RNA–Protein interactions for RNA: ENST00000416500.5

LCP1-203, Transcript of lymphocyte cytosolic protein 1, humanhuman

TSL 3

Gene LCP1, Length 819 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCP1-203ENST00000416500 WNK3Q9BYP7 1800 aa12.14□□□□□ -0.47
LCP1-203ENST00000416500 EIF4A2Q14240 407 aaKnown RBP12.13□□□□□ -0.47
LCP1-203ENST00000416500 USHBP1Q8N6Y0 703 aa12.13□□□□□ -0.47
LCP1-203ENST00000416500 FAM208AQ9UK61 1670 aaKnown RBP12.13□□□□□ -0.47
LCP1-203ENST00000416500 DISP2A7MBM2 1401 aa12.12□□□□□ -0.47
LCP1-203ENST00000416500 G3V3G9 751 aa12.12□□□□□ -0.47
LCP1-203ENST00000416500 FAM182BQ5T319 152 aa12.12□□□□□ -0.47
LCP1-203ENST00000416500 OTUD5Q96G74 571 aa12.12□□□□□ -0.47
LCP1-203ENST00000416500 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.12□□□□□ -0.47
LCP1-203ENST00000416500 PPP2R1AP30153 589 aa12.11□□□□□ -0.47
LCP1-203ENST00000416500 KRT27Q7Z3Y8 459 aa12.11□□□□□ -0.47
LCP1-203ENST00000416500 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
LCP1-203ENST00000416500 EYA1Q99502 592 aa12.11□□□□□ -0.47
LCP1-203ENST00000416500 PARP4Q9UKK3 1724 aaKnown RBP12.11□□□□□ -0.47
LCP1-203ENST00000416500 EP400Q96L91 3159 aa12.1□□□□□ -0.47
LCP1-203ENST00000416500 PARD3Q8TEW0 1356 aa12.1□□□□□ -0.47
LCP1-203ENST00000416500 LRRC37A3O60309 1634 aa12.09□□□□□ -0.47
LCP1-203ENST00000416500 IL2RBP14784 551 aa12.09□□□□□ -0.47
LCP1-203ENST00000416500 IL13P35225 146 aa12.09□□□□□ -0.47
LCP1-203ENST00000416500 DPY19L2Q6NUT2 758 aa12.09□□□□□ -0.47
LCP1-203ENST00000416500 MEGF6O75095 1541 aa12.08□□□□□ -0.48
LCP1-203ENST00000416500 SOCS7O14512 581 aa12.08□□□□□ -0.48
LCP1-203ENST00000416500 CDCA7Q9BWT1 371 aaPredicted RBP12.08□□□□□ -0.48
LCP1-203ENST00000416500 NCAPD2Q15021 1401 aa12.08□□□□□ -0.48
LCP1-203ENST00000416500 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.48
LCP1-203ENST00000416500 DDB1Q16531 1140 aa12.07□□□□□ -0.48
LCP1-203ENST00000416500 RGPD1P0DJD0 1748 aa12.06□□□□□ -0.48
LCP1-203ENST00000416500 EXOC5O00471 708 aa12.06□□□□□ -0.48
LCP1-203ENST00000416500 PDE3BQ13370 1112 aa12.06□□□□□ -0.48
LCP1-203ENST00000416500 AEBP1Q8IUX7 1158 aa12.06□□□□□ -0.48
LCP1-203ENST00000416500 MARCH10Q8NA82 808 aaPredicted RBP12.06□□□□□ -0.48
LCP1-203ENST00000416500 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
LCP1-203ENST00000416500 IGSF1Q8N6C5 1336 aa12.06□□□□□ -0.48
LCP1-203ENST00000416500 KAT6BQ8WYB5 2073 aa12.06□□□□□ -0.48
LCP1-203ENST00000416500 RALBP1Q15311 655 aa12.05□□□□□ -0.48
LCP1-203ENST00000416500 MFRPQ9BY79 579 aa12.05□□□□□ -0.48
LCP1-203ENST00000416500 SHANK3Q9BYB0 1731 aa12.05□□□□□ -0.48
LCP1-203ENST00000416500 OVOS2A0A0G2JMS6 1433 aa12.04□□□□□ -0.48
LCP1-203ENST00000416500 TNS2Q63HR2 1409 aa12.04□□□□□ -0.48
LCP1-203ENST00000416500 DIAPH1O60610 1272 aaKnown RBP12.04□□□□□ -0.48
LCP1-203ENST00000416500 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
LCP1-203ENST00000416500 RAPGEF4Q8WZA2 1011 aa12.04□□□□□ -0.48
LCP1-203ENST00000416500 PRKRIP1Q9H875 184 aaPredicted RBP12.04□□□□□ -0.48
LCP1-203ENST00000416500 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
LCP1-203ENST00000416500 BOLA1Q9Y3E2 137 aa12.04□□□□□ -0.48
LCP1-203ENST00000416500 SBF2Q86WG5 1849 aa12.03□□□□□ -0.48
LCP1-203ENST00000416500 TATP17735 454 aaPredicted RBP12.03□□□□□ -0.48
LCP1-203ENST00000416500 SULT6B1Q6IMI4 303 aa12.03□□□□□ -0.48
LCP1-203ENST00000416500 FBXO22Q8NEZ5 403 aa12.03□□□□□ -0.48
LCP1-203ENST00000416500 ZCRB1Q8TBF4 217 aaKnown RBP12.03□□□□□ -0.48
LCP1-203ENST00000416500 HMOX1P09601 288 aa12.02□□□□□ -0.49
LCP1-203ENST00000416500 FAM196AQ6ZSG2 479 aa12.02□□□□□ -0.49
LCP1-203ENST00000416500 DDX54Q8TDD1 881 aaKnown RBP12.02□□□□□ -0.49
LCP1-203ENST00000416500 MS4A4AQ96JQ5 239 aa12.02□□□□□ -0.49
LCP1-203ENST00000416500 PKD1L3Q7Z443 1732 aa12.01□□□□□ -0.49
LCP1-203ENST00000416500 U2SURPO15042 1029 aaKnown RBP12.01□□□□□ -0.49
LCP1-203ENST00000416500 PTF1AQ7RTS3 328 aa12.01□□□□□ -0.49
LCP1-203ENST00000416500 CFAP53Q96M91 514 aa12.01□□□□□ -0.49
LCP1-203ENST00000416500 MYBBP1AQ9BQG0 1328 aaKnown RBP12.01□□□□□ -0.49
LCP1-203ENST00000416500 KDRP35968 1356 aa12.01□□□□□ -0.49
LCP1-203ENST00000416500 CYP27B1O15528 508 aa12□□□□□ -0.49
LCP1-203ENST00000416500 TRIM37O94972 964 aa12□□□□□ -0.49
LCP1-203ENST00000416500 SLAIN1Q8ND83 568 aa11.99□□□□□ -0.49
LCP1-203ENST00000416500 BCL9O00512 1426 aa11.98□□□□□ -0.49
LCP1-203ENST00000416500 KCNQ2O43526 872 aa11.98□□□□□ -0.49
LCP1-203ENST00000416500 PAXIP1Q6ZW49 1069 aaPredicted RBP11.98□□□□□ -0.49
LCP1-203ENST00000416500 ACSBG1Q96GR2 724 aa11.98□□□□□ -0.49
LCP1-203ENST00000416500 CFAP44Q96MT7 982 aa11.98□□□□□ -0.49
LCP1-203ENST00000416500 RYDENQ9NUL5 291 aaKnown RBP11.98□□□□□ -0.49
LCP1-203ENST00000416500 TNS1Q9HBL0 1735 aaKnown RBP11.97□□□□□ -0.49
LCP1-203ENST00000416500 CCDC184Q52MB2 194 aa11.97□□□□□ -0.49
LCP1-203ENST00000416500 DEFB132Q7Z7B7 95 aa11.97□□□□□ -0.49
LCP1-203ENST00000416500 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
LCP1-203ENST00000416500 SPG7Q9UQ90 795 aa11.97□□□□□ -0.49
LCP1-203ENST00000416500 PCDH11XQ9BZA7 1347 aa11.96□□□□□ -0.49
LCP1-203ENST00000416500 PCDH11YQ9BZA8 1340 aa11.96□□□□□ -0.49
LCP1-203ENST00000416500 U2AF1L5P0DN76 240 aaPredicted RBP11.96□□□□□ -0.49
LCP1-203ENST00000416500 U2AF1Q01081 240 aaKnown RBP eCLIP11.96□□□□□ -0.49
LCP1-203ENST00000416500 PLEKHO1Q53GL0 409 aaPredicted RBP11.96□□□□□ -0.49
LCP1-203ENST00000416500 CCDC125Q86Z20 511 aa11.96□□□□□ -0.49
LCP1-203ENST00000416500 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
LCP1-203ENST00000416500 NUDCQ9Y266 331 aa11.96□□□□□ -0.49
LCP1-203ENST00000416500 PHKG2P15735 406 aa11.95□□□□□ -0.5
LCP1-203ENST00000416500 ZNF530Q6P9A1 599 aaPredicted RBP11.95□□□□□ -0.5
LCP1-203ENST00000416500 MICALL2Q8IY33 904 aa11.95□□□□□ -0.5
LCP1-203ENST00000416500 PHACTR3Q96KR7 559 aa11.95□□□□□ -0.5
LCP1-203ENST00000416500 DOT1LQ8TEK3 1739 aa11.94□□□□□ -0.5
LCP1-203ENST00000416500 TOGARAM1Q9Y4F4 1720 aa11.94□□□□□ -0.5
LCP1-203ENST00000416500 NHSQ6T4R5 1651 aa11.94□□□□□ -0.5
LCP1-203ENST00000416500 ANP32CO43423 234 aa11.94□□□□□ -0.5
LCP1-203ENST00000416500 PRKAR2BP31323 418 aa11.94□□□□□ -0.5
LCP1-203ENST00000416500 PRIM1P49642 420 aaKnown RBP11.94□□□□□ -0.5
LCP1-203ENST00000416500 EN1Q05925 392 aaPredicted RBP11.94□□□□□ -0.5
LCP1-203ENST00000416500 NKX1-1Q15270 411 aaPredicted RBP11.94□□□□□ -0.5
LCP1-203ENST00000416500 MTHFSDQ2M296 383 aaKnown RBP11.94□□□□□ -0.5
LCP1-203ENST00000416500 AMOTQ4VCS5 1084 aa11.94□□□□□ -0.5
LCP1-203ENST00000416500 IFNL2Q8IZJ0 200 aa11.94□□□□□ -0.5
LCP1-203ENST00000416500 TMEM121BQ9BXQ6 578 aaPredicted RBP11.94□□□□□ -0.5
LCP1-203ENST00000416500 ITGB4P16144 1822 aa11.94□□□□□ -0.5
LCP1-203ENST00000416500 PLEKHG2Q9H7P9 1386 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms