RNA–Protein interactions for RNA: ENST00000415886.2

CTHRC1-202, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 2 BASIC

Gene CTHRC1, Length 571 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-202ENST00000415886 KIAA1551Q9HCM1 1747 aa18.32■□□□□ 0.52
CTHRC1-202ENST00000415886 WASHC2AQ641Q2 1341 aa18.32■□□□□ 0.52
CTHRC1-202ENST00000415886 KIF3CO14782 793 aa18.32■□□□□ 0.52
CTHRC1-202ENST00000415886 PHKG2P15735 406 aa18.32■□□□□ 0.52
CTHRC1-202ENST00000415886 PXDNLA1KZ92 1463 aa18.32■□□□□ 0.52
CTHRC1-202ENST00000415886 MMP10P09238 476 aa18.31■□□□□ 0.52
CTHRC1-202ENST00000415886 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTHRC1-202ENST00000415886 KIF13BQ9NQT8 1826 aa18.3■□□□□ 0.52
CTHRC1-202ENST00000415886 IFNL2Q8IZJ0 200 aa18.3■□□□□ 0.52
CTHRC1-202ENST00000415886 ATG3Q9NT62 314 aa18.3■□□□□ 0.52
CTHRC1-202ENST00000415886 N4BP2Q86UW6 1770 aaPredicted RBP18.3■□□□□ 0.52
CTHRC1-202ENST00000415886 KDRP35968 1356 aa18.3■□□□□ 0.52
CTHRC1-202ENST00000415886 POLKQ9UBT6 870 aa18.28■□□□□ 0.52
CTHRC1-202ENST00000415886 C10orf71Q711Q0 1435 aa18.27■□□□□ 0.52
CTHRC1-202ENST00000415886 BCS1LQ9Y276 419 aa18.27■□□□□ 0.52
CTHRC1-202ENST00000415886 A0A0G2JLW4 131 aa18.26■□□□□ 0.51
CTHRC1-202ENST00000415886 SLC4A9Q96Q91 983 aa18.26■□□□□ 0.51
CTHRC1-202ENST00000415886 RTCBQ9Y3I0 505 aaKnown RBP18.26■□□□□ 0.51
CTHRC1-202ENST00000415886 EIF4A2Q14240 407 aaKnown RBP18.25■□□□□ 0.51
CTHRC1-202ENST00000415886 TRAPPC3LQ5T215 181 aa18.25■□□□□ 0.51
CTHRC1-202ENST00000415886 C4AP0C0L4 1744 aa18.24■□□□□ 0.51
CTHRC1-202ENST00000415886 COL5A3P25940 1745 aaPredicted RBP18.24■□□□□ 0.51
CTHRC1-202ENST00000415886 TGFB2P61812 414 aa18.24■□□□□ 0.51
CTHRC1-202ENST00000415886 RBM42Q9BTD8 480 aaKnown RBP18.24■□□□□ 0.51
CTHRC1-202ENST00000415886 ZNF831Q5JPB2 1677 aa18.24■□□□□ 0.51
CTHRC1-202ENST00000415886 TNNT2P45379 298 aaPredicted RBP18.23■□□□□ 0.51
CTHRC1-202ENST00000415886 NLGN1Q8N2Q7 840 aa18.23■□□□□ 0.51
CTHRC1-202ENST00000415886 ARHGEF1Q92888 912 aaKnown RBP18.23■□□□□ 0.51
CTHRC1-202ENST00000415886 GYS1P13807 737 aa18.22■□□□□ 0.51
CTHRC1-202ENST00000415886 DPEP1P16444 411 aa18.22■□□□□ 0.51
CTHRC1-202ENST00000415886 ARHGAP27Q6ZUM4 889 aa18.22■□□□□ 0.51
CTHRC1-202ENST00000415886 CNTNAP4Q9C0A0 1308 aa18.22■□□□□ 0.51
CTHRC1-202ENST00000415886 PLEKHG2Q9H7P9 1386 aa18.21■□□□□ 0.51
CTHRC1-202ENST00000415886 BRCA1P38398 1863 aaKnown RBP18.21■□□□□ 0.51
CTHRC1-202ENST00000415886 ERVV-2B6SEH9 535 aa18.21■□□□□ 0.51
CTHRC1-202ENST00000415886 APLP1P51693 650 aa18.21■□□□□ 0.51
CTHRC1-202ENST00000415886 NMRK2Q9NPI5 230 aa18.21■□□□□ 0.51
CTHRC1-202ENST00000415886 CCDC87Q9NVE4 849 aa18.21■□□□□ 0.51
CTHRC1-202ENST00000415886 KDM6AO15550 1401 aaPredicted RBP18.21■□□□□ 0.51
CTHRC1-202ENST00000415886 TOMM70O94826 608 aa18.2■□□□□ 0.5
CTHRC1-202ENST00000415886 FCHSD2O94868 740 aa18.2■□□□□ 0.5
CTHRC1-202ENST00000415886 ADRA2BP18089 450 aa18.2■□□□□ 0.5
CTHRC1-202ENST00000415886 RC3H1Q5TC82 1133 aaKnown RBP18.2■□□□□ 0.5
CTHRC1-202ENST00000415886 RPS6KA4O75676 772 aa18.19■□□□□ 0.5
CTHRC1-202ENST00000415886 RFC4P35249 363 aa18.19■□□□□ 0.5
CTHRC1-202ENST00000415886 EIF4G2P78344 907 aaKnown RBP eCLIP18.19■□□□□ 0.5
CTHRC1-202ENST00000415886 DCAF5Q96JK2 942 aa18.19■□□□□ 0.5
CTHRC1-202ENST00000415886 POLR3GLQ9BT43 218 aa18.19■□□□□ 0.5
CTHRC1-202ENST00000415886 PARP3Q9Y6F1 533 aa18.19■□□□□ 0.5
CTHRC1-202ENST00000415886 MYH14Q7Z406 1995 aaKnown RBP18.17■□□□□ 0.5
CTHRC1-202ENST00000415886 HSP90AB1P08238 724 aaKnown RBP18.17■□□□□ 0.5
CTHRC1-202ENST00000415886 KCNA3P22001 575 aa18.17■□□□□ 0.5
CTHRC1-202ENST00000415886 CABP4P57796 275 aa18.17■□□□□ 0.5
CTHRC1-202ENST00000415886 ZNF530Q6P9A1 599 aaPredicted RBP18.17■□□□□ 0.5
CTHRC1-202ENST00000415886 DNAJC5GQ8N7S2 189 aa18.17■□□□□ 0.5
CTHRC1-202ENST00000415886 PLEKHO1Q53GL0 409 aaPredicted RBP18.16■□□□□ 0.5
CTHRC1-202ENST00000415886 C9orf131Q5VYM1 1079 aa18.16■□□□□ 0.5
CTHRC1-202ENST00000415886 ARFGEF1Q9Y6D6 1849 aa18.16■□□□□ 0.5
CTHRC1-202ENST00000415886 PTCD1O75127 700 aaKnown RBP18.15■□□□□ 0.5
CTHRC1-202ENST00000415886 SRP68Q9UHB9 627 aaKnown RBP18.15■□□□□ 0.5
CTHRC1-202ENST00000415886 TJP1Q07157 1748 aa18.15■□□□□ 0.5
CTHRC1-202ENST00000415886 WDR90Q96KV7 1748 aa18.15■□□□□ 0.5
CTHRC1-202ENST00000415886 CRKLP46109 303 aaKnown RBP18.14■□□□□ 0.49
CTHRC1-202ENST00000415886 DDR1Q08345 913 aa18.13■□□□□ 0.49
CTHRC1-202ENST00000415886 FKBP8Q14318 412 aa18.13■□□□□ 0.49
CTHRC1-202ENST00000415886 AEBP1Q8IUX7 1158 aa18.13■□□□□ 0.49
CTHRC1-202ENST00000415886 PIM2Q9P1W9 311 aa18.13■□□□□ 0.49
CTHRC1-202ENST00000415886 KCPQ6ZWJ8 1503 aa18.13■□□□□ 0.49
CTHRC1-202ENST00000415886 MTHFSP49914 203 aa18.12■□□□□ 0.49
CTHRC1-202ENST00000415886 AMOTQ4VCS5 1084 aa18.12■□□□□ 0.49
CTHRC1-202ENST00000415886 RBM46Q8TBY0 533 aaKnown RBP18.12■□□□□ 0.49
CTHRC1-202ENST00000415886 USP42Q9H9J4 1324 aaKnown RBP18.12■□□□□ 0.49
CTHRC1-202ENST00000415886 HSPA5P11021 654 aaKnown RBP18.11■□□□□ 0.49
CTHRC1-202ENST00000415886 HTRA3P83110 453 aa18.11■□□□□ 0.49
CTHRC1-202ENST00000415886 DALRD3Q5D0E6 543 aaKnown RBP18.11■□□□□ 0.49
CTHRC1-202ENST00000415886 NFATC2IPQ8NCF5 419 aa18.11■□□□□ 0.49
CTHRC1-202ENST00000415886 ADAMTS7Q9UKP4 1686 aa18.1■□□□□ 0.49
CTHRC1-202ENST00000415886 CHRNA5P30532 468 aa18.1■□□□□ 0.49
CTHRC1-202ENST00000415886 C1orf141Q5JVX7 400 aa18.1■□□□□ 0.49
CTHRC1-202ENST00000415886 C16orf71Q8IYS4 520 aaPredicted RBP18.1■□□□□ 0.49
CTHRC1-202ENST00000415886 RNF181Q9P0P0 153 aa18.1■□□□□ 0.49
CTHRC1-202ENST00000415886 PANK3Q9H999 370 aa18.08■□□□□ 0.48
CTHRC1-202ENST00000415886 KDM2BQ8NHM5 1336 aa18.07■□□□□ 0.48
CTHRC1-202ENST00000415886 POLRMTO00411 1230 aaKnown RBP18.07■□□□□ 0.48
CTHRC1-202ENST00000415886 INTS5Q6P9B9 1019 aaKnown RBP18.07■□□□□ 0.48
CTHRC1-202ENST00000415886 SCN11AQ9UI33 1791 aa18.07■□□□□ 0.48
CTHRC1-202ENST00000415886 TNRC6CQ9HCJ0 1690 aaKnown RBP18.06■□□□□ 0.48
CTHRC1-202ENST00000415886 FSTL1Q12841 308 aa18.06■□□□□ 0.48
CTHRC1-202ENST00000415886 SULT6B1Q6IMI4 303 aa18.06■□□□□ 0.48
CTHRC1-202ENST00000415886 KLRG1Q96E93 195 aa18.06■□□□□ 0.48
CTHRC1-202ENST00000415886 RRAGCQ9HB90 399 aa18.06■□□□□ 0.48
CTHRC1-202ENST00000415886 TM4SF1P30408 202 aa18.05■□□□□ 0.48
CTHRC1-202ENST00000415886 DNAJC10Q8IXB1 793 aa18.05■□□□□ 0.48
CTHRC1-202ENST00000415886 SBF1O95248 1867 aa18.05■□□□□ 0.48
CTHRC1-202ENST00000415886 RASSF7Q02833 373 aa18.04■□□□□ 0.48
CTHRC1-202ENST00000415886 USPL1Q5W0Q7 1092 aa18.04■□□□□ 0.48
CTHRC1-202ENST00000415886 MORC1Q86VD1 984 aa18.04■□□□□ 0.48
CTHRC1-202ENST00000415886 SOS1Q07889 1333 aaPredicted RBP18.03■□□□□ 0.48
CTHRC1-202ENST00000415886 ZPR1O75312 459 aa18.03■□□□□ 0.48
CTHRC1-202ENST00000415886 IL13P35225 146 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms