RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 C1orf115Q9H7X2 142 aa11.03□□□□□ -0.64
GTF3AP1-201ENST00000416942 EIF4G3O43432 1585 aaKnown RBP11.03□□□□□ -0.64
GTF3AP1-201ENST00000416942 STAU1O95793 577 aaKnown RBP11.02□□□□□ -0.65
GTF3AP1-201ENST00000416942 TRIM50Q86XT4 487 aa11.02□□□□□ -0.65
GTF3AP1-201ENST00000416942 CCDC97Q96F63 343 aaPredicted RBP11.02□□□□□ -0.65
GTF3AP1-201ENST00000416942 SOBPA7XYQ1 873 aa11.01□□□□□ -0.65
GTF3AP1-201ENST00000416942 IL2RAP01589 272 aa11.01□□□□□ -0.65
GTF3AP1-201ENST00000416942 FOXD4L5Q5VV16 416 aaPredicted RBP11.01□□□□□ -0.65
GTF3AP1-201ENST00000416942 NLRP3Q96P20 1036 aa11.01□□□□□ -0.65
GTF3AP1-201ENST00000416942 ETNK1Q9HBU6 452 aa11.01□□□□□ -0.65
GTF3AP1-201ENST00000416942 DNMT3LQ9UJW3 386 aa11.01□□□□□ -0.65
GTF3AP1-201ENST00000416942 SERPINA10Q9UK55 444 aa11.01□□□□□ -0.65
GTF3AP1-201ENST00000416942 FIGNL2A6NMB9 653 aa11□□□□□ -0.65
GTF3AP1-201ENST00000416942 MAN1A2O60476 641 aa11□□□□□ -0.65
GTF3AP1-201ENST00000416942 SCNN1DP51172 638 aa11□□□□□ -0.65
GTF3AP1-201ENST00000416942 ESCO1Q5FWF5 840 aa11□□□□□ -0.65
GTF3AP1-201ENST00000416942 RNF217Q8TC41 542 aa11□□□□□ -0.65
GTF3AP1-201ENST00000416942 CNKSR1Q969H4 720 aa11□□□□□ -0.65
GTF3AP1-201ENST00000416942 ESYT1Q9BSJ8 1104 aa11□□□□□ -0.65
GTF3AP1-201ENST00000416942 RNF144AP50876 292 aaPredicted RBP10.99□□□□□ -0.65
GTF3AP1-201ENST00000416942 ATP1A2P50993 1020 aa10.99□□□□□ -0.65
GTF3AP1-201ENST00000416942 GDF10P55107 478 aa10.99□□□□□ -0.65
GTF3AP1-201ENST00000416942 CLDN10P78369 228 aa10.99□□□□□ -0.65
GTF3AP1-201ENST00000416942 PSME1Q06323 249 aa10.99□□□□□ -0.65
GTF3AP1-201ENST00000416942 CCDC82Q8N4S0 544 aa10.99□□□□□ -0.65
GTF3AP1-201ENST00000416942 XAGE2Q96GT9 111 aa10.99□□□□□ -0.65
GTF3AP1-201ENST00000416942 SUPT5HO00267 1087 aaKnown RBP10.98□□□□□ -0.65
GTF3AP1-201ENST00000416942 RFX1P22670 979 aa10.98□□□□□ -0.65
GTF3AP1-201ENST00000416942 GPC1P35052 558 aa10.98□□□□□ -0.65
GTF3AP1-201ENST00000416942 KANK4Q5T7N3 995 aaPredicted RBP10.98□□□□□ -0.65
GTF3AP1-201ENST00000416942 OGFOD1Q8N543 542 aa10.98□□□□□ -0.65
GTF3AP1-201ENST00000416942 DNAAF2Q9NVR5 837 aaKnown RBP10.98□□□□□ -0.65
GTF3AP1-201ENST00000416942 HRH3Q9Y5N1 445 aa10.98□□□□□ -0.65
GTF3AP1-201ENST00000416942 TMEM229AB2RXF0 380 aa10.97□□□□□ -0.65
GTF3AP1-201ENST00000416942 INHAP05111 366 aa10.97□□□□□ -0.65
GTF3AP1-201ENST00000416942 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.97□□□□□ -0.65
GTF3AP1-201ENST00000416942 VRTNQ9H8Y1 702 aa10.97□□□□□ -0.65
GTF3AP1-201ENST00000416942 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
GTF3AP1-201ENST00000416942 TOPBP1Q92547 1522 aa10.97□□□□□ -0.65
GTF3AP1-201ENST00000416942 WASLO00401 505 aaPredicted RBP10.96□□□□□ -0.65
GTF3AP1-201ENST00000416942 ZBTB7BO15156 539 aaPredicted RBP10.96□□□□□ -0.65
GTF3AP1-201ENST00000416942 RASA1P20936 1047 aa10.96□□□□□ -0.65
GTF3AP1-201ENST00000416942 LARGE2Q8N3Y3 721 aa10.96□□□□□ -0.65
GTF3AP1-201ENST00000416942 CENPCQ03188 943 aa10.95□□□□□ -0.66
GTF3AP1-201ENST00000416942 SLC27A3Q5K4L6 730 aa10.95□□□□□ -0.66
GTF3AP1-201ENST00000416942 CCDC102BQ68D86 513 aa10.95□□□□□ -0.66
GTF3AP1-201ENST00000416942 TPCN2Q8NHX9 752 aa10.95□□□□□ -0.66
GTF3AP1-201ENST00000416942 CHMP7Q8WUX9 453 aaPredicted RBP10.95□□□□□ -0.66
GTF3AP1-201ENST00000416942 LYSMD3Q7Z3D4 306 aa10.94□□□□□ -0.66
GTF3AP1-201ENST00000416942 ZNF594Q96JF6 807 aaPredicted RBP10.94□□□□□ -0.66
GTF3AP1-201ENST00000416942 GRIP2Q9C0E4 1043 aa10.94□□□□□ -0.66
GTF3AP1-201ENST00000416942 CRTC2Q53ET0 693 aaPredicted RBP10.93□□□□□ -0.66
GTF3AP1-201ENST00000416942 LARP1Q6PKG0 1096 aaKnown RBP10.93□□□□□ -0.66
GTF3AP1-201ENST00000416942 PRICKLE2Q7Z3G6 844 aa10.93□□□□□ -0.66
GTF3AP1-201ENST00000416942 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.93□□□□□ -0.66
GTF3AP1-201ENST00000416942 FHDC1Q9C0D6 1143 aaPredicted RBP10.93□□□□□ -0.66
GTF3AP1-201ENST00000416942 SERTAD1Q9UHV2 236 aa10.93□□□□□ -0.66
GTF3AP1-201ENST00000416942 FAM196BA6NMK8 535 aa10.92□□□□□ -0.66
GTF3AP1-201ENST00000416942 TLR1Q15399 786 aa10.92□□□□□ -0.66
GTF3AP1-201ENST00000416942 CDCA8Q53HL2 280 aa10.92□□□□□ -0.66
GTF3AP1-201ENST00000416942 SIX5Q8N196 739 aa10.92□□□□□ -0.66
GTF3AP1-201ENST00000416942 ZSCAN10Q96SZ4 725 aaPredicted RBP10.92□□□□□ -0.66
GTF3AP1-201ENST00000416942 ZNF358Q9NW07 568 aa10.92□□□□□ -0.66
GTF3AP1-201ENST00000416942 GAPVD1Q14C86 1478 aa10.92□□□□□ -0.66
GTF3AP1-201ENST00000416942 TDRD9Q8NDG6 1382 aaKnown RBP10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 CLASP1Q7Z460 1538 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L15C9J2P7 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L10C9JJH3 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L13C9JLJ4 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L12C9JPN9 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L11C9JVI0 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L21D6R901 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L18D6R9N7 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L22D6RA61 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L17D6RBQ6 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L19D6RCP7 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L20D6RJB6 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 DKK1O94907 266 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 USP17L24Q0WX57 530 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 PTK7Q13308 1070 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 SLC4A9Q96Q91 983 aa10.91□□□□□ -0.66
GTF3AP1-201ENST00000416942 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.9□□□□□ -0.66
GTF3AP1-201ENST00000416942 BACH1O14867 736 aa10.9□□□□□ -0.66
GTF3AP1-201ENST00000416942 SMTNP53814 917 aa10.9□□□□□ -0.66
GTF3AP1-201ENST00000416942 SRPK2P78362 688 aaKnown RBP10.9□□□□□ -0.66
GTF3AP1-201ENST00000416942 RBM19Q9Y4C8 960 aaKnown RBP10.9□□□□□ -0.66
GTF3AP1-201ENST00000416942 RHOQP17081 205 aa10.89□□□□□ -0.67
GTF3AP1-201ENST00000416942 PTSQ03393 145 aa10.89□□□□□ -0.67
GTF3AP1-201ENST00000416942 SPATA31C2B4DYI2 1134 aa10.88□□□□□ -0.67
GTF3AP1-201ENST00000416942 POU4F2Q12837 409 aa10.88□□□□□ -0.67
GTF3AP1-201ENST00000416942 TMEM214Q6NUQ4 689 aaKnown RBP10.88□□□□□ -0.67
GTF3AP1-201ENST00000416942 TARBP1Q13395 1621 aaKnown RBP10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 SNAPC4Q5SXM2 1469 aa10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 A6NJY4 79 aa10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 SFI1A8K8P3 1242 aa10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 GTF2E1P29083 439 aaPredicted RBP10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 DPYDQ12882 1025 aa10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 MTFR1Q15390 333 aa10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 PPARGC1BQ86YN6 1023 aaKnown RBP10.87□□□□□ -0.67
GTF3AP1-201ENST00000416942 ANKMY2Q8IV38 441 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms