RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 LINC00116Q8NCU8 138 aa14.59□□□□□ -0.07
LMCD1-203ENST00000415597 C5P01031 1676 aa14.58□□□□□ -0.07
LMCD1-203ENST00000415597 ANKRD26Q9UPS8 1709 aa14.58□□□□□ -0.07
LMCD1-203ENST00000415597 ADRA2BP18089 450 aa14.58□□□□□ -0.08
LMCD1-203ENST00000415597 CHD4Q14839 1912 aa14.58□□□□□ -0.08
LMCD1-203ENST00000415597 RFC4P35249 363 aa14.57□□□□□ -0.08
LMCD1-203ENST00000415597 ITPK1Q13572 414 aa14.57□□□□□ -0.08
LMCD1-203ENST00000415597 RC3H1Q5TC82 1133 aaKnown RBP14.57□□□□□ -0.08
LMCD1-203ENST00000415597 C4BP0C0L5 1744 aa14.57□□□□□ -0.08
LMCD1-203ENST00000415597 ITGB4P16144 1822 aa14.57□□□□□ -0.08
LMCD1-203ENST00000415597 GIGYF1O75420 1035 aaPredicted RBP14.56□□□□□ -0.08
LMCD1-203ENST00000415597 PTCD1O75127 700 aaKnown RBP14.55□□□□□ -0.08
LMCD1-203ENST00000415597 YBX3P16989 372 aaKnown RBP eCLIP14.55□□□□□ -0.08
LMCD1-203ENST00000415597 IL13P35225 146 aa14.55□□□□□ -0.08
LMCD1-203ENST00000415597 AKAP4Q5JQC9 854 aa14.55□□□□□ -0.08
LMCD1-203ENST00000415597 NFATC2IPQ8NCF5 419 aa14.55□□□□□ -0.08
LMCD1-203ENST00000415597 TUBGCP6Q96RT7 1819 aa14.55□□□□□ -0.08
LMCD1-203ENST00000415597 RPS6KA4O75676 772 aa14.54□□□□□ -0.08
LMCD1-203ENST00000415597 MMP10P09238 476 aa14.54□□□□□ -0.08
LMCD1-203ENST00000415597 C1QTNF8P60827 252 aa14.54□□□□□ -0.08
LMCD1-203ENST00000415597 AMER1Q5JTC6 1135 aaPredicted RBP14.54□□□□□ -0.08
LMCD1-203ENST00000415597 AEBP1Q8IUX7 1158 aa14.54□□□□□ -0.08
LMCD1-203ENST00000415597 PARP3Q9Y6F1 533 aa14.54□□□□□ -0.08
LMCD1-203ENST00000415597 KIF7Q2M1P5 1343 aa14.54□□□□□ -0.08
LMCD1-203ENST00000415597 CNTNAP4Q9C0A0 1308 aa14.54□□□□□ -0.08
LMCD1-203ENST00000415597 COL24A1Q17RW2 1714 aa14.54□□□□□ -0.08
LMCD1-203ENST00000415597 TAF1LQ8IZX4 1826 aa14.53□□□□□ -0.08
LMCD1-203ENST00000415597 DIAPH1O60610 1272 aaKnown RBP14.53□□□□□ -0.08
LMCD1-203ENST00000415597 SMIM5Q71RC9 77 aa14.53□□□□□ -0.08
LMCD1-203ENST00000415597 ARHGEF1Q92888 912 aaKnown RBP14.53□□□□□ -0.08
LMCD1-203ENST00000415597 CCDC87Q9NVE4 849 aa14.53□□□□□ -0.08
LMCD1-203ENST00000415597 TOGARAM1Q9Y4F4 1720 aa14.52□□□□□ -0.08
LMCD1-203ENST00000415597 SENP3-EIF4A1A0A087X0R7 540 aa14.52□□□□□ -0.09
LMCD1-203ENST00000415597 TGFB2P61812 414 aa14.52□□□□□ -0.09
LMCD1-203ENST00000415597 CC2D1BQ5T0F9 858 aaKnown RBP14.52□□□□□ -0.09
LMCD1-203ENST00000415597 AMIGO3Q86WK7 504 aa14.52□□□□□ -0.09
LMCD1-203ENST00000415597 HMOX1P09601 288 aa14.51□□□□□ -0.09
LMCD1-203ENST00000415597 KDRP35968 1356 aa14.5□□□□□ -0.09
LMCD1-203ENST00000415597 GPBP1L1Q9HC44 474 aaPredicted RBP14.5□□□□□ -0.09
LMCD1-203ENST00000415597 ZPR1O75312 459 aa14.49□□□□□ -0.09
LMCD1-203ENST00000415597 CRKLP46109 303 aaKnown RBP14.49□□□□□ -0.09
LMCD1-203ENST00000415597 CNGB1Q14028 1251 aaPredicted RBP14.49□□□□□ -0.09
LMCD1-203ENST00000415597 SLC4A9Q96Q91 983 aa14.49□□□□□ -0.09
LMCD1-203ENST00000415597 SLC52A2Q9HAB3 445 aa14.49□□□□□ -0.09
LMCD1-203ENST00000415597 KDM6AO15550 1401 aaPredicted RBP14.49□□□□□ -0.09
LMCD1-203ENST00000415597 U2SURPO15042 1029 aaKnown RBP14.48□□□□□ -0.09
LMCD1-203ENST00000415597 PER1O15534 1290 aaPredicted RBP14.48□□□□□ -0.09
LMCD1-203ENST00000415597 RNMTO43148 476 aaKnown RBP14.48□□□□□ -0.09
LMCD1-203ENST00000415597 GYS1P13807 737 aa14.48□□□□□ -0.09
LMCD1-203ENST00000415597 CFAP53Q96M91 514 aa14.48□□□□□ -0.09
LMCD1-203ENST00000415597 WWC3Q9ULE0 1092 aa14.48□□□□□ -0.09
LMCD1-203ENST00000415597 UBR3Q6ZT12 1888 aa14.48□□□□□ -0.09
LMCD1-203ENST00000415597 TTC5Q8N0Z6 440 aa14.47□□□□□ -0.09
LMCD1-203ENST00000415597 BCS1LQ9Y276 419 aa14.47□□□□□ -0.09
LMCD1-203ENST00000415597 NPM2Q86SE8 214 aaKnown RBP14.46□□□□□ -0.09
LMCD1-203ENST00000415597 GAS2L2Q8NHY3 880 aa14.46□□□□□ -0.09
LMCD1-203ENST00000415597 LGR6Q9HBX8 967 aa14.46□□□□□ -0.09
LMCD1-203ENST00000415597 NUDCQ9Y266 331 aa14.46□□□□□ -0.09
LMCD1-203ENST00000415597 A0A0G2JLW4 131 aa14.45□□□□□ -0.1
LMCD1-203ENST00000415597 FCHSD2O94868 740 aa14.45□□□□□ -0.1
LMCD1-203ENST00000415597 TEFQ10587 303 aa14.45□□□□□ -0.1
LMCD1-203ENST00000415597 MTHFSDQ2M296 383 aaKnown RBP14.45□□□□□ -0.1
LMCD1-203ENST00000415597 NPC1L1Q9UHC9 1359 aa14.45□□□□□ -0.1
LMCD1-203ENST00000415597 ATP10DQ9P241 1426 aa14.44□□□□□ -0.1
LMCD1-203ENST00000415597 STARD3NLO95772 234 aa14.44□□□□□ -0.1
LMCD1-203ENST00000415597 ARHGAP27Q6ZUM4 889 aa14.44□□□□□ -0.1
LMCD1-203ENST00000415597 DNAJC10Q8IXB1 793 aa14.44□□□□□ -0.1
LMCD1-203ENST00000415597 VSIG10Q8N0Z9 540 aa14.44□□□□□ -0.1
LMCD1-203ENST00000415597 ZNF526Q8TF50 670 aaPredicted RBP14.43□□□□□ -0.1
LMCD1-203ENST00000415597 TEX13AQ9BXU3 409 aaPredicted RBP14.43□□□□□ -0.1
LMCD1-203ENST00000415597 PIM2Q9P1W9 311 aa14.43□□□□□ -0.1
LMCD1-203ENST00000415597 ZNF831Q5JPB2 1677 aa14.42□□□□□ -0.1
LMCD1-203ENST00000415597 USP42Q9H9J4 1324 aaKnown RBP14.42□□□□□ -0.1
LMCD1-203ENST00000415597 GNAT3A8MTJ3 354 aa14.42□□□□□ -0.1
LMCD1-203ENST00000415597 DPEP1P16444 411 aa14.42□□□□□ -0.1
LMCD1-203ENST00000415597 SLC39A6Q13433 755 aa14.42□□□□□ -0.1
LMCD1-203ENST00000415597 INTS5Q6P9B9 1019 aaKnown RBP14.42□□□□□ -0.1
LMCD1-203ENST00000415597 A0A087WZG4 1122 aa14.41□□□□□ -0.1
LMCD1-203ENST00000415597 CYP19A1P11511 503 aaPredicted RBP14.41□□□□□ -0.1
LMCD1-203ENST00000415597 FKBP8Q14318 412 aa14.41□□□□□ -0.1
LMCD1-203ENST00000415597 DALRD3Q5D0E6 543 aaKnown RBP14.41□□□□□ -0.1
LMCD1-203ENST00000415597 SRP68Q9UHB9 627 aaKnown RBP14.41□□□□□ -0.1
LMCD1-203ENST00000415597 NEFMP07197 916 aa14.4□□□□□ -0.1
LMCD1-203ENST00000415597 USPL1Q5W0Q7 1092 aa14.4□□□□□ -0.1
LMCD1-203ENST00000415597 NARFQ9UHQ1 456 aa14.4□□□□□ -0.1
LMCD1-203ENST00000415597 CANXP27824 592 aaKnown RBP14.39□□□□□ -0.11
LMCD1-203ENST00000415597 RTF1Q92541 710 aaKnown RBP14.39□□□□□ -0.11
LMCD1-203ENST00000415597 CICQ96RK0 1608 aaPredicted RBP14.39□□□□□ -0.11
LMCD1-203ENST00000415597 C10orf71Q711Q0 1435 aa14.39□□□□□ -0.11
LMCD1-203ENST00000415597 SOS1Q07889 1333 aaPredicted RBP14.39□□□□□ -0.11
LMCD1-203ENST00000415597 PXDNLA1KZ92 1463 aa14.38□□□□□ -0.11
LMCD1-203ENST00000415597 UTRNP46939 3433 aa14.37□□□□□ -0.11
LMCD1-203ENST00000415597 U2AF1L5P0DN76 240 aaPredicted RBP14.37□□□□□ -0.11
LMCD1-203ENST00000415597 TM4SF1P30408 202 aa14.37□□□□□ -0.11
LMCD1-203ENST00000415597 U2AF1Q01081 240 aaKnown RBP eCLIP14.37□□□□□ -0.11
LMCD1-203ENST00000415597 ZNF790Q6PG37 636 aa14.37□□□□□ -0.11
LMCD1-203ENST00000415597 FMNL2Q96PY5 1086 aa14.37□□□□□ -0.11
LMCD1-203ENST00000415597 ADCY9O60503 1353 aa14.36□□□□□ -0.11
LMCD1-203ENST00000415597 POLRMTO00411 1230 aaKnown RBP14.36□□□□□ -0.11
LMCD1-203ENST00000415597 NPHP1O15259 732 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms