RNA–Protein interactions for RNA: ENST00000420042.1

RARA-205, Transcript of retinoic acid receptor alpha, humanhuman

TSL 3

Gene RARA, Length 1,052 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-205ENST00000420042 MTHFSP49914 203 aa20.52■□□□□ 0.88
RARA-205ENST00000420042 CC2D1BQ5T0F9 858 aaKnown RBP20.52■□□□□ 0.88
RARA-205ENST00000420042 PELP1Q8IZL8 1130 aaKnown RBP20.52■□□□□ 0.88
RARA-205ENST00000420042 COL24A1Q17RW2 1714 aa20.52■□□□□ 0.88
RARA-205ENST00000420042 TAF1LQ8IZX4 1826 aa20.51■□□□□ 0.87
RARA-205ENST00000420042 SSFA2P28290 1259 aa20.51■□□□□ 0.87
RARA-205ENST00000420042 ITPK1Q13572 414 aa20.51■□□□□ 0.87
RARA-205ENST00000420042 GNPATO15228 680 aa20.5■□□□□ 0.87
RARA-205ENST00000420042 NLGN2Q8NFZ4 835 aa20.5■□□□□ 0.87
RARA-205ENST00000420042 RBM42Q9BTD8 480 aaKnown RBP20.5■□□□□ 0.87
RARA-205ENST00000420042 SMIM5Q71RC9 77 aa20.49■□□□□ 0.87
RARA-205ENST00000420042 AMIGO3Q86WK7 504 aa20.49■□□□□ 0.87
RARA-205ENST00000420042 KDRP35968 1356 aa20.48■□□□□ 0.87
RARA-205ENST00000420042 KDM6AO15550 1401 aaPredicted RBP20.47■□□□□ 0.87
RARA-205ENST00000420042 CNGB1Q14028 1251 aaPredicted RBP20.47■□□□□ 0.87
RARA-205ENST00000420042 CD2APQ9Y5K6 639 aa20.46■□□□□ 0.87
RARA-205ENST00000420042 DIAPH1O60610 1272 aaKnown RBP20.45■□□□□ 0.86
RARA-205ENST00000420042 HMOX1P09601 288 aa20.45■□□□□ 0.86
RARA-205ENST00000420042 NFATC2IPQ8NCF5 419 aa20.45■□□□□ 0.86
RARA-205ENST00000420042 AKAP4Q5JQC9 854 aa20.44■□□□□ 0.86
RARA-205ENST00000420042 RTCBQ9Y3I0 505 aaKnown RBP20.44■□□□□ 0.86
RARA-205ENST00000420042 TRAPPC3LQ5T215 181 aa20.43■□□□□ 0.86
RARA-205ENST00000420042 SLC4A9Q96Q91 983 aa20.43■□□□□ 0.86
RARA-205ENST00000420042 UBR3Q6ZT12 1888 aa20.42■□□□□ 0.86
RARA-205ENST00000420042 GRIN3BO60391 1043 aa20.42■□□□□ 0.86
RARA-205ENST00000420042 PTCD1O75127 700 aaKnown RBP20.42■□□□□ 0.86
RARA-205ENST00000420042 ZNF784Q8NCA9 323 aaPredicted RBP20.42■□□□□ 0.86
RARA-205ENST00000420042 NPC1L1Q9UHC9 1359 aa20.42■□□□□ 0.86
RARA-205ENST00000420042 RC3H1Q5TC82 1133 aaKnown RBP20.41■□□□□ 0.86
RARA-205ENST00000420042 CNTNAP4Q9C0A0 1308 aa20.39■□□□□ 0.85
RARA-205ENST00000420042 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.85
RARA-205ENST00000420042 ADRA2BP18089 450 aa20.39■□□□□ 0.85
RARA-205ENST00000420042 RPS6KA4O75676 772 aa20.38■□□□□ 0.85
RARA-205ENST00000420042 ARHGEF1Q92888 912 aaKnown RBP20.38■□□□□ 0.85
RARA-205ENST00000420042 SLC52A2Q9HAB3 445 aa20.38■□□□□ 0.85
RARA-205ENST00000420042 LGR6Q9HBX8 967 aa20.38■□□□□ 0.85
RARA-205ENST00000420042 U2SURPO15042 1029 aaKnown RBP20.37■□□□□ 0.85
RARA-205ENST00000420042 RNMTO43148 476 aaKnown RBP20.37■□□□□ 0.85
RARA-205ENST00000420042 RFC4P35249 363 aa20.37■□□□□ 0.85
RARA-205ENST00000420042 MTHFSDQ2M296 383 aaKnown RBP20.37■□□□□ 0.85
RARA-205ENST00000420042 NLGN1Q8N2Q7 840 aa20.37■□□□□ 0.85
RARA-205ENST00000420042 ZNF831Q5JPB2 1677 aa20.36■□□□□ 0.85
RARA-205ENST00000420042 MMP10P09238 476 aa20.36■□□□□ 0.85
RARA-205ENST00000420042 CHD4Q14839 1912 aa20.35■□□□□ 0.85
RARA-205ENST00000420042 CRKLP46109 303 aaKnown RBP20.34■□□□□ 0.85
RARA-205ENST00000420042 CFAP53Q96M91 514 aa20.33■□□□□ 0.85
RARA-205ENST00000420042 UTRNP46939 3433 aa20.32■□□□□ 0.84
RARA-205ENST00000420042 GYS1P13807 737 aa20.32■□□□□ 0.84
RARA-205ENST00000420042 SCN11AQ9UI33 1791 aa20.31■□□□□ 0.84
RARA-205ENST00000420042 COL5A3P25940 1745 aaPredicted RBP20.31■□□□□ 0.84
RARA-205ENST00000420042 SLC39A6Q13433 755 aa20.31■□□□□ 0.84
RARA-205ENST00000420042 WWC3Q9ULE0 1092 aa20.31■□□□□ 0.84
RARA-205ENST00000420042 COL3A1P02461 1466 aaPredicted RBP20.3■□□□□ 0.84
RARA-205ENST00000420042 DNAJC10Q8IXB1 793 aa20.3■□□□□ 0.84
RARA-205ENST00000420042 GAS2L2Q8NHY3 880 aa20.3■□□□□ 0.84
RARA-205ENST00000420042 PARP3Q9Y6F1 533 aa20.3■□□□□ 0.84
RARA-205ENST00000420042 MRC1P22897 1456 aa20.29■□□□□ 0.84
RARA-205ENST00000420042 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
RARA-205ENST00000420042 INTS5Q6P9B9 1019 aaKnown RBP20.28■□□□□ 0.84
RARA-205ENST00000420042 CCDC87Q9NVE4 849 aa20.28■□□□□ 0.84
RARA-205ENST00000420042 NUDCQ9Y266 331 aa20.28■□□□□ 0.84
RARA-205ENST00000420042 TGFB2P61812 414 aa20.27■□□□□ 0.84
RARA-205ENST00000420042 TTC5Q8N0Z6 440 aa20.27■□□□□ 0.84
RARA-205ENST00000420042 SRP68Q9UHB9 627 aaKnown RBP20.27■□□□□ 0.84
RARA-205ENST00000420042 CYP19A1P11511 503 aaPredicted RBP20.26■□□□□ 0.83
RARA-205ENST00000420042 TEFQ10587 303 aa20.26■□□□□ 0.83
RARA-205ENST00000420042 CICQ96RK0 1608 aaPredicted RBP20.26■□□□□ 0.83
RARA-205ENST00000420042 USP42Q9H9J4 1324 aaKnown RBP20.26■□□□□ 0.83
RARA-205ENST00000420042 ZPR1O75312 459 aa20.25■□□□□ 0.83
RARA-205ENST00000420042 PPP2R1AP30153 589 aa20.25■□□□□ 0.83
RARA-205ENST00000420042 VSIG10Q8N0Z9 540 aa20.25■□□□□ 0.83
RARA-205ENST00000420042 TJP1Q07157 1748 aa20.24■□□□□ 0.83
RARA-205ENST00000420042 PRKAR2BP31323 418 aa20.24■□□□□ 0.83
RARA-205ENST00000420042 MYH14Q7Z406 1995 aaKnown RBP20.24■□□□□ 0.83
RARA-205ENST00000420042 A0A0G2JLW4 131 aa20.23■□□□□ 0.83
RARA-205ENST00000420042 U2AF1L5P0DN76 240 aaPredicted RBP20.23■□□□□ 0.83
RARA-205ENST00000420042 U2AF1Q01081 240 aaKnown RBP eCLIP20.23■□□□□ 0.83
RARA-205ENST00000420042 FKBP8Q14318 412 aa20.23■□□□□ 0.83
RARA-205ENST00000420042 IL17REQ8NFR9 667 aa20.23■□□□□ 0.83
RARA-205ENST00000420042 C10orf71Q711Q0 1435 aa20.22■□□□□ 0.83
RARA-205ENST00000420042 GIGYF1O75420 1035 aaPredicted RBP20.22■□□□□ 0.83
RARA-205ENST00000420042 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
RARA-205ENST00000420042 RSPH6AQ9H0K4 717 aa20.22■□□□□ 0.83
RARA-205ENST00000420042 PXDNLA1KZ92 1463 aa20.22■□□□□ 0.83
RARA-205ENST00000420042 ADAMTS7Q9UKP4 1686 aa20.22■□□□□ 0.83
RARA-205ENST00000420042 SOS1Q07889 1333 aaPredicted RBP20.22■□□□□ 0.83
RARA-205ENST00000420042 KCPQ6ZWJ8 1503 aa20.22■□□□□ 0.83
RARA-205ENST00000420042 STARD3NLO95772 234 aa20.21■□□□□ 0.83
RARA-205ENST00000420042 C1QTNF8P60827 252 aa20.21■□□□□ 0.83
RARA-205ENST00000420042 USPL1Q5W0Q7 1092 aa20.21■□□□□ 0.83
RARA-205ENST00000420042 BCS1LQ9Y276 419 aa20.21■□□□□ 0.83
RARA-205ENST00000420042 C4AP0C0L4 1744 aa20.21■□□□□ 0.83
RARA-205ENST00000420042 ZNF790Q6PG37 636 aa20.2■□□□□ 0.82
RARA-205ENST00000420042 ZBTB1Q9Y2K1 713 aa20.2■□□□□ 0.82
RARA-205ENST00000420042 DPEP1P16444 411 aa20.19■□□□□ 0.82
RARA-205ENST00000420042 CANXP27824 592 aaKnown RBP20.19■□□□□ 0.82
RARA-205ENST00000420042 FCHSD2O94868 740 aa20.18■□□□□ 0.82
RARA-205ENST00000420042 DDR1Q08345 913 aa20.18■□□□□ 0.82
RARA-205ENST00000420042 ZNF496Q96IT1 587 aaPredicted RBP20.18■□□□□ 0.82
RARA-205ENST00000420042 TEX13AQ9BXU3 409 aaPredicted RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms