RNA–Protein interactions for RNA: ENST00000414600.1

SOX9-AS1-202, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 742 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-202ENST00000414600 SWAP70Q9UH65 585 aa9.6□□□□□ -0.87
SOX9-AS1-202ENST00000414600 COL4A3BPQ9Y5P4 624 aa9.6□□□□□ -0.87
SOX9-AS1-202ENST00000414600 PPEF1O14829 653 aaPredicted RBP9.59□□□□□ -0.87
SOX9-AS1-202ENST00000414600 TBX4P57082 545 aa9.59□□□□□ -0.87
SOX9-AS1-202ENST00000414600 HDLBPQ00341 1268 aaKnown RBP9.59□□□□□ -0.87
SOX9-AS1-202ENST00000414600 PHLDB3Q6NSJ2 640 aa9.59□□□□□ -0.87
SOX9-AS1-202ENST00000414600 CXorf38Q8TB03 319 aa9.59□□□□□ -0.87
SOX9-AS1-202ENST00000414600 RPS6KC1Q96S38 1066 aa9.59□□□□□ -0.87
SOX9-AS1-202ENST00000414600 FBXO9Q9UK97 447 aaPredicted RBP9.59□□□□□ -0.87
SOX9-AS1-202ENST00000414600 ERCC6L2Q5T890 1561 aa9.58□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ATP2B1P20020 1258 aa9.58□□□□□ -0.88
SOX9-AS1-202ENST00000414600 SLC43A3Q8NBI5 491 aa9.58□□□□□ -0.88
SOX9-AS1-202ENST00000414600 QTRT2Q9H974 415 aaKnown RBP9.58□□□□□ -0.88
SOX9-AS1-202ENST00000414600 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.58□□□□□ -0.88
SOX9-AS1-202ENST00000414600 WWC3Q9ULE0 1092 aa9.58□□□□□ -0.88
SOX9-AS1-202ENST00000414600 TBC1D2BQ9UPU7 963 aa9.58□□□□□ -0.88
SOX9-AS1-202ENST00000414600 GRIN2AQ12879 1464 aa9.58□□□□□ -0.88
SOX9-AS1-202ENST00000414600 NUTM2FA1L443 756 aa9.57□□□□□ -0.88
SOX9-AS1-202ENST00000414600 SPDYE16A6NNV3 312 aaPredicted RBP9.57□□□□□ -0.88
SOX9-AS1-202ENST00000414600 HIC1Q14526 733 aa9.57□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ZNF280DQ6N043 979 aa9.57□□□□□ -0.88
SOX9-AS1-202ENST00000414600 NUDT18Q6ZVK8 323 aa9.57□□□□□ -0.88
SOX9-AS1-202ENST00000414600 TINF2Q9BSI4 451 aa9.57□□□□□ -0.88
SOX9-AS1-202ENST00000414600 TRIM34Q9BYJ4 488 aa9.57□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ADAMTS12P58397 1594 aa9.57□□□□□ -0.88
SOX9-AS1-202ENST00000414600 CEP170Q5SW79 1584 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 EPB41L2O43491 1005 aaKnown RBP9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ZNF500O60304 480 aaPredicted RBP9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ZRANB2O95218 330 aaKnown RBP eCLIP9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 FECHP22830 423 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 HSD3B2P26439 372 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 COPB2P35606 906 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 TAGLNQ01995 201 aaKnown RBP9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 RAD51AP2Q09MP3 1159 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 LCE2CQ5TA81 110 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 SLF2Q8IX21 1173 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 CERKQ8TCT0 537 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 PCDH12Q9NPG4 1184 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 PCDHB3Q9Y5E6 796 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 FHAD1B1AJZ9 1412 aa9.56□□□□□ -0.88
SOX9-AS1-202ENST00000414600 FAM181BA6NEQ2 426 aa9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 SCAMP3O14828 347 aaKnown RBP9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 AXIN1O15169 862 aa9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 SUZ12Q15022 739 aaKnown RBP9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 CDCA8Q53HL2 280 aa9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ZNF746Q6NUN9 644 aaPredicted RBP9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ZNF622Q969S3 477 aaKnown RBP eCLIP9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 BACH2Q9BYV9 841 aa9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 SPC25Q9HBM1 224 aa9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 NLRP2Q9NX02 1062 aa9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 PRR12Q9ULL5 1215 aa9.55□□□□□ -0.88
SOX9-AS1-202ENST00000414600 IGF1RP08069 1367 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 CCDC189A1A4V9 331 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 CFAP69A5D8W1 941 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 SSFA2P28290 1259 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 GTF2F1P35269 517 aaKnown RBP eCLIP9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 PDIA6Q15084 440 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 SWT1Q5T5J6 900 aaKnown RBP9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 BLOC1S3Q6QNY0 202 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 RPUSD2Q8IZ73 545 aaKnown RBP9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ZSWIM4Q9H7M6 989 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ARHGEF10LQ9HCE6 1279 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 GEMIN8Q9NWZ8 242 aaKnown RBP9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 G3BP2Q9UN86 482 aaKnown RBP9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 NUP160Q12769 1436 aa9.54□□□□□ -0.88
SOX9-AS1-202ENST00000414600 ERICH3Q5RHP9 1530 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 CLGNO14967 610 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 TLL1O43897 1013 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 S1PR4O95977 384 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 S100BP04271 92 aaPredicted RBP9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 HSP90AA1P07900 732 aaKnown RBP9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 RBL2Q08999 1139 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 C9orf131Q5VYM1 1079 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 PPP2R2DQ66LE6 453 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 CASC1Q6TDU7 716 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 PCGF5Q86SE9 256 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 JAZF1Q86VZ6 243 aa9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 PPARGC1BQ86YN6 1023 aaKnown RBP9.53□□□□□ -0.88
SOX9-AS1-202ENST00000414600 TTC36A6NLP5 189 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 TERTO14746 1132 aaKnown RBP9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 PRC1O43663 620 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 AVPP01185 164 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 CLCN1P35523 988 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 CLK2P49760 499 aaKnown RBP9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 EVA1CP58658 441 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 FOXC1Q12948 553 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 MYSM1Q5VVJ2 828 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 FBXO31Q5XUX0 539 aaPredicted RBP9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 PRR14Q9BWN1 585 aa9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 IQSEC3Q9UPP2 1182 aaPredicted RBP9.52□□□□□ -0.89
SOX9-AS1-202ENST00000414600 NRDCO43847 1150 aa9.51□□□□□ -0.89
SOX9-AS1-202ENST00000414600 CCDC96Q2M329 555 aa9.51□□□□□ -0.89
SOX9-AS1-202ENST00000414600 FMNL3Q8IVF7 1028 aa9.51□□□□□ -0.89
SOX9-AS1-202ENST00000414600 IFT57Q9NWB7 429 aa9.51□□□□□ -0.89
SOX9-AS1-202ENST00000414600 DDX56Q9NY93 547 aaKnown RBP9.51□□□□□ -0.89
SOX9-AS1-202ENST00000414600 PKD2L1Q9P0L9 805 aa9.51□□□□□ -0.89
SOX9-AS1-202ENST00000414600 TFIP11Q9UBB9 837 aaKnown RBP9.51□□□□□ -0.89
SOX9-AS1-202ENST00000414600 NRBP1Q9UHY1 535 aa9.51□□□□□ -0.89
SOX9-AS1-202ENST00000414600 STK10O94804 968 aaKnown RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms