RNA–Protein interactions for RNA: ENST00000417724.1

HLA-DPA1-241, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-241ENST00000417724 EYA1Q99502 592 aa10.91□□□□□ -0.66
HLA-DPA1-241ENST00000417724 RTCBQ9Y3I0 505 aaKnown RBP10.91□□□□□ -0.66
HLA-DPA1-241ENST00000417724 NCAPD2Q15021 1401 aa10.91□□□□□ -0.66
HLA-DPA1-241ENST00000417724 TOMM70O94826 608 aa10.9□□□□□ -0.66
HLA-DPA1-241ENST00000417724 PHKG2P15735 406 aa10.9□□□□□ -0.66
HLA-DPA1-241ENST00000417724 ATG3Q9NT62 314 aa10.9□□□□□ -0.66
HLA-DPA1-241ENST00000417724 BCS1LQ9Y276 419 aa10.9□□□□□ -0.66
HLA-DPA1-241ENST00000417724 A0A0G2JLW4 131 aa10.89□□□□□ -0.67
HLA-DPA1-241ENST00000417724 RC3H1Q5TC82 1133 aaKnown RBP10.89□□□□□ -0.67
HLA-DPA1-241ENST00000417724 ARHGAP27Q6ZUM4 889 aa10.89□□□□□ -0.67
HLA-DPA1-241ENST00000417724 KIF13BQ9NQT8 1826 aa10.88□□□□□ -0.67
HLA-DPA1-241ENST00000417724 ERVV-2B6SEH9 535 aa10.88□□□□□ -0.67
HLA-DPA1-241ENST00000417724 ADRA2BP18089 450 aa10.88□□□□□ -0.67
HLA-DPA1-241ENST00000417724 RFC4P35249 363 aa10.88□□□□□ -0.67
HLA-DPA1-241ENST00000417724 RBM42Q9BTD8 480 aaKnown RBP10.88□□□□□ -0.67
HLA-DPA1-241ENST00000417724 CCDC87Q9NVE4 849 aa10.88□□□□□ -0.67
HLA-DPA1-241ENST00000417724 POLKQ9UBT6 870 aa10.88□□□□□ -0.67
HLA-DPA1-241ENST00000417724 N4BP2Q86UW6 1770 aaPredicted RBP10.88□□□□□ -0.67
HLA-DPA1-241ENST00000417724 CICQ96RK0 1608 aaPredicted RBP10.87□□□□□ -0.67
HLA-DPA1-241ENST00000417724 PXDNLA1KZ92 1463 aa10.87□□□□□ -0.67
HLA-DPA1-241ENST00000417724 FCHSD2O94868 740 aa10.87□□□□□ -0.67
HLA-DPA1-241ENST00000417724 HSP90AB1P08238 724 aaKnown RBP10.87□□□□□ -0.67
HLA-DPA1-241ENST00000417724 ARHGEF1Q92888 912 aaKnown RBP10.87□□□□□ -0.67
HLA-DPA1-241ENST00000417724 PARP3Q9Y6F1 533 aa10.87□□□□□ -0.67
HLA-DPA1-241ENST00000417724 ANKRD26Q9UPS8 1709 aa10.87□□□□□ -0.67
HLA-DPA1-241ENST00000417724 RPS6KA4O75676 772 aa10.86□□□□□ -0.67
HLA-DPA1-241ENST00000417724 DPEP1P16444 411 aa10.86□□□□□ -0.67
HLA-DPA1-241ENST00000417724 DNAJC5GQ8N7S2 189 aa10.86□□□□□ -0.67
HLA-DPA1-241ENST00000417724 DCAF5Q96JK2 942 aa10.86□□□□□ -0.67
HLA-DPA1-241ENST00000417724 PLEKHG2Q9H7P9 1386 aa10.86□□□□□ -0.67
HLA-DPA1-241ENST00000417724 GYS1P13807 737 aa10.85□□□□□ -0.67
HLA-DPA1-241ENST00000417724 CABP4P57796 275 aa10.85□□□□□ -0.67
HLA-DPA1-241ENST00000417724 EIF4A2Q14240 407 aaKnown RBP10.85□□□□□ -0.67
HLA-DPA1-241ENST00000417724 PLEKHO1Q53GL0 409 aaPredicted RBP10.85□□□□□ -0.67
HLA-DPA1-241ENST00000417724 C16orf71Q8IYS4 520 aaPredicted RBP10.85□□□□□ -0.67
HLA-DPA1-241ENST00000417724 SLC4A9Q96Q91 983 aa10.85□□□□□ -0.67
HLA-DPA1-241ENST00000417724 NMRK2Q9NPI5 230 aa10.85□□□□□ -0.67
HLA-DPA1-241ENST00000417724 ZNF831Q5JPB2 1677 aa10.85□□□□□ -0.67
HLA-DPA1-241ENST00000417724 CNTNAP4Q9C0A0 1308 aa10.84□□□□□ -0.67
HLA-DPA1-241ENST00000417724 C10orf71Q711Q0 1435 aa10.84□□□□□ -0.67
HLA-DPA1-241ENST00000417724 KIAA1551Q9HCM1 1747 aa10.84□□□□□ -0.67
HLA-DPA1-241ENST00000417724 TNNT2P45379 298 aaPredicted RBP10.84□□□□□ -0.67
HLA-DPA1-241ENST00000417724 C9orf131Q5VYM1 1079 aa10.84□□□□□ -0.67
HLA-DPA1-241ENST00000417724 RBM46Q8TBY0 533 aaKnown RBP10.84□□□□□ -0.67
HLA-DPA1-241ENST00000417724 PIM2Q9P1W9 311 aa10.84□□□□□ -0.67
HLA-DPA1-241ENST00000417724 KDRP35968 1356 aa10.84□□□□□ -0.67
HLA-DPA1-241ENST00000417724 KCNA3P22001 575 aa10.83□□□□□ -0.68
HLA-DPA1-241ENST00000417724 AMOTQ4VCS5 1084 aa10.83□□□□□ -0.68
HLA-DPA1-241ENST00000417724 C4AP0C0L4 1744 aa10.83□□□□□ -0.68
HLA-DPA1-241ENST00000417724 MYH14Q7Z406 1995 aaKnown RBP10.83□□□□□ -0.68
HLA-DPA1-241ENST00000417724 BRCA1P38398 1863 aaKnown RBP10.83□□□□□ -0.68
HLA-DPA1-241ENST00000417724 KDM2BQ8NHM5 1336 aa10.83□□□□□ -0.68
HLA-DPA1-241ENST00000417724 ARFGEF1Q9Y6D6 1849 aa10.82□□□□□ -0.68
HLA-DPA1-241ENST00000417724 PTCD1O75127 700 aaKnown RBP10.82□□□□□ -0.68
HLA-DPA1-241ENST00000417724 MTHFSP49914 203 aa10.82□□□□□ -0.68
HLA-DPA1-241ENST00000417724 FSTL1Q12841 308 aa10.82□□□□□ -0.68
HLA-DPA1-241ENST00000417724 DALRD3Q5D0E6 543 aaKnown RBP10.82□□□□□ -0.68
HLA-DPA1-241ENST00000417724 ZNF530Q6P9A1 599 aaPredicted RBP10.82□□□□□ -0.68
HLA-DPA1-241ENST00000417724 COL5A3P25940 1745 aaPredicted RBP10.81□□□□□ -0.68
HLA-DPA1-241ENST00000417724 C1orf141Q5JVX7 400 aa10.81□□□□□ -0.68
HLA-DPA1-241ENST00000417724 CRKLP46109 303 aaKnown RBP10.8□□□□□ -0.68
HLA-DPA1-241ENST00000417724 NFATC2IPQ8NCF5 419 aa10.8□□□□□ -0.68
HLA-DPA1-241ENST00000417724 KLRG1Q96E93 195 aa10.8□□□□□ -0.68
HLA-DPA1-241ENST00000417724 POLR3GLQ9BT43 218 aa10.8□□□□□ -0.68
HLA-DPA1-241ENST00000417724 RNF181Q9P0P0 153 aa10.8□□□□□ -0.68
HLA-DPA1-241ENST00000417724 WDR90Q96KV7 1748 aa10.79□□□□□ -0.68
HLA-DPA1-241ENST00000417724 FKBP8Q14318 412 aa10.79□□□□□ -0.68
HLA-DPA1-241ENST00000417724 RRAGCQ9HB90 399 aa10.79□□□□□ -0.68
HLA-DPA1-241ENST00000417724 SRP68Q9UHB9 627 aaKnown RBP10.79□□□□□ -0.68
HLA-DPA1-241ENST00000417724 TIMELESSQ9UNS1 1208 aa10.79□□□□□ -0.68
HLA-DPA1-241ENST00000417724 USP42Q9H9J4 1324 aaKnown RBP10.79□□□□□ -0.68
HLA-DPA1-241ENST00000417724 SBF1O95248 1867 aa10.78□□□□□ -0.68
HLA-DPA1-241ENST00000417724 KDM6AO15550 1401 aaPredicted RBP10.78□□□□□ -0.68
HLA-DPA1-241ENST00000417724 ZPR1O75312 459 aa10.78□□□□□ -0.68
HLA-DPA1-241ENST00000417724 DDR1Q08345 913 aa10.78□□□□□ -0.68
HLA-DPA1-241ENST00000417724 JMYQ8N9B5 988 aa10.78□□□□□ -0.68
HLA-DPA1-241ENST00000417724 TM4SF1P30408 202 aa10.77□□□□□ -0.69
HLA-DPA1-241ENST00000417724 CHRNA5P30532 468 aa10.77□□□□□ -0.69
HLA-DPA1-241ENST00000417724 HTRA3P83110 453 aa10.77□□□□□ -0.69
HLA-DPA1-241ENST00000417724 INTS5Q6P9B9 1019 aaKnown RBP10.77□□□□□ -0.69
HLA-DPA1-241ENST00000417724 SMC1BQ8NDV3 1235 aa10.77□□□□□ -0.69
HLA-DPA1-241ENST00000417724 KCPQ6ZWJ8 1503 aa10.77□□□□□ -0.69
HLA-DPA1-241ENST00000417724 POLRMTO00411 1230 aaKnown RBP10.76□□□□□ -0.69
HLA-DPA1-241ENST00000417724 MORC1Q86VD1 984 aa10.76□□□□□ -0.69
HLA-DPA1-241ENST00000417724 ZC3H4Q9UPT8 1303 aaKnown RBP10.76□□□□□ -0.69
HLA-DPA1-241ENST00000417724 VEGFAP15692 232 aaPredicted RBP10.75□□□□□ -0.69
HLA-DPA1-241ENST00000417724 COL13A1Q5TAT6 717 aaPredicted RBP10.75□□□□□ -0.69
HLA-DPA1-241ENST00000417724 SULT6B1Q6IMI4 303 aa10.75□□□□□ -0.69
HLA-DPA1-241ENST00000417724 AEBP1Q8IUX7 1158 aa10.75□□□□□ -0.69
HLA-DPA1-241ENST00000417724 PANK3Q9H999 370 aa10.75□□□□□ -0.69
HLA-DPA1-241ENST00000417724 TNRC6CQ9HCJ0 1690 aaKnown RBP10.75□□□□□ -0.69
HLA-DPA1-241ENST00000417724 LMNB1P20700 586 aa10.74□□□□□ -0.69
HLA-DPA1-241ENST00000417724 USPL1Q5W0Q7 1092 aa10.74□□□□□ -0.69
HLA-DPA1-241ENST00000417724 DNAJC10Q8IXB1 793 aa10.74□□□□□ -0.69
HLA-DPA1-241ENST00000417724 SCN11AQ9UI33 1791 aa10.74□□□□□ -0.69
HLA-DPA1-241ENST00000417724 GLTPD2A6NH11 291 aa10.73□□□□□ -0.69
HLA-DPA1-241ENST00000417724 NFIXQ14938 502 aa10.73□□□□□ -0.69
HLA-DPA1-241ENST00000417724 AKAP4Q5JQC9 854 aa10.73□□□□□ -0.69
HLA-DPA1-241ENST00000417724 TTLL6Q8N841 843 aa10.73□□□□□ -0.69
HLA-DPA1-241ENST00000417724 SLC52A2Q9HAB3 445 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms