RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 SIK1P57059 783 aa18.98■□□□□ 0.63
RAPGEF1-204ENST00000414781 TMC1Q8TDI8 760 aa18.98■□□□□ 0.63
RAPGEF1-204ENST00000414781 DCAF5Q96JK2 942 aa18.98■□□□□ 0.63
RAPGEF1-204ENST00000414781 PIM2Q9P1W9 311 aa18.98■□□□□ 0.63
RAPGEF1-204ENST00000414781 TONSLQ96HA7 1378 aa18.97■□□□□ 0.63
RAPGEF1-204ENST00000414781 N4BP2Q86UW6 1770 aaPredicted RBP18.97■□□□□ 0.63
RAPGEF1-204ENST00000414781 TMF1P82094 1093 aa18.97■□□□□ 0.63
RAPGEF1-204ENST00000414781 NBPF6Q5VWK0 638 aa18.97■□□□□ 0.63
RAPGEF1-204ENST00000414781 NBPF4Q96M43 638 aa18.97■□□□□ 0.63
RAPGEF1-204ENST00000414781 PRDM10Q9NQV6 1147 aa18.97■□□□□ 0.63
RAPGEF1-204ENST00000414781 DALRD3Q5D0E6 543 aaKnown RBP18.96■□□□□ 0.63
RAPGEF1-204ENST00000414781 COG3Q96JB2 828 aa18.96■□□□□ 0.63
RAPGEF1-204ENST00000414781 ROCK2O75116 1388 aaKnown RBP18.95■□□□□ 0.62
RAPGEF1-204ENST00000414781 VEGFAP15692 232 aaPredicted RBP18.95■□□□□ 0.62
RAPGEF1-204ENST00000414781 PIGBQ92521 554 aa18.95■□□□□ 0.62
RAPGEF1-204ENST00000414781 A0A1W2PP64 1363 aa18.94■□□□□ 0.62
RAPGEF1-204ENST00000414781 PARP3Q9Y6F1 533 aa18.94■□□□□ 0.62
RAPGEF1-204ENST00000414781 ARFGEF1Q9Y6D6 1849 aa18.93■□□□□ 0.62
RAPGEF1-204ENST00000414781 CYP27B1O15528 508 aa18.93■□□□□ 0.62
RAPGEF1-204ENST00000414781 ADRA2BP18089 450 aa18.93■□□□□ 0.62
RAPGEF1-204ENST00000414781 KCNA3P22001 575 aa18.93■□□□□ 0.62
RAPGEF1-204ENST00000414781 TRAPPC3LQ5T215 181 aa18.93■□□□□ 0.62
RAPGEF1-204ENST00000414781 USHBP1Q8N6Y0 703 aa18.93■□□□□ 0.62
RAPGEF1-204ENST00000414781 SLC12A5Q9H2X9 1139 aa18.92■□□□□ 0.62
RAPGEF1-204ENST00000414781 RTCBQ9Y3I0 505 aaKnown RBP18.92■□□□□ 0.62
RAPGEF1-204ENST00000414781 BRCA1P38398 1863 aaKnown RBP18.92■□□□□ 0.62
RAPGEF1-204ENST00000414781 C4AP0C0L4 1744 aa18.91■□□□□ 0.62
RAPGEF1-204ENST00000414781 ATP6V1AP38606 617 aa18.91■□□□□ 0.62
RAPGEF1-204ENST00000414781 ITPK1Q13572 414 aa18.91■□□□□ 0.62
RAPGEF1-204ENST00000414781 GLTPD2A6NH11 291 aa18.9■□□□□ 0.62
RAPGEF1-204ENST00000414781 NKX1-1Q15270 411 aaPredicted RBP18.9■□□□□ 0.62
RAPGEF1-204ENST00000414781 CREBZFQ9NS37 354 aa18.9■□□□□ 0.62
RAPGEF1-204ENST00000414781 MAP2P11137 1827 aaKnown RBP18.9■□□□□ 0.62
RAPGEF1-204ENST00000414781 RGPD2P0DJD1 1756 aa18.89■□□□□ 0.61
RAPGEF1-204ENST00000414781 CTCFP49711 727 aaPredicted RBP18.89■□□□□ 0.61
RAPGEF1-204ENST00000414781 FAM161AQ3B820 660 aa18.89■□□□□ 0.61
RAPGEF1-204ENST00000414781 TMOD3Q9NYL9 352 aa18.89■□□□□ 0.61
RAPGEF1-204ENST00000414781 FOXN1O15353 648 aa18.88■□□□□ 0.61
RAPGEF1-204ENST00000414781 L3MBTL2Q969R5 705 aa18.88■□□□□ 0.61
RAPGEF1-204ENST00000414781 AIDAQ96BJ3 306 aa18.88■□□□□ 0.61
RAPGEF1-204ENST00000414781 PUS7Q96PZ0 661 aaKnown RBP18.88■□□□□ 0.61
RAPGEF1-204ENST00000414781 KDM6AO15550 1401 aaPredicted RBP18.88■□□□□ 0.61
RAPGEF1-204ENST00000414781 GYS1P13807 737 aa18.87■□□□□ 0.61
RAPGEF1-204ENST00000414781 ITGB4P16144 1822 aa18.86■□□□□ 0.61
RAPGEF1-204ENST00000414781 RFC4P35249 363 aa18.86■□□□□ 0.61
RAPGEF1-204ENST00000414781 INSRP06213 1382 aa18.85■□□□□ 0.61
RAPGEF1-204ENST00000414781 LMNB1P20700 586 aa18.85■□□□□ 0.61
RAPGEF1-204ENST00000414781 RC3H1Q5TC82 1133 aaKnown RBP18.85■□□□□ 0.61
RAPGEF1-204ENST00000414781 ARHGEF1Q92888 912 aaKnown RBP18.85■□□□□ 0.61
RAPGEF1-204ENST00000414781 ASAP1Q9ULH1 1129 aa18.85■□□□□ 0.61
RAPGEF1-204ENST00000414781 MKRN1Q9UHC7 482 aaKnown RBP18.84■□□□□ 0.61
RAPGEF1-204ENST00000414781 SPG7Q9UQ90 795 aa18.84■□□□□ 0.61
RAPGEF1-204ENST00000414781 FBLN1P23142 703 aa18.83■□□□□ 0.6
RAPGEF1-204ENST00000414781 RRS1Q15050 365 aaKnown RBP18.83■□□□□ 0.6
RAPGEF1-204ENST00000414781 KDRP35968 1356 aa18.82■□□□□ 0.6
RAPGEF1-204ENST00000414781 CNTNAP1P78357 1384 aa18.82■□□□□ 0.6
RAPGEF1-204ENST00000414781 KIF24Q5T7B8 1368 aa18.82■□□□□ 0.6
RAPGEF1-204ENST00000414781 CNTNAP4Q9C0A0 1308 aa18.82■□□□□ 0.6
RAPGEF1-204ENST00000414781 ABHD8Q96I13 439 aa18.82■□□□□ 0.6
RAPGEF1-204ENST00000414781 RPS6KA4O75676 772 aa18.81■□□□□ 0.6
RAPGEF1-204ENST00000414781 MLLT1Q03111 559 aaPredicted RBP18.81■□□□□ 0.6
RAPGEF1-204ENST00000414781 FLT4P35916 1363 aa18.81■□□□□ 0.6
RAPGEF1-204ENST00000414781 RASSF7Q02833 373 aa18.8■□□□□ 0.6
RAPGEF1-204ENST00000414781 ATG3Q9NT62 314 aa18.8■□□□□ 0.6
RAPGEF1-204ENST00000414781 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.8■□□□□ 0.6
RAPGEF1-204ENST00000414781 CHRNA5P30532 468 aa18.79■□□□□ 0.6
RAPGEF1-204ENST00000414781 CHADLQ6NUI6 762 aa18.79■□□□□ 0.6
RAPGEF1-204ENST00000414781 SBF1O95248 1867 aa18.79■□□□□ 0.6
RAPGEF1-204ENST00000414781 HSP90AB2PQ58FF8 381 aa18.78■□□□□ 0.6
RAPGEF1-204ENST00000414781 DPY19L2Q6NUT2 758 aa18.78■□□□□ 0.6
RAPGEF1-204ENST00000414781 ZNF831Q5JPB2 1677 aa18.77■□□□□ 0.6
RAPGEF1-204ENST00000414781 NCAPD2Q15021 1401 aa18.76■□□□□ 0.59
RAPGEF1-204ENST00000414781 RGS19P49795 217 aa18.76■□□□□ 0.59
RAPGEF1-204ENST00000414781 DDR1Q08345 913 aa18.76■□□□□ 0.59
RAPGEF1-204ENST00000414781 POTECB2RU33 542 aa18.75■□□□□ 0.59
RAPGEF1-204ENST00000414781 LBX1P52954 281 aa18.75■□□□□ 0.59
RAPGEF1-204ENST00000414781 IFNL2Q8IZJ0 200 aa18.75■□□□□ 0.59
RAPGEF1-204ENST00000414781 WBP1LQ9NX94 342 aa18.75■□□□□ 0.59
RAPGEF1-204ENST00000414781 USP42Q9H9J4 1324 aaKnown RBP18.74■□□□□ 0.59
RAPGEF1-204ENST00000414781 FKBP8Q14318 412 aa18.73■□□□□ 0.59
RAPGEF1-204ENST00000414781 SLC4A9Q96Q91 983 aa18.73■□□□□ 0.59
RAPGEF1-204ENST00000414781 RBM42Q9BTD8 480 aaKnown RBP18.73■□□□□ 0.59
RAPGEF1-204ENST00000414781 PHKG2P15735 406 aa18.72■□□□□ 0.59
RAPGEF1-204ENST00000414781 CARD11Q9BXL7 1154 aa18.72■□□□□ 0.59
RAPGEF1-204ENST00000414781 POLRMTO00411 1230 aaKnown RBP18.71■□□□□ 0.59
RAPGEF1-204ENST00000414781 VEGFBP49765 207 aa18.71■□□□□ 0.59
RAPGEF1-204ENST00000414781 TIAM2Q8IVF5 1701 aa18.71■□□□□ 0.59
RAPGEF1-204ENST00000414781 FYB1O15117 783 aa18.7■□□□□ 0.58
RAPGEF1-204ENST00000414781 HSPA8P11142 646 aaKnown RBP18.7■□□□□ 0.58
RAPGEF1-204ENST00000414781 TTLL6Q8N841 843 aa18.7■□□□□ 0.58
RAPGEF1-204ENST00000414781 GGNBP2Q9H3C7 697 aa18.7■□□□□ 0.58
RAPGEF1-204ENST00000414781 PASKQ96RG2 1323 aa18.7■□□□□ 0.58
RAPGEF1-204ENST00000414781 COL5A3P25940 1745 aaPredicted RBP18.69■□□□□ 0.58
RAPGEF1-204ENST00000414781 ERVV-2B6SEH9 535 aa18.69■□□□□ 0.58
RAPGEF1-204ENST00000414781 SRP68Q9UHB9 627 aaKnown RBP18.69■□□□□ 0.58
RAPGEF1-204ENST00000414781 CCDC85CA6NKD9 419 aa18.68■□□□□ 0.58
RAPGEF1-204ENST00000414781 TMEM88BA6NKF7 163 aa18.68■□□□□ 0.58
RAPGEF1-204ENST00000414781 NFKBIEO00221 500 aa18.68■□□□□ 0.58
RAPGEF1-204ENST00000414781 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
RAPGEF1-204ENST00000414781 TM4SF1P30408 202 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms