RNA–Protein interactions for RNA: ENST00000418107.2

HLA-DMB-258, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DMB, Length 1,397 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-258ENST00000418107 AMIGO3Q86WK7 504 aa17.4■□□□□ 0.38
HLA-DMB-258ENST00000418107 NUDCQ9Y266 331 aa17.4■□□□□ 0.38
HLA-DMB-258ENST00000418107 TOGARAM1Q9Y4F4 1720 aa17.39■□□□□ 0.38
HLA-DMB-258ENST00000418107 TAF1LQ8IZX4 1826 aa17.39■□□□□ 0.38
HLA-DMB-258ENST00000418107 SMIM5Q71RC9 77 aa17.39■□□□□ 0.37
HLA-DMB-258ENST00000418107 AK7Q96M32 723 aa17.39■□□□□ 0.37
HLA-DMB-258ENST00000418107 SALL2Q9Y467 1007 aaPredicted RBP17.39■□□□□ 0.37
HLA-DMB-258ENST00000418107 C4BP0C0L5 1744 aa17.38■□□□□ 0.37
HLA-DMB-258ENST00000418107 KIF24Q5T7B8 1368 aa17.38■□□□□ 0.37
HLA-DMB-258ENST00000418107 PHF14O94880 888 aa17.38■□□□□ 0.37
HLA-DMB-258ENST00000418107 SMARCC1Q92922 1105 aaPredicted RBP17.38■□□□□ 0.37
HLA-DMB-258ENST00000418107 EMILIN1Q9Y6C2 1016 aa17.38■□□□□ 0.37
HLA-DMB-258ENST00000418107 HMGB2P26583 209 aaKnown RBP17.37■□□□□ 0.37
HLA-DMB-258ENST00000418107 PIGBQ92521 554 aa17.36■□□□□ 0.37
HLA-DMB-258ENST00000418107 WWC3Q9ULE0 1092 aa17.36■□□□□ 0.37
HLA-DMB-258ENST00000418107 ITGB4P16144 1822 aa17.36■□□□□ 0.37
HLA-DMB-258ENST00000418107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.35■□□□□ 0.37
HLA-DMB-258ENST00000418107 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
HLA-DMB-258ENST00000418107 CCDC146Q8IYE0 955 aa17.35■□□□□ 0.37
HLA-DMB-258ENST00000418107 GPBP1L1Q9HC44 474 aaPredicted RBP17.35■□□□□ 0.37
HLA-DMB-258ENST00000418107 POLKQ9UBT6 870 aa17.35■□□□□ 0.37
HLA-DMB-258ENST00000418107 PKD1L3Q7Z443 1732 aa17.35■□□□□ 0.37
HLA-DMB-258ENST00000418107 ADCY9O60503 1353 aa17.34■□□□□ 0.37
HLA-DMB-258ENST00000418107 DIAPH1O60610 1272 aaKnown RBP17.34■□□□□ 0.37
HLA-DMB-258ENST00000418107 U2AF1L5P0DN76 240 aaPredicted RBP17.34■□□□□ 0.37
HLA-DMB-258ENST00000418107 U2AF1Q01081 240 aaKnown RBP eCLIP17.34■□□□□ 0.37
HLA-DMB-258ENST00000418107 ZNF526Q8TF50 670 aaPredicted RBP17.34■□□□□ 0.37
HLA-DMB-258ENST00000418107 IGSF1Q8N6C5 1336 aa17.34■□□□□ 0.37
HLA-DMB-258ENST00000418107 NCAPD2Q15021 1401 aa17.33■□□□□ 0.37
HLA-DMB-258ENST00000418107 LINC00116Q8NCU8 138 aa17.33■□□□□ 0.36
HLA-DMB-258ENST00000418107 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.36
HLA-DMB-258ENST00000418107 LOC102724428A0A0B4J2F2 783 aa17.32■□□□□ 0.36
HLA-DMB-258ENST00000418107 SIK1P57059 783 aa17.32■□□□□ 0.36
HLA-DMB-258ENST00000418107 NKX1-1Q15270 411 aaPredicted RBP17.32■□□□□ 0.36
HLA-DMB-258ENST00000418107 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
HLA-DMB-258ENST00000418107 SSFA2P28290 1259 aa17.31■□□□□ 0.36
HLA-DMB-258ENST00000418107 TMOD3Q9NYL9 352 aa17.3■□□□□ 0.36
HLA-DMB-258ENST00000418107 ITPK1Q13572 414 aa17.29■□□□□ 0.36
HLA-DMB-258ENST00000418107 IFFO2Q5TF58 517 aa17.29■□□□□ 0.36
HLA-DMB-258ENST00000418107 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
HLA-DMB-258ENST00000418107 EYA1Q99502 592 aa17.29■□□□□ 0.36
HLA-DMB-258ENST00000418107 ASAP1Q9ULH1 1129 aa17.29■□□□□ 0.36
HLA-DMB-258ENST00000418107 GNPATO15228 680 aa17.28■□□□□ 0.36
HLA-DMB-258ENST00000418107 PNNQ9H307 717 aaKnown RBP17.28■□□□□ 0.36
HLA-DMB-258ENST00000418107 APAF1O14727 1248 aa17.28■□□□□ 0.36
HLA-DMB-258ENST00000418107 ATP6V1AP38606 617 aa17.28■□□□□ 0.36
HLA-DMB-258ENST00000418107 GTF3C3Q9Y5Q9 886 aa17.28■□□□□ 0.36
HLA-DMB-258ENST00000418107 COL3A1P02461 1466 aaPredicted RBP17.27■□□□□ 0.36
HLA-DMB-258ENST00000418107 PHKG2P15735 406 aa17.27■□□□□ 0.35
HLA-DMB-258ENST00000418107 HSPA6P17066 643 aa17.27■□□□□ 0.35
HLA-DMB-258ENST00000418107 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.35
HLA-DMB-258ENST00000418107 NEFMP07197 916 aa17.26■□□□□ 0.35
HLA-DMB-258ENST00000418107 IFNL2Q8IZJ0 200 aa17.26■□□□□ 0.35
HLA-DMB-258ENST00000418107 MMP10P09238 476 aa17.25■□□□□ 0.35
HLA-DMB-258ENST00000418107 NGEFQ8N5V2 710 aa17.25■□□□□ 0.35
HLA-DMB-258ENST00000418107 ATG3Q9NT62 314 aa17.25■□□□□ 0.35
HLA-DMB-258ENST00000418107 MAPK8IP3Q9UPT6 1336 aa17.24■□□□□ 0.35
HLA-DMB-258ENST00000418107 NEUROD2Q15784 382 aa17.23■□□□□ 0.35
HLA-DMB-258ENST00000418107 PXDNLA1KZ92 1463 aa17.23■□□□□ 0.35
HLA-DMB-258ENST00000418107 KIF3CO14782 793 aa17.22■□□□□ 0.35
HLA-DMB-258ENST00000418107 NEFLP07196 543 aa17.22■□□□□ 0.35
HLA-DMB-258ENST00000418107 IL13P35225 146 aa17.22■□□□□ 0.35
HLA-DMB-258ENST00000418107 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
HLA-DMB-258ENST00000418107 KDRP35968 1356 aa17.21■□□□□ 0.35
HLA-DMB-258ENST00000418107 CICQ96RK0 1608 aaPredicted RBP17.21■□□□□ 0.35
HLA-DMB-258ENST00000418107 FCHSD2O94868 740 aa17.21■□□□□ 0.35
HLA-DMB-258ENST00000418107 RRP7AQ9Y3A4 280 aaKnown RBP17.21■□□□□ 0.35
HLA-DMB-258ENST00000418107 TRAPPC3LQ5T215 181 aa17.2■□□□□ 0.34
HLA-DMB-258ENST00000418107 SLC4A9Q96Q91 983 aa17.2■□□□□ 0.34
HLA-DMB-258ENST00000418107 RTCBQ9Y3I0 505 aaKnown RBP17.2■□□□□ 0.34
HLA-DMB-258ENST00000418107 A0A0G2JLW4 131 aa17.19■□□□□ 0.34
HLA-DMB-258ENST00000418107 HMOX1P09601 288 aa17.19■□□□□ 0.34
HLA-DMB-258ENST00000418107 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
HLA-DMB-258ENST00000418107 BCS1LQ9Y276 419 aa17.19■□□□□ 0.34
HLA-DMB-258ENST00000418107 KIAA1551Q9HCM1 1747 aa17.19■□□□□ 0.34
HLA-DMB-258ENST00000418107 GOLGA2Q08379 1002 aa17.18■□□□□ 0.34
HLA-DMB-258ENST00000418107 C10orf71Q711Q0 1435 aa17.18■□□□□ 0.34
HLA-DMB-258ENST00000418107 KIF13BQ9NQT8 1826 aa17.18■□□□□ 0.34
HLA-DMB-258ENST00000418107 PRKAR2BP31323 418 aa17.17■□□□□ 0.34
HLA-DMB-258ENST00000418107 TGFB2P61812 414 aa17.17■□□□□ 0.34
HLA-DMB-258ENST00000418107 NLGN1Q8N2Q7 840 aa17.17■□□□□ 0.34
HLA-DMB-258ENST00000418107 ARHGEF1Q92888 912 aaKnown RBP17.17■□□□□ 0.34
HLA-DMB-258ENST00000418107 CDCA7LQ96GN5 454 aa17.17■□□□□ 0.34
HLA-DMB-258ENST00000418107 SUPT16HQ9Y5B9 1047 aaKnown RBP17.17■□□□□ 0.34
HLA-DMB-258ENST00000418107 N4BP2Q86UW6 1770 aaPredicted RBP17.17■□□□□ 0.34
HLA-DMB-258ENST00000418107 ERVV-2B6SEH9 535 aa17.16■□□□□ 0.34
HLA-DMB-258ENST00000418107 GYS1P13807 737 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 DPEP1P16444 411 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 RC3H1Q5TC82 1133 aaKnown RBP17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 ARHGAP27Q6ZUM4 889 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 PLEKHF1Q96S99 279 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 CCDC87Q9NVE4 849 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 PLEKHG2Q9H7P9 1386 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 CNTNAP4Q9C0A0 1308 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 KDM6AO15550 1401 aaPredicted RBP17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 ADRA2BP18089 450 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 RFC4P35249 363 aa17.15■□□□□ 0.34
HLA-DMB-258ENST00000418107 C4AP0C0L4 1744 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms