RNA–Protein interactions for RNA: ENST00000415298.5

AP1S3-205, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best)

Gene AP1S3, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-205ENST00000415298 IL13P35225 146 aa25.16■■□□□ 1.62
AP1S3-205ENST00000415298 EIF4A2Q14240 407 aaKnown RBP25.16■■□□□ 1.62
AP1S3-205ENST00000415298 LTV1Q96GA3 475 aaPredicted RBP25.16■■□□□ 1.62
AP1S3-205ENST00000415298 COL16A1Q07092 1604 aaPredicted RBP25.15■■□□□ 1.62
AP1S3-205ENST00000415298 U2AF1L5P0DN76 240 aaPredicted RBP25.15■■□□□ 1.62
AP1S3-205ENST00000415298 U2AF1Q01081 240 aaKnown RBP eCLIP25.15■■□□□ 1.62
AP1S3-205ENST00000415298 INSRP06213 1382 aa25.15■■□□□ 1.62
AP1S3-205ENST00000415298 CCDC146Q8IYE0 955 aa25.15■■□□□ 1.62
AP1S3-205ENST00000415298 NOL7Q9UMY1 257 aaKnown RBP25.15■■□□□ 1.62
AP1S3-205ENST00000415298 PHRF1Q9P1Y6 1649 aaKnown RBP25.15■■□□□ 1.62
AP1S3-205ENST00000415298 KDM2BQ8NHM5 1336 aa25.15■■□□□ 1.62
AP1S3-205ENST00000415298 CRYBG1Q9Y4K1 1723 aa25.14■■□□□ 1.62
AP1S3-205ENST00000415298 FLT4P35916 1363 aa25.14■■□□□ 1.62
AP1S3-205ENST00000415298 GAS2L3Q86XJ1 694 aa25.13■■□□□ 1.61
AP1S3-205ENST00000415298 DDX11L8A8MPP1 907 aa25.13■■□□□ 1.61
AP1S3-205ENST00000415298 IP6K1Q92551 441 aa25.13■■□□□ 1.61
AP1S3-205ENST00000415298 KIAA0232Q92628 1395 aa25.13■■□□□ 1.61
AP1S3-205ENST00000415298 CENPQQ7L2Z9 268 aaPredicted RBP25.12■■□□□ 1.61
AP1S3-205ENST00000415298 HMOX1P09601 288 aa25.11■■□□□ 1.61
AP1S3-205ENST00000415298 FBXO3Q9UK99 471 aa25.11■■□□□ 1.61
AP1S3-205ENST00000415298 CCDC66A2RUB6 948 aa25.1■■□□□ 1.61
AP1S3-205ENST00000415298 HSPA1LP34931 641 aa25.1■■□□□ 1.61
AP1S3-205ENST00000415298 TSPYL1Q9H0U9 437 aa25.1■■□□□ 1.61
AP1S3-205ENST00000415298 CHMP4CQ96CF2 233 aa25.09■■□□□ 1.61
AP1S3-205ENST00000415298 TIGD1Q96MW7 591 aa25.08■■□□□ 1.61
AP1S3-205ENST00000415298 ZNF710Q8N1W2 664 aa25.07■■□□□ 1.6
AP1S3-205ENST00000415298 MYRIPQ8NFW9 859 aa25.07■■□□□ 1.6
AP1S3-205ENST00000415298 RGPD5Q99666 1765 aa25.07■■□□□ 1.6
AP1S3-205ENST00000415298 NUTM2BA6NNL0 878 aaPredicted RBP25.07■■□□□ 1.6
AP1S3-205ENST00000415298 NUTM2EB1AL46 878 aaPredicted RBP25.07■■□□□ 1.6
AP1S3-205ENST00000415298 TRIM6-TRIM34B2RNG4 842 aa25.07■■□□□ 1.6
AP1S3-205ENST00000415298 TULP2O00295 520 aa25.07■■□□□ 1.6
AP1S3-205ENST00000415298 NUTM2AQ8IVF1 878 aaPredicted RBP25.07■■□□□ 1.6
AP1S3-205ENST00000415298 TRIM34Q9BYJ4 488 aa25.07■■□□□ 1.6
AP1S3-205ENST00000415298 ABCA3Q99758 1704 aa25.06■■□□□ 1.6
AP1S3-205ENST00000415298 NASPP49321 788 aaPredicted RBP25.06■■□□□ 1.6
AP1S3-205ENST00000415298 PRDM11Q9NQV5 511 aa25.06■■□□□ 1.6
AP1S3-205ENST00000415298 EYA1Q99502 592 aa25.06■■□□□ 1.6
AP1S3-205ENST00000415298 VIRMAQ69YN4 1812 aaKnown RBP25.05■■□□□ 1.6
AP1S3-205ENST00000415298 FAM83GA6ND36 823 aa25.05■■□□□ 1.6
AP1S3-205ENST00000415298 TMED8Q6PL24 325 aaPredicted RBP25.05■■□□□ 1.6
AP1S3-205ENST00000415298 KIF24Q5T7B8 1368 aa25.05■■□□□ 1.6
AP1S3-205ENST00000415298 MCM5P33992 734 aa25.04■■□□□ 1.6
AP1S3-205ENST00000415298 RTL1A6NKG5 1358 aa25.04■■□□□ 1.6
AP1S3-205ENST00000415298 IGSF3O75054 1194 aa25.04■■□□□ 1.6
AP1S3-205ENST00000415298 ADAMTS2O95450 1211 aa25.04■■□□□ 1.6
AP1S3-205ENST00000415298 SULT6B1Q6IMI4 303 aa25.03■■□□□ 1.6
AP1S3-205ENST00000415298 USHBP1Q8N6Y0 703 aa25.03■■□□□ 1.6
AP1S3-205ENST00000415298 KIF3AQ9Y496 699 aa25.03■■□□□ 1.6
AP1S3-205ENST00000415298 CPDO75976 1380 aa25.03■■□□□ 1.6
AP1S3-205ENST00000415298 ANKRD24Q8TF21 1146 aa25.02■■□□□ 1.6
AP1S3-205ENST00000415298 EIF2AK3Q9NZJ5 1116 aaKnown RBP25.02■■□□□ 1.6
AP1S3-205ENST00000415298 APAF1O14727 1248 aa25.02■■□□□ 1.6
AP1S3-205ENST00000415298 NBPF6Q5VWK0 638 aa25.02■■□□□ 1.6
AP1S3-205ENST00000415298 NBPF4Q96M43 638 aa25.02■■□□□ 1.6
AP1S3-205ENST00000415298 CHMP5Q9NZZ3 219 aa25.02■■□□□ 1.6
AP1S3-205ENST00000415298 COL18A1P39060 1754 aa25.01■■□□□ 1.59
AP1S3-205ENST00000415298 BLMP54132 1417 aaPredicted RBP25.01■■□□□ 1.59
AP1S3-205ENST00000415298 CAPN2P17655 700 aa25.01■■□□□ 1.59
AP1S3-205ENST00000415298 CRBNQ96SW2 442 aa25.01■■□□□ 1.59
AP1S3-205ENST00000415298 ZBTB9Q96C00 473 aa25.01■■□□□ 1.59
AP1S3-205ENST00000415298 PLEKHF1Q96S99 279 aa25.01■■□□□ 1.59
AP1S3-205ENST00000415298 EFCC1Q9HA90 598 aa25.01■■□□□ 1.59
AP1S3-205ENST00000415298 COL22A1Q8NFW1 1626 aaPredicted RBP25■■□□□ 1.59
AP1S3-205ENST00000415298 CARD10Q9BWT7 1032 aa25■■□□□ 1.59
AP1S3-205ENST00000415298 PRKAR2BP31323 418 aa25■■□□□ 1.59
AP1S3-205ENST00000415298 PHF14O94880 888 aa24.99■■□□□ 1.59
AP1S3-205ENST00000415298 GABPB1Q06547 395 aaPredicted RBP24.99■■□□□ 1.59
AP1S3-205ENST00000415298 RRP7AQ9Y3A4 280 aaKnown RBP24.99■■□□□ 1.59
AP1S3-205ENST00000415298 RGPD2P0DJD1 1756 aa24.99■■□□□ 1.59
AP1S3-205ENST00000415298 PHACTR3Q96KR7 559 aa24.99■■□□□ 1.59
AP1S3-205ENST00000415298 ERBB3P21860 1342 aa24.98■■□□□ 1.59
AP1S3-205ENST00000415298 ZKSCAN5Q9Y2L8 839 aa24.98■■□□□ 1.59
AP1S3-205ENST00000415298 CAMTA1Q9Y6Y1 1673 aa24.98■■□□□ 1.59
AP1S3-205ENST00000415298 FCHSD2O94868 740 aa24.97■■□□□ 1.59
AP1S3-205ENST00000415298 NEUROD2Q15784 382 aa24.97■■□□□ 1.59
AP1S3-205ENST00000415298 RUNDC1Q96C34 613 aa24.97■■□□□ 1.59
AP1S3-205ENST00000415298 SPDYE4A6NLX3 237 aa24.97■■□□□ 1.59
AP1S3-205ENST00000415298 GTF2F1P35269 517 aaKnown RBP eCLIP24.97■■□□□ 1.59
AP1S3-205ENST00000415298 JCADQ9P266 1359 aa24.97■■□□□ 1.59
AP1S3-205ENST00000415298 TICAM2Q86XR7 235 aa24.96■■□□□ 1.59
AP1S3-205ENST00000415298 IGSF1Q8N6C5 1336 aa24.96■■□□□ 1.59
AP1S3-205ENST00000415298 TCP11L2Q8N4U5 519 aa24.96■■□□□ 1.59
AP1S3-205ENST00000415298 TBC1D2Q9BYX2 928 aa24.96■■□□□ 1.59
AP1S3-205ENST00000415298 RGPD1P0DJD0 1748 aa24.96■■□□□ 1.59
AP1S3-205ENST00000415298 SKOR2Q2VWA4 1001 aaPredicted RBP24.94■■□□□ 1.58
AP1S3-205ENST00000415298 BTG4Q9NY30 223 aa24.94■■□□□ 1.58
AP1S3-205ENST00000415298 CSB-PGBD3P0DP91 1061 aa24.94■■□□□ 1.58
AP1S3-205ENST00000415298 STRN4Q9NRL3 753 aa24.94■■□□□ 1.58
AP1S3-205ENST00000415298 PRR29P0C7W0 189 aa24.93■■□□□ 1.58
AP1S3-205ENST00000415298 PRIMPOLQ96LW4 560 aa24.93■■□□□ 1.58
AP1S3-205ENST00000415298 LOC102724159A0A0B4J2E5 919 aa24.92■■□□□ 1.58
AP1S3-205ENST00000415298 MCCP23508 829 aa24.92■■□□□ 1.58
AP1S3-205ENST00000415298 PWP2Q15269 919 aaKnown RBP24.92■■□□□ 1.58
AP1S3-205ENST00000415298 NLRP2Q9NX02 1062 aa24.92■■□□□ 1.58
AP1S3-205ENST00000415298 HMGN5P82970 282 aaKnown RBP24.91■■□□□ 1.58
AP1S3-205ENST00000415298 CALCOCO1Q9P1Z2 691 aa24.91■■□□□ 1.58
AP1S3-205ENST00000415298 FEZ1Q99689 392 aa24.91■■□□□ 1.58
AP1S3-205ENST00000415298 LMO7Q8WWI1 1683 aa24.91■■□□□ 1.58
AP1S3-205ENST00000415298 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP24.9■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms