RNA–Protein interactions for RNA: ENST00000418882.2

HMGB1P49-201, Transcript of high mobility group box 1 pseudogene 49, humanhuman

BASIC

Gene HMGB1P49, Length 569 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P49-201ENST00000418882 RHOQP17081 205 aa9.08□□□□□ -0.96
HMGB1P49-201ENST00000418882 RASA1P20936 1047 aa9.08□□□□□ -0.96
HMGB1P49-201ENST00000418882 GPC1P35052 558 aa9.08□□□□□ -0.96
HMGB1P49-201ENST00000418882 CCDC102BQ68D86 513 aa9.08□□□□□ -0.96
HMGB1P49-201ENST00000418882 SIX5Q8N196 739 aa9.08□□□□□ -0.96
HMGB1P49-201ENST00000418882 SENP3-EIF4A1A0A087X0R7 540 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 SFI1A8K8P3 1242 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L15C9J2P7 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L10C9JJH3 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L13C9JLJ4 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L12C9JPN9 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L11C9JVI0 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L21D6R901 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L18D6R9N7 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L22D6RA61 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L17D6RBQ6 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L19D6RCP7 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L20D6RJB6 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 USP17L24Q0WX57 530 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 LARGE2Q8N3Y3 721 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 VRTNQ9H8Y1 702 aa9.07□□□□□ -0.96
HMGB1P49-201ENST00000418882 ATP1A2P50993 1020 aa9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 EPHA4P54764 986 aa9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 TLR1Q15399 786 aa9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 ESCO1Q5FWF5 840 aa9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 LYSMD3Q7Z3D4 306 aa9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 ZNF295-AS1Q8N0V1 137 aa9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 SLC4A9Q96Q91 983 aa9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 ARXQ96QS3 562 aa9.06□□□□□ -0.96
HMGB1P49-201ENST00000418882 FAM196BA6NMK8 535 aa9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 VEGFBP49765 207 aa9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 SMTNP53814 917 aa9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 PTSQ03393 145 aa9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 POU4F2Q12837 409 aa9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 SLC27A3Q5K4L6 730 aa9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 LCE2CQ5TA81 110 aa9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 ZMIZ1Q9ULJ6 1067 aa9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 IQSEC3Q9UPP2 1182 aaPredicted RBP9.05□□□□□ -0.96
HMGB1P49-201ENST00000418882 LGR5O75473 907 aa9.04□□□□□ -0.96
HMGB1P49-201ENST00000418882 DPYDQ12882 1025 aa9.04□□□□□ -0.96
HMGB1P49-201ENST00000418882 MTFR1Q15390 333 aa9.04□□□□□ -0.96
HMGB1P49-201ENST00000418882 TNS4Q8IZW8 715 aa9.04□□□□□ -0.96
HMGB1P49-201ENST00000418882 TSEN2Q8NCE0 465 aaKnown RBP9.04□□□□□ -0.96
HMGB1P49-201ENST00000418882 ZNF775Q96BV0 537 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P49-201ENST00000418882 ZSCAN10Q96SZ4 725 aaPredicted RBP9.04□□□□□ -0.96
HMGB1P49-201ENST00000418882 A6NJY4 79 aa9.03□□□□□ -0.96
HMGB1P49-201ENST00000418882 SPATA31C2B4DYI2 1134 aa9.03□□□□□ -0.96
HMGB1P49-201ENST00000418882 ARID3AQ99856 593 aa9.03□□□□□ -0.96
HMGB1P49-201ENST00000418882 SLC35F4A4IF30 521 aa9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 PHKA2P46019 1235 aa9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 FOXK2Q01167 660 aa9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 C4orf17Q53FE4 359 aa9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 TBCELQ5QJ74 424 aa9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 NBPF10Q6P3W6 841 aaKnown RBP9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 LARP1Q6PKG0 1096 aaKnown RBP9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 PPARGC1BQ86YN6 1023 aaKnown RBP9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 ANKMY2Q8IV38 441 aa9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 NBPF15Q8N660 670 aa9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 PBXIP1Q96AQ6 731 aa9.02□□□□□ -0.97
HMGB1P49-201ENST00000418882 GAS2L2Q8NHY3 880 aa9.01□□□□□ -0.97
HMGB1P49-201ENST00000418882 STK32AQ8WU08 396 aa9.01□□□□□ -0.97
HMGB1P49-201ENST00000418882 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
HMGB1P49-201ENST00000418882 CCDC155Q8N6L0 562 aa9□□□□□ -0.97
HMGB1P49-201ENST00000418882 CUEDC1Q9NWM3 386 aaPredicted RBP9□□□□□ -0.97
HMGB1P49-201ENST00000418882 NOVA2Q9UNW9 492 aaKnown RBP9□□□□□ -0.97
HMGB1P49-201ENST00000418882 PPFIA3O75145 1194 aa8.99□□□□□ -0.97
HMGB1P49-201ENST00000418882 SEC13P55735 322 aa8.99□□□□□ -0.97
HMGB1P49-201ENST00000418882 NFX1Q12986 1120 aaKnown RBP8.99□□□□□ -0.97
HMGB1P49-201ENST00000418882 TMEM214Q6NUQ4 689 aaKnown RBP8.99□□□□□ -0.97
HMGB1P49-201ENST00000418882 TAS1R3Q7RTX0 852 aa8.99□□□□□ -0.97
HMGB1P49-201ENST00000418882 ZDHHC1Q8WTX9 485 aa8.99□□□□□ -0.97
HMGB1P49-201ENST00000418882 TSPAN10Q9H1Z9 355 aaPredicted RBP8.99□□□□□ -0.97
HMGB1P49-201ENST00000418882 NXF1Q9UBU9 619 aaKnown RBP8.99□□□□□ -0.97
HMGB1P49-201ENST00000418882 M0R2N6 131 aa8.98□□□□□ -0.97
HMGB1P49-201ENST00000418882 TERTO14746 1132 aaKnown RBP8.98□□□□□ -0.97
HMGB1P49-201ENST00000418882 BACH1O14867 736 aa8.98□□□□□ -0.97
HMGB1P49-201ENST00000418882 ATG7O95352 703 aa8.98□□□□□ -0.97
HMGB1P49-201ENST00000418882 SH3PXD2AQ5TCZ1 1133 aa8.98□□□□□ -0.97
HMGB1P49-201ENST00000418882 SLC9A9Q8IVB4 645 aa8.98□□□□□ -0.97
HMGB1P49-201ENST00000418882 RHBDD1Q8TEB9 315 aa8.98□□□□□ -0.97
HMGB1P49-201ENST00000418882 H3BM21 787 aa8.97□□□□□ -0.97
HMGB1P49-201ENST00000418882 CDK2AP1O14519 115 aa8.97□□□□□ -0.97
HMGB1P49-201ENST00000418882 C21orf2O43822 256 aa8.97□□□□□ -0.97
HMGB1P49-201ENST00000418882 FAM69CQ0P6D2 419 aa8.97□□□□□ -0.97
HMGB1P49-201ENST00000418882 LCE2AQ5TA79 106 aaPredicted RBP8.97□□□□□ -0.97
HMGB1P49-201ENST00000418882 PARP3Q9Y6F1 533 aa8.97□□□□□ -0.97
HMGB1P49-201ENST00000418882 ERBB4Q15303 1308 aa8.97□□□□□ -0.97
HMGB1P49-201ENST00000418882 THBS1P07996 1170 aa8.96□□□□□ -0.98
HMGB1P49-201ENST00000418882 PLA2G4AP47712 749 aa8.96□□□□□ -0.98
HMGB1P49-201ENST00000418882 ELOAQ14241 798 aaKnown RBP8.96□□□□□ -0.98
HMGB1P49-201ENST00000418882 TMEM164Q5U3C3 297 aa8.96□□□□□ -0.98
HMGB1P49-201ENST00000418882 SLAIN2Q9P270 581 aa8.96□□□□□ -0.98
HMGB1P49-201ENST00000418882 WDR44Q5JSH3 913 aa8.95□□□□□ -0.98
HMGB1P49-201ENST00000418882 GNASQ5JWF2 1037 aa8.95□□□□□ -0.98
HMGB1P49-201ENST00000418882 FAM200AQ8TCP9 573 aa8.95□□□□□ -0.98
HMGB1P49-201ENST00000418882 TIMMDC1Q9NPL8 285 aa8.95□□□□□ -0.98
HMGB1P49-201ENST00000418882 ITGA6P23229 1130 aa8.94□□□□□ -0.98
HMGB1P49-201ENST00000418882 KLRG1Q96E93 195 aa8.94□□□□□ -0.98
HMGB1P49-201ENST00000418882 DYRK1BQ9Y463 629 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms