RNA–Protein interactions for RNA: ENST00000420058.1

NFE4-201, Transcript of nuclear factor, erythroid 4, humanhuman

TSL 1 (best)

Gene NFE4, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4-201ENST00000420058 IFNL2Q8IZJ0 200 aa19.8■□□□□ 0.76
NFE4-201ENST00000420058 MMP10P09238 476 aa19.78■□□□□ 0.76
NFE4-201ENST00000420058 EIF4A2Q14240 407 aaKnown RBP19.78■□□□□ 0.76
NFE4-201ENST00000420058 ANKRD26Q9UPS8 1709 aa19.77■□□□□ 0.76
NFE4-201ENST00000420058 KDRP35968 1356 aa19.76■□□□□ 0.75
NFE4-201ENST00000420058 PXDNLA1KZ92 1463 aa19.75■□□□□ 0.75
NFE4-201ENST00000420058 A0A0G2JLW4 131 aa19.74■□□□□ 0.75
NFE4-201ENST00000420058 TRAPPC3LQ5T215 181 aa19.74■□□□□ 0.75
NFE4-201ENST00000420058 ARHGEF1Q92888 912 aaKnown RBP19.74■□□□□ 0.75
NFE4-201ENST00000420058 ERVV-2B6SEH9 535 aa19.73■□□□□ 0.75
NFE4-201ENST00000420058 TGFB2P61812 414 aa19.73■□□□□ 0.75
NFE4-201ENST00000420058 RC3H1Q5TC82 1133 aaKnown RBP19.73■□□□□ 0.75
NFE4-201ENST00000420058 CICQ96RK0 1608 aaPredicted RBP19.73■□□□□ 0.75
NFE4-201ENST00000420058 GYS1P13807 737 aa19.72■□□□□ 0.75
NFE4-201ENST00000420058 NLGN1Q8N2Q7 840 aa19.72■□□□□ 0.75
NFE4-201ENST00000420058 KIAA1551Q9HCM1 1747 aa19.72■□□□□ 0.75
NFE4-201ENST00000420058 RTCBQ9Y3I0 505 aaKnown RBP19.72■□□□□ 0.75
NFE4-201ENST00000420058 KCNA3P22001 575 aa19.71■□□□□ 0.75
NFE4-201ENST00000420058 TNNT2P45379 298 aaPredicted RBP19.71■□□□□ 0.75
NFE4-201ENST00000420058 KIF13BQ9NQT8 1826 aa19.7■□□□□ 0.74
NFE4-201ENST00000420058 RPS6KA4O75676 772 aa19.7■□□□□ 0.74
NFE4-201ENST00000420058 DPEP1P16444 411 aa19.7■□□□□ 0.74
NFE4-201ENST00000420058 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
NFE4-201ENST00000420058 C10orf71Q711Q0 1435 aa19.69■□□□□ 0.74
NFE4-201ENST00000420058 DNAJC5GQ8N7S2 189 aa19.69■□□□□ 0.74
NFE4-201ENST00000420058 DCAF5Q96JK2 942 aa19.69■□□□□ 0.74
NFE4-201ENST00000420058 RBM42Q9BTD8 480 aaKnown RBP19.69■□□□□ 0.74
NFE4-201ENST00000420058 BCS1LQ9Y276 419 aa19.69■□□□□ 0.74
NFE4-201ENST00000420058 CNTNAP4Q9C0A0 1308 aa19.69■□□□□ 0.74
NFE4-201ENST00000420058 ADRA2BP18089 450 aa19.68■□□□□ 0.74
NFE4-201ENST00000420058 MYH14Q7Z406 1995 aaKnown RBP19.68■□□□□ 0.74
NFE4-201ENST00000420058 KDM6AO15550 1401 aaPredicted RBP19.68■□□□□ 0.74
NFE4-201ENST00000420058 N4BP2Q86UW6 1770 aaPredicted RBP19.67■□□□□ 0.74
NFE4-201ENST00000420058 ARHGAP27Q6ZUM4 889 aa19.66■□□□□ 0.74
NFE4-201ENST00000420058 ZNF831Q5JPB2 1677 aa19.65■□□□□ 0.74
NFE4-201ENST00000420058 PLEKHO1Q53GL0 409 aaPredicted RBP19.65■□□□□ 0.74
NFE4-201ENST00000420058 NMRK2Q9NPI5 230 aa19.65■□□□□ 0.74
NFE4-201ENST00000420058 PCNTO95613 3336 aa19.65■□□□□ 0.74
NFE4-201ENST00000420058 TOMM70O94826 608 aa19.64■□□□□ 0.73
NFE4-201ENST00000420058 HSP90AB1P08238 724 aaKnown RBP19.64■□□□□ 0.73
NFE4-201ENST00000420058 RFC4P35249 363 aa19.64■□□□□ 0.73
NFE4-201ENST00000420058 ZNF530Q6P9A1 599 aaPredicted RBP19.64■□□□□ 0.73
NFE4-201ENST00000420058 AEBP1Q8IUX7 1158 aa19.64■□□□□ 0.73
NFE4-201ENST00000420058 CCDC87Q9NVE4 849 aa19.64■□□□□ 0.73
NFE4-201ENST00000420058 TIMELESSQ9UNS1 1208 aa19.64■□□□□ 0.73
NFE4-201ENST00000420058 FCHSD2O94868 740 aa19.63■□□□□ 0.73
NFE4-201ENST00000420058 CABP4P57796 275 aa19.63■□□□□ 0.73
NFE4-201ENST00000420058 SRP68Q9UHB9 627 aaKnown RBP19.63■□□□□ 0.73
NFE4-201ENST00000420058 COL5A3P25940 1745 aaPredicted RBP19.62■□□□□ 0.73
NFE4-201ENST00000420058 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
NFE4-201ENST00000420058 APLP1P51693 650 aa19.62■□□□□ 0.73
NFE4-201ENST00000420058 DDR1Q08345 913 aa19.62■□□□□ 0.73
NFE4-201ENST00000420058 FKBP8Q14318 412 aa19.62■□□□□ 0.73
NFE4-201ENST00000420058 AMOTQ4VCS5 1084 aa19.62■□□□□ 0.73
NFE4-201ENST00000420058 NFATC2IPQ8NCF5 419 aa19.62■□□□□ 0.73
NFE4-201ENST00000420058 PANK3Q9H999 370 aa19.62■□□□□ 0.73
NFE4-201ENST00000420058 PARP3Q9Y6F1 533 aa19.62■□□□□ 0.73
NFE4-201ENST00000420058 C4AP0C0L4 1744 aa19.62■□□□□ 0.73
NFE4-201ENST00000420058 CRKLP46109 303 aaKnown RBP19.61■□□□□ 0.73
NFE4-201ENST00000420058 MTHFSP49914 203 aa19.61■□□□□ 0.73
NFE4-201ENST00000420058 POLR3GLQ9BT43 218 aa19.61■□□□□ 0.73
NFE4-201ENST00000420058 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
NFE4-201ENST00000420058 C9orf131Q5VYM1 1079 aa19.6■□□□□ 0.73
NFE4-201ENST00000420058 INTS5Q6P9B9 1019 aaKnown RBP19.6■□□□□ 0.73
NFE4-201ENST00000420058 BRCA1P38398 1863 aaKnown RBP19.6■□□□□ 0.73
NFE4-201ENST00000420058 USP42Q9H9J4 1324 aaKnown RBP19.58■□□□□ 0.73
NFE4-201ENST00000420058 TM4SF1P30408 202 aa19.58■□□□□ 0.72
NFE4-201ENST00000420058 PIM2Q9P1W9 311 aa19.58■□□□□ 0.72
NFE4-201ENST00000420058 CHRNA5P30532 468 aa19.56■□□□□ 0.72
NFE4-201ENST00000420058 IL13P35225 146 aa19.56■□□□□ 0.72
NFE4-201ENST00000420058 SULT6B1Q6IMI4 303 aa19.56■□□□□ 0.72
NFE4-201ENST00000420058 RBM46Q8TBY0 533 aaKnown RBP19.56■□□□□ 0.72
NFE4-201ENST00000420058 POLRMTO00411 1230 aaKnown RBP19.55■□□□□ 0.72
NFE4-201ENST00000420058 HSPA5P11021 654 aaKnown RBP19.55■□□□□ 0.72
NFE4-201ENST00000420058 DALRD3Q5D0E6 543 aaKnown RBP19.55■□□□□ 0.72
NFE4-201ENST00000420058 HTRA3P83110 453 aa19.54■□□□□ 0.72
NFE4-201ENST00000420058 C1orf141Q5JVX7 400 aa19.54■□□□□ 0.72
NFE4-201ENST00000420058 PIAS4Q8N2W9 510 aaPredicted RBP19.54■□□□□ 0.72
NFE4-201ENST00000420058 LGR6Q9HBX8 967 aa19.54■□□□□ 0.72
NFE4-201ENST00000420058 ADAMTS7Q9UKP4 1686 aa19.54■□□□□ 0.72
NFE4-201ENST00000420058 ARFGEF1Q9Y6D6 1849 aa19.53■□□□□ 0.72
NFE4-201ENST00000420058 MORC1Q86VD1 984 aa19.53■□□□□ 0.72
NFE4-201ENST00000420058 DNAJC10Q8IXB1 793 aa19.53■□□□□ 0.72
NFE4-201ENST00000420058 TJP1Q07157 1748 aa19.51■□□□□ 0.71
NFE4-201ENST00000420058 CYP19A1P11511 503 aaPredicted RBP19.51■□□□□ 0.71
NFE4-201ENST00000420058 PRELPP51888 382 aa19.51■□□□□ 0.71
NFE4-201ENST00000420058 USPL1Q5W0Q7 1092 aa19.51■□□□□ 0.71
NFE4-201ENST00000420058 RRAGCQ9HB90 399 aa19.51■□□□□ 0.71
NFE4-201ENST00000420058 RNF181Q9P0P0 153 aa19.51■□□□□ 0.71
NFE4-201ENST00000420058 SOS1Q07889 1333 aaPredicted RBP19.51■□□□□ 0.71
NFE4-201ENST00000420058 EIF4G2P78344 907 aaKnown RBP eCLIP19.5■□□□□ 0.71
NFE4-201ENST00000420058 SLC52A2Q9HAB3 445 aa19.5■□□□□ 0.71
NFE4-201ENST00000420058 BCL2L12Q9HB09 334 aa19.5■□□□□ 0.71
NFE4-201ENST00000420058 KCPQ6ZWJ8 1503 aa19.5■□□□□ 0.71
NFE4-201ENST00000420058 SLC39A6Q13433 755 aa19.49■□□□□ 0.71
NFE4-201ENST00000420058 AKAP4Q5JQC9 854 aa19.49■□□□□ 0.71
NFE4-201ENST00000420058 FSTL1Q12841 308 aa19.48■□□□□ 0.71
NFE4-201ENST00000420058 NFIXQ14938 502 aa19.48■□□□□ 0.71
NFE4-201ENST00000420058 JMYQ8N9B5 988 aa19.48■□□□□ 0.71
NFE4-201ENST00000420058 KLRG1Q96E93 195 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms