RNA–Protein interactions for RNA: ENST00000420103.1

CHCHD4-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 4, humanhuman

TSL 3

Gene CHCHD4, Length 584 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD4-203ENST00000420103 CLSPNQ9HAW4 1339 aa16.27■□□□□ 0.2
CHCHD4-203ENST00000420103 MMP10P09238 476 aa16.27■□□□□ 0.2
CHCHD4-203ENST00000420103 EIF4A2Q14240 407 aaKnown RBP16.26■□□□□ 0.19
CHCHD4-203ENST00000420103 PXDNLA1KZ92 1463 aa16.26■□□□□ 0.19
CHCHD4-203ENST00000420103 A0A0G2JLW4 131 aa16.25■□□□□ 0.19
CHCHD4-203ENST00000420103 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
CHCHD4-203ENST00000420103 CDCA8Q53HL2 280 aa16.25■□□□□ 0.19
CHCHD4-203ENST00000420103 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.25■□□□□ 0.19
CHCHD4-203ENST00000420103 TIMELESSQ9UNS1 1208 aa16.25■□□□□ 0.19
CHCHD4-203ENST00000420103 KIAA1551Q9HCM1 1747 aa16.25■□□□□ 0.19
CHCHD4-203ENST00000420103 KDRP35968 1356 aa16.25■□□□□ 0.19
CHCHD4-203ENST00000420103 IFNL2Q8IZJ0 200 aa16.24■□□□□ 0.19
CHCHD4-203ENST00000420103 ARHGEF1Q92888 912 aaKnown RBP16.23■□□□□ 0.19
CHCHD4-203ENST00000420103 POLR3GLQ9BT43 218 aa16.23■□□□□ 0.19
CHCHD4-203ENST00000420103 CICQ96RK0 1608 aaPredicted RBP16.21■□□□□ 0.19
CHCHD4-203ENST00000420103 DPEP1P16444 411 aa16.21■□□□□ 0.19
CHCHD4-203ENST00000420103 BCS1LQ9Y276 419 aa16.21■□□□□ 0.19
CHCHD4-203ENST00000420103 N4BP2Q86UW6 1770 aaPredicted RBP16.21■□□□□ 0.18
CHCHD4-203ENST00000420103 HSPA5P11021 654 aaKnown RBP16.2■□□□□ 0.18
CHCHD4-203ENST00000420103 GYS1P13807 737 aa16.2■□□□□ 0.18
CHCHD4-203ENST00000420103 KCNA3P22001 575 aa16.2■□□□□ 0.18
CHCHD4-203ENST00000420103 HMGB2P26583 209 aaKnown RBP16.2■□□□□ 0.18
CHCHD4-203ENST00000420103 TRAPPC3LQ5T215 181 aa16.2■□□□□ 0.18
CHCHD4-203ENST00000420103 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
CHCHD4-203ENST00000420103 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
CHCHD4-203ENST00000420103 C10orf71Q711Q0 1435 aa16.19■□□□□ 0.18
CHCHD4-203ENST00000420103 AEBP1Q8IUX7 1158 aa16.19■□□□□ 0.18
CHCHD4-203ENST00000420103 CCER1Q8TC90 406 aaPredicted RBP16.19■□□□□ 0.18
CHCHD4-203ENST00000420103 NMRK2Q9NPI5 230 aa16.19■□□□□ 0.18
CHCHD4-203ENST00000420103 RTCBQ9Y3I0 505 aaKnown RBP16.19■□□□□ 0.18
CHCHD4-203ENST00000420103 KIF13BQ9NQT8 1826 aa16.18■□□□□ 0.18
CHCHD4-203ENST00000420103 DNAJC5GQ8N7S2 189 aa16.18■□□□□ 0.18
CHCHD4-203ENST00000420103 ERVV-2B6SEH9 535 aa16.17■□□□□ 0.18
CHCHD4-203ENST00000420103 TGFB2P61812 414 aa16.17■□□□□ 0.18
CHCHD4-203ENST00000420103 ARHGAP27Q6ZUM4 889 aa16.17■□□□□ 0.18
CHCHD4-203ENST00000420103 NLGN1Q8N2Q7 840 aa16.17■□□□□ 0.18
CHCHD4-203ENST00000420103 SRP68Q9UHB9 627 aaKnown RBP16.17■□□□□ 0.18
CHCHD4-203ENST00000420103 RPS6KA4O75676 772 aa16.16■□□□□ 0.18
CHCHD4-203ENST00000420103 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
CHCHD4-203ENST00000420103 PCNTO95613 3336 aa16.16■□□□□ 0.18
CHCHD4-203ENST00000420103 MYH14Q7Z406 1995 aaKnown RBP16.16■□□□□ 0.18
CHCHD4-203ENST00000420103 CNTNAP4Q9C0A0 1308 aa16.16■□□□□ 0.18
CHCHD4-203ENST00000420103 PTCD1O75127 700 aaKnown RBP16.15■□□□□ 0.18
CHCHD4-203ENST00000420103 FCHSD2O94868 740 aa16.15■□□□□ 0.18
CHCHD4-203ENST00000420103 EIF4G2P78344 907 aaKnown RBP eCLIP16.15■□□□□ 0.18
CHCHD4-203ENST00000420103 HTRA3P83110 453 aa16.15■□□□□ 0.18
CHCHD4-203ENST00000420103 DDR1Q08345 913 aa16.15■□□□□ 0.18
CHCHD4-203ENST00000420103 COL5A3P25940 1745 aaPredicted RBP16.14■□□□□ 0.17
CHCHD4-203ENST00000420103 RFC4P35249 363 aa16.14■□□□□ 0.17
CHCHD4-203ENST00000420103 FKBP8Q14318 412 aa16.14■□□□□ 0.17
CHCHD4-203ENST00000420103 ZNF530Q6P9A1 599 aaPredicted RBP16.14■□□□□ 0.17
CHCHD4-203ENST00000420103 DCAF5Q96JK2 942 aa16.14■□□□□ 0.17
CHCHD4-203ENST00000420103 C4AP0C0L4 1744 aa16.14■□□□□ 0.17
CHCHD4-203ENST00000420103 TOMM70O94826 608 aa16.13■□□□□ 0.17
CHCHD4-203ENST00000420103 CABP4P57796 275 aa16.13■□□□□ 0.17
CHCHD4-203ENST00000420103 NFATC2IPQ8NCF5 419 aa16.13■□□□□ 0.17
CHCHD4-203ENST00000420103 PANK3Q9H999 370 aa16.13■□□□□ 0.17
CHCHD4-203ENST00000420103 CCDC87Q9NVE4 849 aa16.13■□□□□ 0.17
CHCHD4-203ENST00000420103 ADRA2BP18089 450 aa16.12■□□□□ 0.17
CHCHD4-203ENST00000420103 CHRNA5P30532 468 aa16.12■□□□□ 0.17
CHCHD4-203ENST00000420103 CRKLP46109 303 aaKnown RBP16.12■□□□□ 0.17
CHCHD4-203ENST00000420103 PLEKHO1Q53GL0 409 aaPredicted RBP16.12■□□□□ 0.17
CHCHD4-203ENST00000420103 C9orf131Q5VYM1 1079 aa16.12■□□□□ 0.17
CHCHD4-203ENST00000420103 INTS5Q6P9B9 1019 aaKnown RBP16.11■□□□□ 0.17
CHCHD4-203ENST00000420103 PARP3Q9Y6F1 533 aa16.11■□□□□ 0.17
CHCHD4-203ENST00000420103 ZNF831Q5JPB2 1677 aa16.11■□□□□ 0.17
CHCHD4-203ENST00000420103 BRCA1P38398 1863 aaKnown RBP16.1■□□□□ 0.17
CHCHD4-203ENST00000420103 MTHFSP49914 203 aa16.1■□□□□ 0.17
CHCHD4-203ENST00000420103 APLP1P51693 650 aa16.1■□□□□ 0.17
CHCHD4-203ENST00000420103 HSP90AB1P08238 724 aaKnown RBP16.09■□□□□ 0.17
CHCHD4-203ENST00000420103 USP42Q9H9J4 1324 aaKnown RBP16.09■□□□□ 0.17
CHCHD4-203ENST00000420103 PRELPP51888 382 aa16.08■□□□□ 0.16
CHCHD4-203ENST00000420103 SULT6B1Q6IMI4 303 aa16.08■□□□□ 0.16
CHCHD4-203ENST00000420103 PLEKHG2Q9H7P9 1386 aa16.08■□□□□ 0.16
CHCHD4-203ENST00000420103 ADAMTS7Q9UKP4 1686 aa16.08■□□□□ 0.16
CHCHD4-203ENST00000420103 TJP1Q07157 1748 aa16.08■□□□□ 0.16
CHCHD4-203ENST00000420103 POLRMTO00411 1230 aaKnown RBP16.07■□□□□ 0.16
CHCHD4-203ENST00000420103 TM4SF1P30408 202 aa16.07■□□□□ 0.16
CHCHD4-203ENST00000420103 AMOTQ4VCS5 1084 aa16.07■□□□□ 0.16
CHCHD4-203ENST00000420103 DNAJC10Q8IXB1 793 aa16.07■□□□□ 0.16
CHCHD4-203ENST00000420103 LGR6Q9HBX8 967 aa16.07■□□□□ 0.16
CHCHD4-203ENST00000420103 PIM2Q9P1W9 311 aa16.07■□□□□ 0.16
CHCHD4-203ENST00000420103 KCPQ6ZWJ8 1503 aa16.07■□□□□ 0.16
CHCHD4-203ENST00000420103 IL13P35225 146 aa16.06■□□□□ 0.16
CHCHD4-203ENST00000420103 DALRD3Q5D0E6 543 aaKnown RBP16.06■□□□□ 0.16
CHCHD4-203ENST00000420103 SLC39A6Q13433 755 aa16.05■□□□□ 0.16
CHCHD4-203ENST00000420103 RRAGCQ9HB90 399 aa16.05■□□□□ 0.16
CHCHD4-203ENST00000420103 RNF181Q9P0P0 153 aa16.05■□□□□ 0.16
CHCHD4-203ENST00000420103 RASSF7Q02833 373 aa16.04■□□□□ 0.16
CHCHD4-203ENST00000420103 C1orf141Q5JVX7 400 aa16.04■□□□□ 0.16
CHCHD4-203ENST00000420103 USPL1Q5W0Q7 1092 aa16.04■□□□□ 0.16
CHCHD4-203ENST00000420103 MORC1Q86VD1 984 aa16.04■□□□□ 0.16
CHCHD4-203ENST00000420103 RBM46Q8TBY0 533 aaKnown RBP16.04■□□□□ 0.16
CHCHD4-203ENST00000420103 BCL2L12Q9HB09 334 aa16.04■□□□□ 0.16
CHCHD4-203ENST00000420103 KIF7Q2M1P5 1343 aa16.03■□□□□ 0.16
CHCHD4-203ENST00000420103 ARFGEF1Q9Y6D6 1849 aa16.03■□□□□ 0.16
CHCHD4-203ENST00000420103 SOS1Q07889 1333 aaPredicted RBP16.02■□□□□ 0.16
CHCHD4-203ENST00000420103 CYP19A1P11511 503 aaPredicted RBP16.02■□□□□ 0.16
CHCHD4-203ENST00000420103 NFIXQ14938 502 aa16.02■□□□□ 0.16
CHCHD4-203ENST00000420103 COL13A1Q5TAT6 717 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms