RNA–Protein interactions for RNA: ENST00000417004.5

PTPN20-209, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 5

Gene PTPN20, Length 567 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-209ENST00000417004 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.02■■□□□ 1.76
PTPN20-209ENST00000417004 SSFA2P28290 1259 aa26.02■■□□□ 1.76
PTPN20-209ENST00000417004 AMIGO3Q86WK7 504 aa26.02■■□□□ 1.76
PTPN20-209ENST00000417004 ITPK1Q13572 414 aa26.01■■□□□ 1.75
PTPN20-209ENST00000417004 GOLGB1Q14789 3259 aaKnown RBP26.01■■□□□ 1.75
PTPN20-209ENST00000417004 SULT6B1Q6IMI4 303 aa26.01■■□□□ 1.75
PTPN20-209ENST00000417004 C1orf141Q5JVX7 400 aa26■■□□□ 1.75
PTPN20-209ENST00000417004 CHD4Q14839 1912 aa26■■□□□ 1.75
PTPN20-209ENST00000417004 KDM6AO15550 1401 aaPredicted RBP25.99■■□□□ 1.75
PTPN20-209ENST00000417004 GNPATO15228 680 aa25.99■■□□□ 1.75
PTPN20-209ENST00000417004 IL13P35225 146 aa25.99■■□□□ 1.75
PTPN20-209ENST00000417004 SMIM5Q71RC9 77 aa25.99■■□□□ 1.75
PTPN20-209ENST00000417004 KDRP35968 1356 aa25.98■■□□□ 1.75
PTPN20-209ENST00000417004 CABP4P57796 275 aa25.98■■□□□ 1.75
PTPN20-209ENST00000417004 ZNF784Q8NCA9 323 aaPredicted RBP25.98■■□□□ 1.75
PTPN20-209ENST00000417004 MTHFSP49914 203 aa25.97■■□□□ 1.75
PTPN20-209ENST00000417004 RBM42Q9BTD8 480 aaKnown RBP25.97■■□□□ 1.75
PTPN20-209ENST00000417004 CD2APQ9Y5K6 639 aa25.96■■□□□ 1.75
PTPN20-209ENST00000417004 PER1O15534 1290 aaPredicted RBP25.94■■□□□ 1.74
PTPN20-209ENST00000417004 CC2D1BQ5T0F9 858 aaKnown RBP25.94■■□□□ 1.74
PTPN20-209ENST00000417004 ZNF831Q5JPB2 1677 aa25.93■■□□□ 1.74
PTPN20-209ENST00000417004 SLC4A9Q96Q91 983 aa25.92■■□□□ 1.74
PTPN20-209ENST00000417004 GRIN3BO60391 1043 aa25.91■■□□□ 1.74
PTPN20-209ENST00000417004 YBX3P16989 372 aaKnown RBP eCLIP25.91■■□□□ 1.74
PTPN20-209ENST00000417004 RTCBQ9Y3I0 505 aaKnown RBP25.91■■□□□ 1.74
PTPN20-209ENST00000417004 NFATC2IPQ8NCF5 419 aa25.89■■□□□ 1.74
PTPN20-209ENST00000417004 AKAP4Q5JQC9 854 aa25.88■■□□□ 1.73
PTPN20-209ENST00000417004 TRAPPC3LQ5T215 181 aa25.88■■□□□ 1.73
PTPN20-209ENST00000417004 COL5A3P25940 1745 aaPredicted RBP25.88■■□□□ 1.73
PTPN20-209ENST00000417004 CNTNAP4Q9C0A0 1308 aa25.88■■□□□ 1.73
PTPN20-209ENST00000417004 PTCD1O75127 700 aaKnown RBP25.87■■□□□ 1.73
PTPN20-209ENST00000417004 HMOX1P09601 288 aa25.87■■□□□ 1.73
PTPN20-209ENST00000417004 RC3H1Q5TC82 1133 aaKnown RBP25.87■■□□□ 1.73
PTPN20-209ENST00000417004 DIAPH1O60610 1272 aaKnown RBP25.86■■□□□ 1.73
PTPN20-209ENST00000417004 NPC1L1Q9UHC9 1359 aa25.85■■□□□ 1.73
PTPN20-209ENST00000417004 ADRA2BP18089 450 aa25.85■■□□□ 1.73
PTPN20-209ENST00000417004 SCN11AQ9UI33 1791 aa25.84■■□□□ 1.73
PTPN20-209ENST00000417004 CNGB1Q14028 1251 aaPredicted RBP25.84■■□□□ 1.73
PTPN20-209ENST00000417004 MMP10P09238 476 aa25.83■■□□□ 1.73
PTPN20-209ENST00000417004 RPS6KA4O75676 772 aa25.82■■□□□ 1.72
PTPN20-209ENST00000417004 ARHGEF1Q92888 912 aaKnown RBP25.82■■□□□ 1.72
PTPN20-209ENST00000417004 RFC4P35249 363 aa25.81■■□□□ 1.72
PTPN20-209ENST00000417004 NLGN1Q8N2Q7 840 aa25.81■■□□□ 1.72
PTPN20-209ENST00000417004 SLC52A2Q9HAB3 445 aa25.81■■□□□ 1.72
PTPN20-209ENST00000417004 CRKLP46109 303 aaKnown RBP25.79■■□□□ 1.72
PTPN20-209ENST00000417004 LGR6Q9HBX8 967 aa25.79■■□□□ 1.72
PTPN20-209ENST00000417004 MRC1P22897 1456 aa25.79■■□□□ 1.72
PTPN20-209ENST00000417004 TJP1Q07157 1748 aa25.78■■□□□ 1.72
PTPN20-209ENST00000417004 RNMTO43148 476 aaKnown RBP25.78■■□□□ 1.72
PTPN20-209ENST00000417004 MTHFSDQ2M296 383 aaKnown RBP25.78■■□□□ 1.72
PTPN20-209ENST00000417004 COL3A1P02461 1466 aaPredicted RBP25.78■■□□□ 1.72
PTPN20-209ENST00000417004 CICQ96RK0 1608 aaPredicted RBP25.77■■□□□ 1.72
PTPN20-209ENST00000417004 GYS1P13807 737 aa25.77■■□□□ 1.72
PTPN20-209ENST00000417004 WWC3Q9ULE0 1092 aa25.77■■□□□ 1.72
PTPN20-209ENST00000417004 MYH14Q7Z406 1995 aaKnown RBP25.76■■□□□ 1.72
PTPN20-209ENST00000417004 U2SURPO15042 1029 aaKnown RBP25.76■■□□□ 1.71
PTPN20-209ENST00000417004 C4AP0C0L4 1744 aa25.76■■□□□ 1.71
PTPN20-209ENST00000417004 CCDC87Q9NVE4 849 aa25.73■■□□□ 1.71
PTPN20-209ENST00000417004 PARP3Q9Y6F1 533 aa25.73■■□□□ 1.71
PTPN20-209ENST00000417004 ADAMTS7Q9UKP4 1686 aa25.72■■□□□ 1.71
PTPN20-209ENST00000417004 SLC39A6Q13433 755 aa25.72■■□□□ 1.71
PTPN20-209ENST00000417004 DNAJC10Q8IXB1 793 aa25.72■■□□□ 1.71
PTPN20-209ENST00000417004 VIRMAQ69YN4 1812 aaKnown RBP25.72■■□□□ 1.71
PTPN20-209ENST00000417004 PXDNLA1KZ92 1463 aa25.72■■□□□ 1.71
PTPN20-209ENST00000417004 C10orf71Q711Q0 1435 aa25.71■■□□□ 1.71
PTPN20-209ENST00000417004 GIGYF1O75420 1035 aaPredicted RBP25.71■■□□□ 1.71
PTPN20-209ENST00000417004 TGFB2P61812 414 aa25.71■■□□□ 1.71
PTPN20-209ENST00000417004 INTS5Q6P9B9 1019 aaKnown RBP25.71■■□□□ 1.71
PTPN20-209ENST00000417004 KIF13BQ9NQT8 1826 aa25.71■■□□□ 1.71
PTPN20-209ENST00000417004 USP42Q9H9J4 1324 aaKnown RBP25.7■■□□□ 1.71
PTPN20-209ENST00000417004 C1QTNF8P60827 252 aa25.7■■□□□ 1.7
PTPN20-209ENST00000417004 SRP68Q9UHB9 627 aaKnown RBP25.7■■□□□ 1.7
PTPN20-209ENST00000417004 KCPQ6ZWJ8 1503 aa25.69■■□□□ 1.7
PTPN20-209ENST00000417004 CFAP53Q96M91 514 aa25.69■■□□□ 1.7
PTPN20-209ENST00000417004 GAS2L2Q8NHY3 880 aa25.68■■□□□ 1.7
PTPN20-209ENST00000417004 ATP10DQ9P241 1426 aa25.68■■□□□ 1.7
PTPN20-209ENST00000417004 KIAA1551Q9HCM1 1747 aa25.66■■□□□ 1.7
PTPN20-209ENST00000417004 CYP19A1P11511 503 aaPredicted RBP25.66■■□□□ 1.7
PTPN20-209ENST00000417004 FKBP8Q14318 412 aa25.66■■□□□ 1.7
PTPN20-209ENST00000417004 SOS1Q07889 1333 aaPredicted RBP25.65■■□□□ 1.7
PTPN20-209ENST00000417004 N4BP2Q86UW6 1770 aaPredicted RBP25.65■■□□□ 1.7
PTPN20-209ENST00000417004 A0A0G2JLW4 131 aa25.65■■□□□ 1.7
PTPN20-209ENST00000417004 GNAT3A8MTJ3 354 aa25.65■■□□□ 1.7
PTPN20-209ENST00000417004 ZPR1O75312 459 aa25.65■■□□□ 1.7
PTPN20-209ENST00000417004 TTC5Q8N0Z6 440 aa25.65■■□□□ 1.7
PTPN20-209ENST00000417004 VSIG10Q8N0Z9 540 aa25.65■■□□□ 1.7
PTPN20-209ENST00000417004 TEFQ10587 303 aa25.64■■□□□ 1.7
PTPN20-209ENST00000417004 ADCY9O60503 1353 aa25.64■■□□□ 1.69
PTPN20-209ENST00000417004 BCS1LQ9Y276 419 aa25.63■■□□□ 1.69
PTPN20-209ENST00000417004 UBR2Q8IWV8 1755 aa25.62■■□□□ 1.69
PTPN20-209ENST00000417004 DPEP1P16444 411 aa25.62■■□□□ 1.69
PTPN20-209ENST00000417004 NUDCQ9Y266 331 aa25.62■■□□□ 1.69
PTPN20-209ENST00000417004 COL15A1P39059 1388 aa25.61■■□□□ 1.69
PTPN20-209ENST00000417004 SENP3-EIF4A1A0A087X0R7 540 aa25.61■■□□□ 1.69
PTPN20-209ENST00000417004 PRKAR2BP31323 418 aa25.61■■□□□ 1.69
PTPN20-209ENST00000417004 DDR1Q08345 913 aa25.61■■□□□ 1.69
PTPN20-209ENST00000417004 USPL1Q5W0Q7 1092 aa25.61■■□□□ 1.69
PTPN20-209ENST00000417004 IL17REQ8NFR9 667 aa25.61■■□□□ 1.69
PTPN20-209ENST00000417004 ZBTB1Q9Y2K1 713 aa25.61■■□□□ 1.69
PTPN20-209ENST00000417004 PPP2R1AP30153 589 aa25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms