761 aa6.65□□□□□ -1.34
PMS1-207ENST00000420421 CHL1O00533 1208 aa6.65□□□□□ -1.34
PMS1-207ENST00000420421 PPP1R37O75864 691 aa6.65□□□□□ -1.34
PMS1-207ENST00000420421 NEFLP07196 543 aa6.65□□□□□ -1.34
PMS1-207ENST00000420421 TAF7Q15545 349 aaPredicted RBP6.65□□□□□ -1.34
PMS1-207ENST00000420421 ZNF530Q6P9A1 599 aaPredicted RBP6.65□□□□□ -1.34
PMS1-207ENST00000420421 UNC5CLQ8IV45 518 aa6.65□□□□□ -1.34
PMS1-207ENST00000420421 ZCRB1Q8TBF4 217 aaKnown RBP6.65□□□□□ -1.34
PMS1-207ENST00000420421 C1orf115Q9H7X2 142 aa6.65□□□□□ -1.34
PMS1-207ENST00000420421 PCDH11XQ9BZA7 1347 aa6.65□□□□□ -1.35
PMS1-207ENST00000420421 PCDH11YQ9BZA8 1340 aa6.65□□□□□ -1.35
PMS1-207ENST00000420421 ITGB4P16144 1822 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 RNMTO43148 476 aaKnown RBP6.64□□□□□ -1.35
PMS1-207ENST00000420421 MS4A1P11836 297 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 HSPA1LP34931 641 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 ALDH1L2Q3SY69 923 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 LARP1Q6PKG0 1096 aaKnown RBP6.64□□□□□ -1.35
PMS1-207ENST00000420421 USHBP1Q8N6Y0 703 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 DCAF5Q96JK2 942 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 STRN4Q9NRL3 753 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 SPATA31A1Q5TZJ5 1347 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 FANCIQ9NVI1 1328 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 LRP6O75581 1613 aa6.64□□□□□ -1.35
PMS1-207ENST00000420421 NUTM2BA6NNL0 878 aaPredicted RBP6.63□□□□□ -1.35
PMS1-207ENST00000420421 DISP2A7MBM2 1401 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 NUTM2EB1AL46 878 aaPredicted RBP6.63□□□□□ -1.35
PMS1-207ENST00000420421 ERVV-2B6SEH9 535 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 EXOC5O00471 708 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 MEGF6O75095 1541 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 ADAMTS2O95450 1211 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 HOXB7P09629 217 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 PDIA4P13667 645 aaKnown RBP6.63□□□□□ -1.35
PMS1-207ENST00000420421 PHKG2P15735 406 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 TEFQ10587 303 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 MKRN3Q13064 507 aaKnown RBP6.63□□□□□ -1.35
PMS1-207ENST00000420421 VPS72Q15906 364 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 SPATA31A5Q5VU36 1347 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 NUTM2AQ8IVF1 878 aaPredicted RBP6.63□□□□□ -1.35
PMS1-207ENST00000420421 SPATA31A7Q8IWB4 1347 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 IL17REQ8NFR9 667 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 NGLY1Q96IV0 654 aa6.63□□□□□ -1.35
PMS1-207ENST00000420421 CCDC9Q9Y3X0 531 aaKnown RBP6.63□□□□□ -1.35
PMS1-207ENST00000420421 SUPT16HQ9Y5B9 1047 aaKnown RBP6.63□□□□□ -1.35
PMS1-207ENST00000420421 MRC1P22897 1456 aa6.62□□□□□ -1.35
PMS1-207ENST00000420421 APBB1O00213 710 aa6.62□□□□□ -1.35
PMS1-207ENST00000420421 PDE4DQ08499 809 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms