RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 CABP4P57796 275 aa33.79■■■■□ 3
HLA-C-204ENST00000415537 MAP3K5Q99683 1374 aa33.77■■■■□ 3
HLA-C-204ENST00000415537 KDM6AO15550 1401 aaPredicted RBP33.76■■■□□ 2.99
HLA-C-204ENST00000415537 UBR3Q6ZT12 1888 aa33.76■■■□□ 2.99
HLA-C-204ENST00000415537 HMOX1P09601 288 aa33.75■■■□□ 2.99
HLA-C-204ENST00000415537 LINC00116Q8NCU8 138 aa33.75■■■□□ 2.99
HLA-C-204ENST00000415537 PHF14O94880 888 aa33.74■■■□□ 2.99
HLA-C-204ENST00000415537 YY1P25490 414 aa33.74■■■□□ 2.99
HLA-C-204ENST00000415537 MSL1Q68DK7 614 aa33.74■■■□□ 2.99
HLA-C-204ENST00000415537 RBM42Q9BTD8 480 aaKnown RBP33.74■■■□□ 2.99
HLA-C-204ENST00000415537 ITPK1Q13572 414 aa33.72■■■□□ 2.99
HLA-C-204ENST00000415537 AKAP4Q5JQC9 854 aa33.71■■■□□ 2.99
HLA-C-204ENST00000415537 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP33.7■■■□□ 2.99
HLA-C-204ENST00000415537 SSFA2P28290 1259 aa33.7■■■□□ 2.99
HLA-C-204ENST00000415537 SCN11AQ9UI33 1791 aa33.7■■■□□ 2.98
HLA-C-204ENST00000415537 NFATC2IPQ8NCF5 419 aa33.69■■■□□ 2.98
HLA-C-204ENST00000415537 GNPATO15228 680 aa33.68■■■□□ 2.98
HLA-C-204ENST00000415537 ZNF831Q5JPB2 1677 aa33.68■■■□□ 2.98
HLA-C-204ENST00000415537 AMIGO3Q86WK7 504 aa33.67■■■□□ 2.98
HLA-C-204ENST00000415537 SMIM5Q71RC9 77 aa33.66■■■□□ 2.98
HLA-C-204ENST00000415537 U2SURPO15042 1029 aaKnown RBP33.65■■■□□ 2.98
HLA-C-204ENST00000415537 VIRMAQ69YN4 1812 aaKnown RBP33.63■■■□□ 2.97
HLA-C-204ENST00000415537 GPR162Q16538 588 aa33.63■■■□□ 2.97
HLA-C-204ENST00000415537 SLC4A9Q96Q91 983 aa33.63■■■□□ 2.97
HLA-C-204ENST00000415537 PTCD1O75127 700 aaKnown RBP33.62■■■□□ 2.97
HLA-C-204ENST00000415537 CFAP53Q96M91 514 aa33.62■■■□□ 2.97
HLA-C-204ENST00000415537 COL3A1P02461 1466 aaPredicted RBP33.62■■■□□ 2.97
HLA-C-204ENST00000415537 MTHFSDQ2M296 383 aaKnown RBP33.61■■■□□ 2.97
HLA-C-204ENST00000415537 RTCBQ9Y3I0 505 aaKnown RBP33.61■■■□□ 2.97
HLA-C-204ENST00000415537 COL5A3P25940 1745 aaPredicted RBP33.59■■■□□ 2.97
HLA-C-204ENST00000415537 NLGN2Q8NFZ4 835 aa33.59■■■□□ 2.97
HLA-C-204ENST00000415537 SLC52A2Q9HAB3 445 aa33.59■■■□□ 2.97
HLA-C-204ENST00000415537 LGR6Q9HBX8 967 aa33.59■■■□□ 2.97
HLA-C-204ENST00000415537 RNMTO43148 476 aaKnown RBP33.58■■■□□ 2.97
HLA-C-204ENST00000415537 TRAPPC3LQ5T215 181 aa33.58■■■□□ 2.97
HLA-C-204ENST00000415537 RC3H1Q5TC82 1133 aaKnown RBP33.58■■■□□ 2.97
HLA-C-204ENST00000415537 PELP1Q8IZL8 1130 aaKnown RBP33.58■■■□□ 2.97
HLA-C-204ENST00000415537 CHD4Q14839 1912 aa33.57■■■□□ 2.96
HLA-C-204ENST00000415537 CNTNAP4Q9C0A0 1308 aa33.55■■■□□ 2.96
HLA-C-204ENST00000415537 CD2APQ9Y5K6 639 aa33.54■■■□□ 2.96
HLA-C-204ENST00000415537 ADRA2BP18089 450 aa33.52■■■□□ 2.96
HLA-C-204ENST00000415537 NUDCQ9Y266 331 aa33.52■■■□□ 2.96
HLA-C-204ENST00000415537 MYH14Q7Z406 1995 aaKnown RBP33.51■■■□□ 2.96
HLA-C-204ENST00000415537 RPS6KA4O75676 772 aa33.51■■■□□ 2.95
HLA-C-204ENST00000415537 PPP2R1AP30153 589 aa33.51■■■□□ 2.95
HLA-C-204ENST00000415537 GAS2L2Q8NHY3 880 aa33.51■■■□□ 2.95
HLA-C-204ENST00000415537 UTRNP46939 3433 aa33.51■■■□□ 2.95
HLA-C-204ENST00000415537 MRC1P22897 1456 aa33.5■■■□□ 2.95
HLA-C-204ENST00000415537 RFC4P35249 363 aa33.49■■■□□ 2.95
HLA-C-204ENST00000415537 ARHGEF1Q92888 912 aaKnown RBP33.49■■■□□ 2.95
HLA-C-204ENST00000415537 ADAMTS7Q9UKP4 1686 aa33.48■■■□□ 2.95
HLA-C-204ENST00000415537 CRKLP46109 303 aaKnown RBP33.48■■■□□ 2.95
HLA-C-204ENST00000415537 TJP1Q07157 1748 aa33.48■■■□□ 2.95
HLA-C-204ENST00000415537 SLC39A6Q13433 755 aa33.47■■■□□ 2.95
HLA-C-204ENST00000415537 GNAT3A8MTJ3 354 aa33.46■■■□□ 2.95
HLA-C-204ENST00000415537 CICQ96RK0 1608 aaPredicted RBP33.46■■■□□ 2.95
HLA-C-204ENST00000415537 NLGN1Q8N2Q7 840 aa33.45■■■□□ 2.95
HLA-C-204ENST00000415537 MMP10P09238 476 aa33.43■■■□□ 2.94
HLA-C-204ENST00000415537 PRKAR2BP31323 418 aa33.43■■■□□ 2.94
HLA-C-204ENST00000415537 GRIN3BO60391 1043 aa33.42■■■□□ 2.94
HLA-C-204ENST00000415537 U2AF1L5P0DN76 240 aaPredicted RBP33.42■■■□□ 2.94
HLA-C-204ENST00000415537 U2AF1Q01081 240 aaKnown RBP eCLIP33.42■■■□□ 2.94
HLA-C-204ENST00000415537 TEFQ10587 303 aa33.42■■■□□ 2.94
HLA-C-204ENST00000415537 DNAJC10Q8IXB1 793 aa33.41■■■□□ 2.94
HLA-C-204ENST00000415537 RSPH6AQ9H0K4 717 aa33.41■■■□□ 2.94
HLA-C-204ENST00000415537 C4AP0C0L4 1744 aa33.41■■■□□ 2.94
HLA-C-204ENST00000415537 TTC5Q8N0Z6 440 aa33.4■■■□□ 2.94
HLA-C-204ENST00000415537 GYS1P13807 737 aa33.39■■■□□ 2.94
HLA-C-204ENST00000415537 YBX3P16989 372 aaKnown RBP eCLIP33.39■■■□□ 2.94
HLA-C-204ENST00000415537 IL17REQ8NFR9 667 aa33.38■■■□□ 2.93
HLA-C-204ENST00000415537 PHACTR3Q96KR7 559 aa33.38■■■□□ 2.93
HLA-C-204ENST00000415537 CCDC87Q9NVE4 849 aa33.38■■■□□ 2.93
HLA-C-204ENST00000415537 KCPQ6ZWJ8 1503 aa33.38■■■□□ 2.93
HLA-C-204ENST00000415537 INTS5Q6P9B9 1019 aaKnown RBP33.37■■■□□ 2.93
HLA-C-204ENST00000415537 GOLGB1Q14789 3259 aaKnown RBP33.36■■■□□ 2.93
HLA-C-204ENST00000415537 VSIG10Q8N0Z9 540 aa33.36■■■□□ 2.93
HLA-C-204ENST00000415537 FCHSD2O94868 740 aa33.35■■■□□ 2.93
HLA-C-204ENST00000415537 UBR2Q8IWV8 1755 aa33.34■■■□□ 2.93
HLA-C-204ENST00000415537 CYP19A1P11511 503 aaPredicted RBP33.34■■■□□ 2.93
HLA-C-204ENST00000415537 ZNF784Q8NCA9 323 aaPredicted RBP33.34■■■□□ 2.93
HLA-C-204ENST00000415537 PARP3Q9Y6F1 533 aa33.34■■■□□ 2.93
HLA-C-204ENST00000415537 SIPA1L3O60292 1781 aaPredicted RBP33.32■■■□□ 2.92
HLA-C-204ENST00000415537 SRP68Q9UHB9 627 aaKnown RBP33.32■■■□□ 2.92
HLA-C-204ENST00000415537 USP42Q9H9J4 1324 aaKnown RBP33.31■■■□□ 2.92
HLA-C-204ENST00000415537 ZPR1O75312 459 aa33.3■■■□□ 2.92
HLA-C-204ENST00000415537 ZNF790Q6PG37 636 aa33.3■■■□□ 2.92
HLA-C-204ENST00000415537 RTF1Q92541 710 aaKnown RBP33.3■■■□□ 2.92
HLA-C-204ENST00000415537 KIF13BQ9NQT8 1826 aa33.3■■■□□ 2.92
HLA-C-204ENST00000415537 SOS1Q07889 1333 aaPredicted RBP33.28■■■□□ 2.92
HLA-C-204ENST00000415537 STARD3NLO95772 234 aa33.28■■■□□ 2.92
HLA-C-204ENST00000415537 WWC3Q9ULE0 1092 aa33.28■■■□□ 2.92
HLA-C-204ENST00000415537 CEMIPQ8WUJ3 1361 aa33.28■■■□□ 2.92
HLA-C-204ENST00000415537 NEFMP07197 916 aa33.27■■■□□ 2.92
HLA-C-204ENST00000415537 ZBTB1Q9Y2K1 713 aa33.27■■■□□ 2.92
HLA-C-204ENST00000415537 TGFB2P61812 414 aa33.26■■■□□ 2.91
HLA-C-204ENST00000415537 FKBP8Q14318 412 aa33.26■■■□□ 2.91
HLA-C-204ENST00000415537 ZNF496Q96IT1 587 aaPredicted RBP33.26■■■□□ 2.91
HLA-C-204ENST00000415537 BTBD11A6QL63 1104 aa33.25■■■□□ 2.91
HLA-C-204ENST00000415537 TEX13AQ9BXU3 409 aaPredicted RBP33.25■■■□□ 2.91
HLA-C-204ENST00000415537 COL15A1P39059 1388 aa33.24■■■□□ 2.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms