RNA–Protein interactions for RNA: ENST00000414331.5

PTPA-209, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-209ENST00000414331 ATG3Q9NT62 314 aa21.37■■□□□ 1.01
PTPA-209ENST00000414331 IL13P35225 146 aa21.36■■□□□ 1.01
PTPA-209ENST00000414331 GPR162Q16538 588 aa21.36■■□□□ 1.01
PTPA-209ENST00000414331 LINC00116Q8NCU8 138 aa21.36■■□□□ 1.01
PTPA-209ENST00000414331 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.35■■□□□ 1.01
PTPA-209ENST00000414331 SSFA2P28290 1259 aa21.35■■□□□ 1.01
PTPA-209ENST00000414331 PELP1Q8IZL8 1130 aaKnown RBP21.35■■□□□ 1.01
PTPA-209ENST00000414331 SCN11AQ9UI33 1791 aa21.35■■□□□ 1.01
PTPA-209ENST00000414331 GNPATO15228 680 aa21.34■■□□□ 1.01
PTPA-209ENST00000414331 MTHFSP49914 203 aa21.34■■□□□ 1.01
PTPA-209ENST00000414331 CABP4P57796 275 aa21.34■■□□□ 1.01
PTPA-209ENST00000414331 CC2D1BQ5T0F9 858 aaKnown RBP21.34■■□□□ 1.01
PTPA-209ENST00000414331 COL5A3P25940 1745 aaPredicted RBP21.34■■□□□ 1.01
PTPA-209ENST00000414331 ITPK1Q13572 414 aa21.33■■□□□ 1.01
PTPA-209ENST00000414331 NLGN2Q8NFZ4 835 aa21.33■■□□□ 1.01
PTPA-209ENST00000414331 RBM42Q9BTD8 480 aaKnown RBP21.32■■□□□ 1
PTPA-209ENST00000414331 VIRMAQ69YN4 1812 aaKnown RBP21.32■■□□□ 1
PTPA-209ENST00000414331 PER1O15534 1290 aaPredicted RBP21.31■■□□□ 1
PTPA-209ENST00000414331 AMIGO3Q86WK7 504 aa21.31■■□□□ 1
PTPA-209ENST00000414331 NPC1L1Q9UHC9 1359 aa21.31■■□□□ 1
PTPA-209ENST00000414331 SMIM5Q71RC9 77 aa21.29■■□□□ 1
PTPA-209ENST00000414331 DIAPH1O60610 1272 aaKnown RBP21.28■■□□□ 1
PTPA-209ENST00000414331 CD2APQ9Y5K6 639 aa21.28■■□□□ 1
PTPA-209ENST00000414331 CICQ96RK0 1608 aaPredicted RBP21.27■■□□□ 1
PTPA-209ENST00000414331 HMOX1P09601 288 aa21.27■■□□□ 1
PTPA-209ENST00000414331 CNGB1Q14028 1251 aaPredicted RBP21.27■■□□□ 1
PTPA-209ENST00000414331 AKAP4Q5JQC9 854 aa21.27■■□□□ 1
PTPA-209ENST00000414331 RTCBQ9Y3I0 505 aaKnown RBP21.27■■□□□ 1
PTPA-209ENST00000414331 CNTNAP4Q9C0A0 1308 aa21.27■□□□□ 0.99
PTPA-209ENST00000414331 TJP1Q07157 1748 aa21.26■□□□□ 0.99
PTPA-209ENST00000414331 UTRNP46939 3433 aa21.26■□□□□ 0.99
PTPA-209ENST00000414331 C4AP0C0L4 1744 aa21.25■□□□□ 0.99
PTPA-209ENST00000414331 SLC4A9Q96Q91 983 aa21.25■□□□□ 0.99
PTPA-209ENST00000414331 COL3A1P02461 1466 aaPredicted RBP21.25■□□□□ 0.99
PTPA-209ENST00000414331 MRC1P22897 1456 aa21.25■□□□□ 0.99
PTPA-209ENST00000414331 GRIN3BO60391 1043 aa21.24■□□□□ 0.99
PTPA-209ENST00000414331 RC3H1Q5TC82 1133 aaKnown RBP21.24■□□□□ 0.99
PTPA-209ENST00000414331 ZNF784Q8NCA9 323 aaPredicted RBP21.24■□□□□ 0.99
PTPA-209ENST00000414331 NFATC2IPQ8NCF5 419 aa21.24■□□□□ 0.99
PTPA-209ENST00000414331 MYH14Q7Z406 1995 aaKnown RBP21.23■□□□□ 0.99
PTPA-209ENST00000414331 PTCD1O75127 700 aaKnown RBP21.23■□□□□ 0.99
PTPA-209ENST00000414331 ADRA2BP18089 450 aa21.23■□□□□ 0.99
PTPA-209ENST00000414331 TRAPPC3LQ5T215 181 aa21.23■□□□□ 0.99
PTPA-209ENST00000414331 ADAMTS7Q9UKP4 1686 aa21.21■□□□□ 0.99
PTPA-209ENST00000414331 YBX3P16989 372 aaKnown RBP eCLIP21.21■□□□□ 0.99
PTPA-209ENST00000414331 SLC52A2Q9HAB3 445 aa21.21■□□□□ 0.99
PTPA-209ENST00000414331 U2SURPO15042 1029 aaKnown RBP21.2■□□□□ 0.98
PTPA-209ENST00000414331 RNMTO43148 476 aaKnown RBP21.19■□□□□ 0.98
PTPA-209ENST00000414331 RPS6KA4O75676 772 aa21.19■□□□□ 0.98
PTPA-209ENST00000414331 MMP10P09238 476 aa21.19■□□□□ 0.98
PTPA-209ENST00000414331 RFC4P35249 363 aa21.19■□□□□ 0.98
PTPA-209ENST00000414331 KIF13BQ9NQT8 1826 aa21.19■□□□□ 0.98
PTPA-209ENST00000414331 CRKLP46109 303 aaKnown RBP21.18■□□□□ 0.98
PTPA-209ENST00000414331 MTHFSDQ2M296 383 aaKnown RBP21.18■□□□□ 0.98
PTPA-209ENST00000414331 NLGN1Q8N2Q7 840 aa21.18■□□□□ 0.98
PTPA-209ENST00000414331 ARHGEF1Q92888 912 aaKnown RBP21.17■□□□□ 0.98
PTPA-209ENST00000414331 CFAP53Q96M91 514 aa21.17■□□□□ 0.98
PTPA-209ENST00000414331 LGR6Q9HBX8 967 aa21.17■□□□□ 0.98
PTPA-209ENST00000414331 GOLGB1Q14789 3259 aaKnown RBP21.16■□□□□ 0.98
PTPA-209ENST00000414331 UBR2Q8IWV8 1755 aa21.15■□□□□ 0.98
PTPA-209ENST00000414331 KCPQ6ZWJ8 1503 aa21.15■□□□□ 0.98
PTPA-209ENST00000414331 GAS2L2Q8NHY3 880 aa21.14■□□□□ 0.97
PTPA-209ENST00000414331 C10orf71Q711Q0 1435 aa21.13■□□□□ 0.97
PTPA-209ENST00000414331 GYS1P13807 737 aa21.13■□□□□ 0.97
PTPA-209ENST00000414331 N4BP2Q86UW6 1770 aaPredicted RBP21.13■□□□□ 0.97
PTPA-209ENST00000414331 KIAA1551Q9HCM1 1747 aa21.12■□□□□ 0.97
PTPA-209ENST00000414331 SLC39A6Q13433 755 aa21.12■□□□□ 0.97
PTPA-209ENST00000414331 DNAJC10Q8IXB1 793 aa21.12■□□□□ 0.97
PTPA-209ENST00000414331 CCDC87Q9NVE4 849 aa21.12■□□□□ 0.97
PTPA-209ENST00000414331 PARP3Q9Y6F1 533 aa21.12■□□□□ 0.97
PTPA-209ENST00000414331 PXDNLA1KZ92 1463 aa21.12■□□□□ 0.97
PTPA-209ENST00000414331 SIPA1L3O60292 1781 aaPredicted RBP21.11■□□□□ 0.97
PTPA-209ENST00000414331 WWC3Q9ULE0 1092 aa21.11■□□□□ 0.97
PTPA-209ENST00000414331 NUDCQ9Y266 331 aa21.11■□□□□ 0.97
PTPA-209ENST00000414331 USP42Q9H9J4 1324 aaKnown RBP21.1■□□□□ 0.97
PTPA-209ENST00000414331 TTC5Q8N0Z6 440 aa21.1■□□□□ 0.97
PTPA-209ENST00000414331 GNAT3A8MTJ3 354 aa21.09■□□□□ 0.97
PTPA-209ENST00000414331 TEFQ10587 303 aa21.09■□□□□ 0.97
PTPA-209ENST00000414331 INTS5Q6P9B9 1019 aaKnown RBP21.09■□□□□ 0.97
PTPA-209ENST00000414331 SRP68Q9UHB9 627 aaKnown RBP21.08■□□□□ 0.97
PTPA-209ENST00000414331 SOS1Q07889 1333 aaPredicted RBP21.07■□□□□ 0.96
PTPA-209ENST00000414331 CYP19A1P11511 503 aaPredicted RBP21.07■□□□□ 0.96
PTPA-209ENST00000414331 PPP2R1AP30153 589 aa21.07■□□□□ 0.96
PTPA-209ENST00000414331 PRKAR2BP31323 418 aa21.07■□□□□ 0.96
PTPA-209ENST00000414331 TGFB2P61812 414 aa21.07■□□□□ 0.96
PTPA-209ENST00000414331 VSIG10Q8N0Z9 540 aa21.07■□□□□ 0.96
PTPA-209ENST00000414331 ZPR1O75312 459 aa21.06■□□□□ 0.96
PTPA-209ENST00000414331 GIGYF1O75420 1035 aaPredicted RBP21.06■□□□□ 0.96
PTPA-209ENST00000414331 BRCA1P38398 1863 aaKnown RBP21.06■□□□□ 0.96
PTPA-209ENST00000414331 COL15A1P39059 1388 aa21.06■□□□□ 0.96
PTPA-209ENST00000414331 ATP10DQ9P241 1426 aa21.05■□□□□ 0.96
PTPA-209ENST00000414331 RSPH6AQ9H0K4 717 aa21.05■□□□□ 0.96
PTPA-209ENST00000414331 U2AF1L5P0DN76 240 aaPredicted RBP21.04■□□□□ 0.96
PTPA-209ENST00000414331 U2AF1Q01081 240 aaKnown RBP eCLIP21.04■□□□□ 0.96
PTPA-209ENST00000414331 FKBP8Q14318 412 aa21.04■□□□□ 0.96
PTPA-209ENST00000414331 IL17REQ8NFR9 667 aa21.03■□□□□ 0.96
PTPA-209ENST00000414331 ZBTB1Q9Y2K1 713 aa21.03■□□□□ 0.96
PTPA-209ENST00000414331 ADCY9O60503 1353 aa21.02■□□□□ 0.96
PTPA-209ENST00000414331 A0A0G2JLW4 131 aa21.02■□□□□ 0.96
PTPA-209ENST00000414331 STARD3NLO95772 234 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms