RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 CNPY2Q9Y2B0 182 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 USHBP1Q8N6Y0 703 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 TCEAL9Q9UHQ7 104 aa15.24■□□□□ 0.03
SCN1B-202ENST00000415950 CCDC8Q9H0W5 538 aaPredicted RBP15.23■□□□□ 0.03
SCN1B-202ENST00000415950 GPATCH8Q9UKJ3 1502 aaKnown RBP15.23■□□□□ 0.03
SCN1B-202ENST00000415950 ZFYVE27Q5T4F4 411 aa15.23■□□□□ 0.03
SCN1B-202ENST00000415950 RALGAPBQ86X10 1494 aa15.23■□□□□ 0.03
SCN1B-202ENST00000415950 LRSAM1Q6UWE0 723 aa15.23■□□□□ 0.03
SCN1B-202ENST00000415950 CCDC183Q5T5S1 534 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 CCDC85AQ96PX6 553 aaPredicted RBP15.22■□□□□ 0.03
SCN1B-202ENST00000415950 CWC15Q9P013 229 aaKnown RBP15.22■□□□□ 0.03
SCN1B-202ENST00000415950 ZKSCAN5Q9Y2L8 839 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 PRAG1Q86YV5 1406 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 IDI1Q13907 227 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 USP48Q86UV5 1035 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 IQGAP2Q13576 1575 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 RAB11FIP3O75154 756 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 PKP1Q13835 747 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 TAF7Q15545 349 aaPredicted RBP15.22■□□□□ 0.03
SCN1B-202ENST00000415950 TMX1Q9H3N1 280 aa15.22■□□□□ 0.03
SCN1B-202ENST00000415950 TNNT1P13805 278 aa15.21■□□□□ 0.03
SCN1B-202ENST00000415950 CPA1P15085 419 aa15.21■□□□□ 0.03
SCN1B-202ENST00000415950 CDR1P51861 262 aa15.21■□□□□ 0.02
SCN1B-202ENST00000415950 NOLC1Q14978 699 aaKnown RBP eCLIP15.21■□□□□ 0.02
SCN1B-202ENST00000415950 AEBP1Q8IUX7 1158 aa15.21■□□□□ 0.02
SCN1B-202ENST00000415950 FBXO31Q5XUX0 539 aaPredicted RBP15.2■□□□□ 0.02
SCN1B-202ENST00000415950 ISM2Q6H9L7 571 aa15.2■□□□□ 0.02
SCN1B-202ENST00000415950 NUDT16Q96DE0 195 aaKnown RBP15.2■□□□□ 0.02
SCN1B-202ENST00000415950 CCDC141Q6ZP82 1450 aa15.2■□□□□ 0.02
SCN1B-202ENST00000415950 LEKR1Q6ZMV7 388 aa15.2■□□□□ 0.02
SCN1B-202ENST00000415950 SNX21Q969T3 373 aa15.2■□□□□ 0.02
SCN1B-202ENST00000415950 STX6O43752 255 aa15.2■□□□□ 0.02
SCN1B-202ENST00000415950 UGGT2Q9NYU1 1516 aa15.19■□□□□ 0.02
SCN1B-202ENST00000415950 BIN1O00499 593 aa15.19■□□□□ 0.02
SCN1B-202ENST00000415950 RBM33Q96EV2 1170 aaKnown RBP15.19■□□□□ 0.02
SCN1B-202ENST00000415950 TRIM34Q9BYJ4 488 aa15.19■□□□□ 0.02
SCN1B-202ENST00000415950 SPATA31E1Q6ZUB1 1445 aa15.19■□□□□ 0.02
SCN1B-202ENST00000415950 EPS15P42566 896 aa15.19■□□□□ 0.02
SCN1B-202ENST00000415950 FILIP1LQ4L180 1135 aa15.19■□□□□ 0.02
SCN1B-202ENST00000415950 JARID2Q92833 1246 aaPredicted RBP15.19■□□□□ 0.02
SCN1B-202ENST00000415950 PLCD4Q9BRC7 762 aa15.19■□□□□ 0.02
SCN1B-202ENST00000415950 CCDC61Q9Y6R9 512 aa15.19■□□□□ 0.02
SCN1B-202ENST00000415950 SCAF11Q99590 1463 aaKnown RBP15.19■□□□□ 0.02
SCN1B-202ENST00000415950 GJB2P29033 226 aa15.18■□□□□ 0.02
SCN1B-202ENST00000415950 PLEKHM2Q8IWE5 1019 aa15.18■□□□□ 0.02
SCN1B-202ENST00000415950 CCDC43Q96MW1 224 aaKnown RBP15.18■□□□□ 0.02
SCN1B-202ENST00000415950 LIMCH1Q9UPQ0 1083 aa15.18■□□□□ 0.02
SCN1B-202ENST00000415950 VAMP4O75379 141 aa15.18■□□□□ 0.02
SCN1B-202ENST00000415950 PDE1AP54750 535 aa15.18■□□□□ 0.02
SCN1B-202ENST00000415950 HSP90AB3PQ58FF7 597 aa15.18■□□□□ 0.02
SCN1B-202ENST00000415950 ERCC4Q92889 916 aaPredicted RBP15.18■□□□□ 0.02
SCN1B-202ENST00000415950 ZNF396Q96N95 335 aaPredicted RBP15.18■□□□□ 0.02
SCN1B-202ENST00000415950 POLR3GO15318 223 aaPredicted RBP15.18■□□□□ 0.02
SCN1B-202ENST00000415950 PTPN14Q15678 1187 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 CCDC186Q7Z3E2 898 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 RTEL1-TNFRSF6BF6WH68 1400 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 FAM193AP78312 1265 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 DNM1Q05193 864 aaKnown RBP15.17■□□□□ 0.02
SCN1B-202ENST00000415950 CLIP2Q9UDT6 1046 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 NOS1P29475 1434 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 DYNC1I1O14576 645 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 XBP1P17861 261 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 FAM173BQ6P4H8 233 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 ZNF530Q6P9A1 599 aaPredicted RBP15.17■□□□□ 0.02
SCN1B-202ENST00000415950 RAB11FIP4Q86YS3 637 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 ZFP91Q96JP5 570 aaPredicted RBP15.17■□□□□ 0.02
SCN1B-202ENST00000415950 LRRC2Q9BYS8 371 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 CENPHQ9H3R5 247 aa15.17■□□□□ 0.02
SCN1B-202ENST00000415950 CCT2P78371 535 aaKnown RBP15.16■□□□□ 0.02
SCN1B-202ENST00000415950 FLIIQ13045 1269 aa15.16■□□□□ 0.02
SCN1B-202ENST00000415950 BRMS1Q9HCU9 246 aa15.16■□□□□ 0.02
SCN1B-202ENST00000415950 TEX14Q8IWB6 1497 aa15.16■□□□□ 0.02
SCN1B-202ENST00000415950 CD2BP2O95400 341 aaKnown RBP15.16■□□□□ 0.02
SCN1B-202ENST00000415950 RDXP35241 583 aaKnown RBP15.16■□□□□ 0.02
SCN1B-202ENST00000415950 ZNF165P49910 485 aa15.16■□□□□ 0.02
SCN1B-202ENST00000415950 FKBP4Q02790 459 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCN1B-202ENST00000415950 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.16■□□□□ 0.02
SCN1B-202ENST00000415950 HSP90AB2PQ58FF8 381 aa15.16■□□□□ 0.02
SCN1B-202ENST00000415950 MRPL50Q8N5N7 158 aaKnown RBP15.16■□□□□ 0.02
SCN1B-202ENST00000415950 ODF2Q5BJF6 829 aa15.16■□□□□ 0.02
SCN1B-202ENST00000415950 PZPP20742 1482 aa15.15■□□□□ 0.02
SCN1B-202ENST00000415950 PPP1R42Q7Z4L9 355 aa15.15■□□□□ 0.02
SCN1B-202ENST00000415950 KIF1BPQ96EK5 621 aa15.15■□□□□ 0.02
SCN1B-202ENST00000415950 ZBTB7BO15156 539 aaPredicted RBP15.15■□□□□ 0.02
SCN1B-202ENST00000415950 SART3Q15020 963 aaKnown RBP15.15■□□□□ 0.02
SCN1B-202ENST00000415950 PPFIBP1Q86W92 1011 aa15.15■□□□□ 0.02
SCN1B-202ENST00000415950 CCDC191Q8NCU4 936 aa15.15■□□□□ 0.02
SCN1B-202ENST00000415950 SMARCE1Q969G3 411 aa15.15■□□□□ 0.02
SCN1B-202ENST00000415950 HSP90AA4PQ58FG1 418 aa15.14■□□□□ 0.01
SCN1B-202ENST00000415950 USP26Q9BXU7 913 aa15.14■□□□□ 0.01
SCN1B-202ENST00000415950 TARBP1Q13395 1621 aaKnown RBP15.14■□□□□ 0.01
SCN1B-202ENST00000415950 CCDC82Q8N4S0 544 aa15.14■□□□□ 0.01
SCN1B-202ENST00000415950 PPP6R1Q9UPN7 881 aa15.14■□□□□ 0.01
SCN1B-202ENST00000415950 TBC1D2BQ9UPU7 963 aa15.14■□□□□ 0.01
SCN1B-202ENST00000415950 CTDP1Q9Y5B0 961 aaPredicted RBP15.14■□□□□ 0.01
SCN1B-202ENST00000415950 ADAMTS12P58397 1594 aa15.14■□□□□ 0.01
SCN1B-202ENST00000415950 NCKAP5LQ9HCH0 1330 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 ANKRD44Q8N8A2 993 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 UBXN4Q92575 508 aa15.13■□□□□ 0.01
SCN1B-202ENST00000415950 C14orf93Q9H972 538 aaKnown RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms