RNA–Protein interactions for RNA: ENST00000414785.5

PLOD3-202, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-202ENST00000414785 WASHC2AQ641Q2 1341 aa23.17■■□□□ 1.3
PLOD3-202ENST00000414785 SLC4A9Q96Q91 983 aa23.17■■□□□ 1.3
PLOD3-202ENST00000414785 KDRP35968 1356 aa23.15■■□□□ 1.3
PLOD3-202ENST00000414785 A0A0G2JLW4 131 aa23.15■■□□□ 1.3
PLOD3-202ENST00000414785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.15■■□□□ 1.3
PLOD3-202ENST00000414785 IFNL2Q8IZJ0 200 aa23.14■■□□□ 1.29
PLOD3-202ENST00000414785 N4BP2Q86UW6 1770 aaPredicted RBP23.14■■□□□ 1.29
PLOD3-202ENST00000414785 POLKQ9UBT6 870 aa23.13■■□□□ 1.29
PLOD3-202ENST00000414785 BCS1LQ9Y276 419 aa23.13■■□□□ 1.29
PLOD3-202ENST00000414785 KIF13BQ9NQT8 1826 aa23.12■■□□□ 1.29
PLOD3-202ENST00000414785 C10orf71Q711Q0 1435 aa23.12■■□□□ 1.29
PLOD3-202ENST00000414785 CDCA8Q53HL2 280 aa23.11■■□□□ 1.29
PLOD3-202ENST00000414785 DPEP1P16444 411 aa23.1■■□□□ 1.29
PLOD3-202ENST00000414785 EIF4A2Q14240 407 aaKnown RBP23.1■■□□□ 1.29
PLOD3-202ENST00000414785 TRAPPC3LQ5T215 181 aa23.1■■□□□ 1.29
PLOD3-202ENST00000414785 ARHGEF1Q92888 912 aaKnown RBP23.1■■□□□ 1.29
PLOD3-202ENST00000414785 NMRK2Q9NPI5 230 aa23.1■■□□□ 1.29
PLOD3-202ENST00000414785 RTCBQ9Y3I0 505 aaKnown RBP23.1■■□□□ 1.29
PLOD3-202ENST00000414785 TGFB2P61812 414 aa23.09■■□□□ 1.29
PLOD3-202ENST00000414785 DNAJC5GQ8N7S2 189 aa23.09■■□□□ 1.29
PLOD3-202ENST00000414785 GYS1P13807 737 aa23.08■■□□□ 1.29
PLOD3-202ENST00000414785 TNNT2P45379 298 aaPredicted RBP23.08■■□□□ 1.29
PLOD3-202ENST00000414785 ARHGAP27Q6ZUM4 889 aa23.08■■□□□ 1.29
PLOD3-202ENST00000414785 RBM42Q9BTD8 480 aaKnown RBP23.08■■□□□ 1.29
PLOD3-202ENST00000414785 APLP1P51693 650 aa23.07■■□□□ 1.28
PLOD3-202ENST00000414785 NLGN1Q8N2Q7 840 aa23.07■■□□□ 1.28
PLOD3-202ENST00000414785 C4AP0C0L4 1744 aa23.06■■□□□ 1.28
PLOD3-202ENST00000414785 TOMM70O94826 608 aa23.06■■□□□ 1.28
PLOD3-202ENST00000414785 FCHSD2O94868 740 aa23.05■■□□□ 1.28
PLOD3-202ENST00000414785 KCNA3P22001 575 aa23.05■■□□□ 1.28
PLOD3-202ENST00000414785 COL5A3P25940 1745 aaPredicted RBP23.05■■□□□ 1.28
PLOD3-202ENST00000414785 CCDC87Q9NVE4 849 aa23.04■■□□□ 1.28
PLOD3-202ENST00000414785 KDM6AO15550 1401 aaPredicted RBP23.04■■□□□ 1.28
PLOD3-202ENST00000414785 CNTNAP4Q9C0A0 1308 aa23.04■■□□□ 1.28
PLOD3-202ENST00000414785 ERVV-2B6SEH9 535 aa23.03■■□□□ 1.28
PLOD3-202ENST00000414785 RC3H1Q5TC82 1133 aaKnown RBP23.03■■□□□ 1.28
PLOD3-202ENST00000414785 RPS6KA4O75676 772 aa23.02■■□□□ 1.28
PLOD3-202ENST00000414785 RFC4P35249 363 aa23.02■■□□□ 1.28
PLOD3-202ENST00000414785 HTRA3P83110 453 aa23.02■■□□□ 1.28
PLOD3-202ENST00000414785 ZNF831Q5JPB2 1677 aa23.02■■□□□ 1.28
PLOD3-202ENST00000414785 BRCA1P38398 1863 aaKnown RBP23.02■■□□□ 1.28
PLOD3-202ENST00000414785 ADRA2BP18089 450 aa23.01■■□□□ 1.27
PLOD3-202ENST00000414785 C9orf131Q5VYM1 1079 aa23.01■■□□□ 1.27
PLOD3-202ENST00000414785 SRP68Q9UHB9 627 aaKnown RBP23.01■■□□□ 1.27
PLOD3-202ENST00000414785 PARP3Q9Y6F1 533 aa23.01■■□□□ 1.27
PLOD3-202ENST00000414785 MYH14Q7Z406 1995 aaKnown RBP23■■□□□ 1.27
PLOD3-202ENST00000414785 DCAF5Q96JK2 942 aa23■■□□□ 1.27
PLOD3-202ENST00000414785 PTCD1O75127 700 aaKnown RBP22.98■■□□□ 1.27
PLOD3-202ENST00000414785 CABP4P57796 275 aa22.98■■□□□ 1.27
PLOD3-202ENST00000414785 DDR1Q08345 913 aa22.98■■□□□ 1.27
PLOD3-202ENST00000414785 FKBP8Q14318 412 aa22.98■■□□□ 1.27
PLOD3-202ENST00000414785 POLR3GLQ9BT43 218 aa22.98■■□□□ 1.27
PLOD3-202ENST00000414785 ZNF530Q6P9A1 599 aaPredicted RBP22.97■■□□□ 1.27
PLOD3-202ENST00000414785 AEBP1Q8IUX7 1158 aa22.97■■□□□ 1.27
PLOD3-202ENST00000414785 PLEKHG2Q9H7P9 1386 aa22.97■■□□□ 1.27
PLOD3-202ENST00000414785 CRKLP46109 303 aaKnown RBP22.96■■□□□ 1.27
PLOD3-202ENST00000414785 KCPQ6ZWJ8 1503 aa22.96■■□□□ 1.27
PLOD3-202ENST00000414785 PCNTO95613 3336 aa22.95■■□□□ 1.26
PLOD3-202ENST00000414785 HSP90AB1P08238 724 aaKnown RBP22.95■■□□□ 1.26
PLOD3-202ENST00000414785 CHRNA5P30532 468 aa22.95■■□□□ 1.26
PLOD3-202ENST00000414785 PLEKHO1Q53GL0 409 aaPredicted RBP22.95■■□□□ 1.26
PLOD3-202ENST00000414785 RBM46Q8TBY0 533 aaKnown RBP22.95■■□□□ 1.26
PLOD3-202ENST00000414785 WDR90Q96KV7 1748 aa22.95■■□□□ 1.26
PLOD3-202ENST00000414785 PIM2Q9P1W9 311 aa22.95■■□□□ 1.26
PLOD3-202ENST00000414785 USP42Q9H9J4 1324 aaKnown RBP22.93■■□□□ 1.26
PLOD3-202ENST00000414785 NFATC2IPQ8NCF5 419 aa22.93■■□□□ 1.26
PLOD3-202ENST00000414785 ARFGEF1Q9Y6D6 1849 aa22.93■■□□□ 1.26
PLOD3-202ENST00000414785 TJP1Q07157 1748 aa22.92■■□□□ 1.26
PLOD3-202ENST00000414785 MTHFSP49914 203 aa22.92■■□□□ 1.26
PLOD3-202ENST00000414785 DALRD3Q5D0E6 543 aaKnown RBP22.92■■□□□ 1.26
PLOD3-202ENST00000414785 RNF181Q9P0P0 153 aa22.92■■□□□ 1.26
PLOD3-202ENST00000414785 INTS5Q6P9B9 1019 aaKnown RBP22.91■■□□□ 1.26
PLOD3-202ENST00000414785 AMOTQ4VCS5 1084 aa22.9■■□□□ 1.26
PLOD3-202ENST00000414785 C16orf71Q8IYS4 520 aaPredicted RBP22.9■■□□□ 1.26
PLOD3-202ENST00000414785 KLRG1Q96E93 195 aa22.9■■□□□ 1.26
PLOD3-202ENST00000414785 RRAGCQ9HB90 399 aa22.9■■□□□ 1.26
PLOD3-202ENST00000414785 ADAMTS7Q9UKP4 1686 aa22.9■■□□□ 1.26
PLOD3-202ENST00000414785 POLRMTO00411 1230 aaKnown RBP22.89■■□□□ 1.25
PLOD3-202ENST00000414785 TRIM26Q12899 539 aaPredicted RBP22.89■■□□□ 1.25
PLOD3-202ENST00000414785 COL13A1Q5TAT6 717 aaPredicted RBP22.88■■□□□ 1.25
PLOD3-202ENST00000414785 TM4SF1P30408 202 aa22.87■■□□□ 1.25
PLOD3-202ENST00000414785 FSTL1Q12841 308 aa22.87■■□□□ 1.25
PLOD3-202ENST00000414785 C1orf141Q5JVX7 400 aa22.87■■□□□ 1.25
PLOD3-202ENST00000414785 PANK3Q9H999 370 aa22.87■■□□□ 1.25
PLOD3-202ENST00000414785 KDM2BQ8NHM5 1336 aa22.86■■□□□ 1.25
PLOD3-202ENST00000414785 RASSF7Q02833 373 aa22.86■■□□□ 1.25
PLOD3-202ENST00000414785 SULT6B1Q6IMI4 303 aa22.86■■□□□ 1.25
PLOD3-202ENST00000414785 JMYQ8N9B5 988 aa22.86■■□□□ 1.25
PLOD3-202ENST00000414785 PRELPP51888 382 aa22.85■■□□□ 1.25
PLOD3-202ENST00000414785 DNAJC10Q8IXB1 793 aa22.85■■□□□ 1.25
PLOD3-202ENST00000414785 USPL1Q5W0Q7 1092 aa22.84■■□□□ 1.25
PLOD3-202ENST00000414785 SOS1Q07889 1333 aaPredicted RBP22.82■■□□□ 1.24
PLOD3-202ENST00000414785 SBF1O95248 1867 aa22.82■■□□□ 1.24
PLOD3-202ENST00000414785 LGR6Q9HBX8 967 aa22.81■■□□□ 1.24
PLOD3-202ENST00000414785 TNRC6CQ9HCJ0 1690 aaKnown RBP22.81■■□□□ 1.24
PLOD3-202ENST00000414785 IL13P35225 146 aa22.8■■□□□ 1.24
PLOD3-202ENST00000414785 SLC39A6Q13433 755 aa22.8■■□□□ 1.24
PLOD3-202ENST00000414785 NFIXQ14938 502 aa22.8■■□□□ 1.24
PLOD3-202ENST00000414785 SCN11AQ9UI33 1791 aa22.79■■□□□ 1.24
PLOD3-202ENST00000414785 ZPR1O75312 459 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms