RNA–Protein interactions for RNA: ENST00000416571.5

MDC1-202, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-202ENST00000416571 EYA1Q99502 592 aa13.88□□□□□ -0.19
MDC1-202ENST00000416571 PHKG2P15735 406 aa13.87□□□□□ -0.19
MDC1-202ENST00000416571 ASAP1Q9ULH1 1129 aa13.87□□□□□ -0.19
MDC1-202ENST00000416571 MMP10P09238 476 aa13.86□□□□□ -0.19
MDC1-202ENST00000416571 ITPK1Q13572 414 aa13.86□□□□□ -0.19
MDC1-202ENST00000416571 RTCBQ9Y3I0 505 aaKnown RBP13.86□□□□□ -0.19
MDC1-202ENST00000416571 TRAPPC3LQ5T215 181 aa13.85□□□□□ -0.19
MDC1-202ENST00000416571 N4BP2Q86UW6 1770 aaPredicted RBP13.84□□□□□ -0.19
MDC1-202ENST00000416571 CICQ96RK0 1608 aaPredicted RBP13.84□□□□□ -0.19
MDC1-202ENST00000416571 POLR3GLQ9BT43 218 aa13.84□□□□□ -0.19
MDC1-202ENST00000416571 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
MDC1-202ENST00000416571 BCS1LQ9Y276 419 aa13.84□□□□□ -0.19
MDC1-202ENST00000416571 KIF13BQ9NQT8 1826 aa13.84□□□□□ -0.19
MDC1-202ENST00000416571 PXDNLA1KZ92 1463 aa13.83□□□□□ -0.2
MDC1-202ENST00000416571 TNNT2P45379 298 aaPredicted RBP13.83□□□□□ -0.2
MDC1-202ENST00000416571 TGFB2P61812 414 aa13.83□□□□□ -0.2
MDC1-202ENST00000416571 NLGN1Q8N2Q7 840 aa13.83□□□□□ -0.2
MDC1-202ENST00000416571 RBM42Q9BTD8 480 aaKnown RBP13.83□□□□□ -0.2
MDC1-202ENST00000416571 POLKQ9UBT6 870 aa13.83□□□□□ -0.2
MDC1-202ENST00000416571 PLEKHG2Q9H7P9 1386 aa13.83□□□□□ -0.2
MDC1-202ENST00000416571 HSP90AB1P08238 724 aaKnown RBP13.82□□□□□ -0.2
MDC1-202ENST00000416571 EIF4A2Q14240 407 aaKnown RBP13.82□□□□□ -0.2
MDC1-202ENST00000416571 KDRP35968 1356 aa13.82□□□□□ -0.2
MDC1-202ENST00000416571 ZNF831Q5JPB2 1677 aa13.82□□□□□ -0.2
MDC1-202ENST00000416571 COL5A3P25940 1745 aaPredicted RBP13.81□□□□□ -0.2
MDC1-202ENST00000416571 KIAA1551Q9HCM1 1747 aa13.81□□□□□ -0.2
MDC1-202ENST00000416571 ERVV-2B6SEH9 535 aa13.81□□□□□ -0.2
MDC1-202ENST00000416571 KIF3CO14782 793 aa13.81□□□□□ -0.2
MDC1-202ENST00000416571 ADRA2BP18089 450 aa13.81□□□□□ -0.2
MDC1-202ENST00000416571 DNAJC5GQ8N7S2 189 aa13.81□□□□□ -0.2
MDC1-202ENST00000416571 CCDC87Q9NVE4 849 aa13.81□□□□□ -0.2
MDC1-202ENST00000416571 C4AP0C0L4 1744 aa13.81□□□□□ -0.2
MDC1-202ENST00000416571 C10orf71Q711Q0 1435 aa13.81□□□□□ -0.2
MDC1-202ENST00000416571 A0A0G2JLW4 131 aa13.8□□□□□ -0.2
MDC1-202ENST00000416571 RFC4P35249 363 aa13.8□□□□□ -0.2
MDC1-202ENST00000416571 PLEKHO1Q53GL0 409 aaPredicted RBP13.8□□□□□ -0.2
MDC1-202ENST00000416571 ARHGAP27Q6ZUM4 889 aa13.8□□□□□ -0.2
MDC1-202ENST00000416571 DCAF5Q96JK2 942 aa13.8□□□□□ -0.2
MDC1-202ENST00000416571 PARP3Q9Y6F1 533 aa13.8□□□□□ -0.2
MDC1-202ENST00000416571 PCNTO95613 3336 aa13.8□□□□□ -0.2
MDC1-202ENST00000416571 FCHSD2O94868 740 aa13.79□□□□□ -0.2
MDC1-202ENST00000416571 CABP4P57796 275 aa13.79□□□□□ -0.2
MDC1-202ENST00000416571 RC3H1Q5TC82 1133 aaKnown RBP13.79□□□□□ -0.2
MDC1-202ENST00000416571 ARHGEF1Q92888 912 aaKnown RBP13.79□□□□□ -0.2
MDC1-202ENST00000416571 CNTNAP4Q9C0A0 1308 aa13.79□□□□□ -0.2
MDC1-202ENST00000416571 TOMM70O94826 608 aa13.78□□□□□ -0.2
MDC1-202ENST00000416571 APLP1P51693 650 aa13.78□□□□□ -0.2
MDC1-202ENST00000416571 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
MDC1-202ENST00000416571 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
MDC1-202ENST00000416571 RPS6KA4O75676 772 aa13.77□□□□□ -0.21
MDC1-202ENST00000416571 GYS1P13807 737 aa13.77□□□□□ -0.21
MDC1-202ENST00000416571 DPEP1P16444 411 aa13.77□□□□□ -0.21
MDC1-202ENST00000416571 BRCA1P38398 1863 aaKnown RBP13.77□□□□□ -0.21
MDC1-202ENST00000416571 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
MDC1-202ENST00000416571 SLC4A9Q96Q91 983 aa13.77□□□□□ -0.21
MDC1-202ENST00000416571 C16orf71Q8IYS4 520 aaPredicted RBP13.76□□□□□ -0.21
MDC1-202ENST00000416571 TIMELESSQ9UNS1 1208 aa13.76□□□□□ -0.21
MDC1-202ENST00000416571 ARFGEF1Q9Y6D6 1849 aa13.76□□□□□ -0.21
MDC1-202ENST00000416571 KDM6AO15550 1401 aaPredicted RBP13.75□□□□□ -0.21
MDC1-202ENST00000416571 PTCD1O75127 700 aaKnown RBP13.75□□□□□ -0.21
MDC1-202ENST00000416571 MTHFSP49914 203 aa13.75□□□□□ -0.21
MDC1-202ENST00000416571 TRIM26Q12899 539 aaPredicted RBP13.75□□□□□ -0.21
MDC1-202ENST00000416571 MYH14Q7Z406 1995 aaKnown RBP13.74□□□□□ -0.21
MDC1-202ENST00000416571 NMRK2Q9NPI5 230 aa13.74□□□□□ -0.21
MDC1-202ENST00000416571 PIM2Q9P1W9 311 aa13.74□□□□□ -0.21
MDC1-202ENST00000416571 CRKLP46109 303 aaKnown RBP13.73□□□□□ -0.21
MDC1-202ENST00000416571 C9orf131Q5VYM1 1079 aa13.73□□□□□ -0.21
MDC1-202ENST00000416571 DALRD3Q5D0E6 543 aaKnown RBP13.72□□□□□ -0.21
MDC1-202ENST00000416571 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
MDC1-202ENST00000416571 NFATC2IPQ8NCF5 419 aa13.72□□□□□ -0.21
MDC1-202ENST00000416571 WDR90Q96KV7 1748 aa13.72□□□□□ -0.21
MDC1-202ENST00000416571 KDM2BQ8NHM5 1336 aa13.71□□□□□ -0.21
MDC1-202ENST00000416571 USP42Q9H9J4 1324 aaKnown RBP13.71□□□□□ -0.21
MDC1-202ENST00000416571 TJP1Q07157 1748 aa13.71□□□□□ -0.21
MDC1-202ENST00000416571 RBM46Q8TBY0 533 aaKnown RBP13.71□□□□□ -0.21
MDC1-202ENST00000416571 PANK3Q9H999 370 aa13.71□□□□□ -0.21
MDC1-202ENST00000416571 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.21
MDC1-202ENST00000416571 SCN11AQ9UI33 1791 aa13.71□□□□□ -0.22
MDC1-202ENST00000416571 KCNA3P22001 575 aa13.7□□□□□ -0.22
MDC1-202ENST00000416571 EIF4G2P78344 907 aaKnown RBP eCLIP13.7□□□□□ -0.22
MDC1-202ENST00000416571 FKBP8Q14318 412 aa13.7□□□□□ -0.22
MDC1-202ENST00000416571 SULT6B1Q6IMI4 303 aa13.7□□□□□ -0.22
MDC1-202ENST00000416571 AEBP1Q8IUX7 1158 aa13.7□□□□□ -0.22
MDC1-202ENST00000416571 RNF181Q9P0P0 153 aa13.7□□□□□ -0.22
MDC1-202ENST00000416571 ZPR1O75312 459 aa13.69□□□□□ -0.22
MDC1-202ENST00000416571 KCPQ6ZWJ8 1503 aa13.69□□□□□ -0.22
MDC1-202ENST00000416571 TNRC6CQ9HCJ0 1690 aaKnown RBP13.69□□□□□ -0.22
MDC1-202ENST00000416571 CHRNA5P30532 468 aa13.68□□□□□ -0.22
MDC1-202ENST00000416571 DDR1Q08345 913 aa13.68□□□□□ -0.22
MDC1-202ENST00000416571 JMYQ8N9B5 988 aa13.68□□□□□ -0.22
MDC1-202ENST00000416571 CLSPNQ9HAW4 1339 aa13.67□□□□□ -0.22
MDC1-202ENST00000416571 FSTL1Q12841 308 aa13.67□□□□□ -0.22
MDC1-202ENST00000416571 KNSTRNQ9Y448 316 aa13.67□□□□□ -0.22
MDC1-202ENST00000416571 SBF1O95248 1867 aa13.66□□□□□ -0.22
MDC1-202ENST00000416571 POLRMTO00411 1230 aaKnown RBP13.66□□□□□ -0.22
MDC1-202ENST00000416571 HSPA5P11021 654 aaKnown RBP13.66□□□□□ -0.22
MDC1-202ENST00000416571 AKAP4Q5JQC9 854 aa13.66□□□□□ -0.22
MDC1-202ENST00000416571 USPL1Q5W0Q7 1092 aa13.66□□□□□ -0.22
MDC1-202ENST00000416571 DNAJC10Q8IXB1 793 aa13.66□□□□□ -0.22
MDC1-202ENST00000416571 RRAGCQ9HB90 399 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms