RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 ATG3Q9NT62 314 aa22.76■■□□□ 1.23
COL6A2-205ENST00000413758 LINC00116Q8NCU8 138 aa22.75■■□□□ 1.23
COL6A2-205ENST00000413758 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
COL6A2-205ENST00000413758 MAP3K5Q99683 1374 aa22.74■■□□□ 1.23
COL6A2-205ENST00000413758 DIAPH1O60610 1272 aaKnown RBP22.73■■□□□ 1.23
COL6A2-205ENST00000413758 HMOX1P09601 288 aa22.73■■□□□ 1.23
COL6A2-205ENST00000413758 GPR162Q16538 588 aa22.73■■□□□ 1.23
COL6A2-205ENST00000413758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.72■■□□□ 1.23
COL6A2-205ENST00000413758 ITPK1Q13572 414 aa22.72■■□□□ 1.23
COL6A2-205ENST00000413758 SMIM5Q71RC9 77 aa22.72■■□□□ 1.23
COL6A2-205ENST00000413758 KDM6AO15550 1401 aaPredicted RBP22.72■■□□□ 1.23
COL6A2-205ENST00000413758 GNPATO15228 680 aa22.71■■□□□ 1.23
COL6A2-205ENST00000413758 KDRP35968 1356 aa22.71■■□□□ 1.23
COL6A2-205ENST00000413758 COL24A1Q17RW2 1714 aa22.71■■□□□ 1.23
COL6A2-205ENST00000413758 SSFA2P28290 1259 aa22.69■■□□□ 1.22
COL6A2-205ENST00000413758 AMIGO3Q86WK7 504 aa22.69■■□□□ 1.22
COL6A2-205ENST00000413758 NFATC2IPQ8NCF5 419 aa22.68■■□□□ 1.22
COL6A2-205ENST00000413758 NLGN2Q8NFZ4 835 aa22.68■■□□□ 1.22
COL6A2-205ENST00000413758 NPC1L1Q9UHC9 1359 aa22.67■■□□□ 1.22
COL6A2-205ENST00000413758 UBR3Q6ZT12 1888 aa22.67■■□□□ 1.22
COL6A2-205ENST00000413758 U2SURPO15042 1029 aaKnown RBP22.67■■□□□ 1.22
COL6A2-205ENST00000413758 PTCD1O75127 700 aaKnown RBP22.67■■□□□ 1.22
COL6A2-205ENST00000413758 AKAP4Q5JQC9 854 aa22.67■■□□□ 1.22
COL6A2-205ENST00000413758 RTCBQ9Y3I0 505 aaKnown RBP22.65■■□□□ 1.22
COL6A2-205ENST00000413758 SLC4A9Q96Q91 983 aa22.64■■□□□ 1.21
COL6A2-205ENST00000413758 TRAPPC3LQ5T215 181 aa22.62■■□□□ 1.21
COL6A2-205ENST00000413758 CFAP53Q96M91 514 aa22.62■■□□□ 1.21
COL6A2-205ENST00000413758 MTHFSDQ2M296 383 aaKnown RBP22.61■■□□□ 1.21
COL6A2-205ENST00000413758 LGR6Q9HBX8 967 aa22.61■■□□□ 1.21
COL6A2-205ENST00000413758 SCN11AQ9UI33 1791 aa22.61■■□□□ 1.21
COL6A2-205ENST00000413758 RNMTO43148 476 aaKnown RBP22.6■■□□□ 1.21
COL6A2-205ENST00000413758 RC3H1Q5TC82 1133 aaKnown RBP22.6■■□□□ 1.21
COL6A2-205ENST00000413758 SLC52A2Q9HAB3 445 aa22.6■■□□□ 1.21
COL6A2-205ENST00000413758 CD2APQ9Y5K6 639 aa22.6■■□□□ 1.21
COL6A2-205ENST00000413758 CNTNAP4Q9C0A0 1308 aa22.58■■□□□ 1.21
COL6A2-205ENST00000413758 RFC4P35249 363 aa22.58■■□□□ 1.21
COL6A2-205ENST00000413758 RPS6KA4O75676 772 aa22.57■■□□□ 1.2
COL6A2-205ENST00000413758 COL3A1P02461 1466 aaPredicted RBP22.57■■□□□ 1.2
COL6A2-205ENST00000413758 ZNF831Q5JPB2 1677 aa22.57■■□□□ 1.2
COL6A2-205ENST00000413758 CHD4Q14839 1912 aa22.57■■□□□ 1.2
COL6A2-205ENST00000413758 ADRA2BP18089 450 aa22.56■■□□□ 1.2
COL6A2-205ENST00000413758 CRKLP46109 303 aaKnown RBP22.56■■□□□ 1.2
COL6A2-205ENST00000413758 ARHGEF1Q92888 912 aaKnown RBP22.56■■□□□ 1.2
COL6A2-205ENST00000413758 COL5A3P25940 1745 aaPredicted RBP22.55■■□□□ 1.2
COL6A2-205ENST00000413758 MMP10P09238 476 aa22.55■■□□□ 1.2
COL6A2-205ENST00000413758 SLC39A6Q13433 755 aa22.55■■□□□ 1.2
COL6A2-205ENST00000413758 NUDCQ9Y266 331 aa22.55■■□□□ 1.2
COL6A2-205ENST00000413758 GRIN3BO60391 1043 aa22.54■■□□□ 1.2
COL6A2-205ENST00000413758 YBX3P16989 372 aaKnown RBP eCLIP22.54■■□□□ 1.2
COL6A2-205ENST00000413758 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
COL6A2-205ENST00000413758 GAS2L2Q8NHY3 880 aa22.54■■□□□ 1.2
COL6A2-205ENST00000413758 PPP2R1AP30153 589 aa22.52■■□□□ 1.2
COL6A2-205ENST00000413758 DNAJC10Q8IXB1 793 aa22.52■■□□□ 1.2
COL6A2-205ENST00000413758 ZNF784Q8NCA9 323 aaPredicted RBP22.52■■□□□ 1.2
COL6A2-205ENST00000413758 WWC3Q9ULE0 1092 aa22.52■■□□□ 1.2
COL6A2-205ENST00000413758 VIRMAQ69YN4 1812 aaKnown RBP22.52■■□□□ 1.2
COL6A2-205ENST00000413758 GNAT3A8MTJ3 354 aa22.51■■□□□ 1.19
COL6A2-205ENST00000413758 TEFQ10587 303 aa22.51■■□□□ 1.19
COL6A2-205ENST00000413758 MRC1P22897 1456 aa22.5■■□□□ 1.19
COL6A2-205ENST00000413758 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
COL6A2-205ENST00000413758 PRKAR2BP31323 418 aa22.5■■□□□ 1.19
COL6A2-205ENST00000413758 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
COL6A2-205ENST00000413758 TTC5Q8N0Z6 440 aa22.5■■□□□ 1.19
COL6A2-205ENST00000413758 MYH14Q7Z406 1995 aaKnown RBP22.5■■□□□ 1.19
COL6A2-205ENST00000413758 TJP1Q07157 1748 aa22.49■■□□□ 1.19
COL6A2-205ENST00000413758 GYS1P13807 737 aa22.49■■□□□ 1.19
COL6A2-205ENST00000413758 CCDC87Q9NVE4 849 aa22.49■■□□□ 1.19
COL6A2-205ENST00000413758 PARP3Q9Y6F1 533 aa22.49■■□□□ 1.19
COL6A2-205ENST00000413758 SRP68Q9UHB9 627 aaKnown RBP22.48■■□□□ 1.19
COL6A2-205ENST00000413758 INTS5Q6P9B9 1019 aaKnown RBP22.47■■□□□ 1.19
COL6A2-205ENST00000413758 CICQ96RK0 1608 aaPredicted RBP22.46■■□□□ 1.19
COL6A2-205ENST00000413758 PHACTR3Q96KR7 559 aa22.46■■□□□ 1.19
COL6A2-205ENST00000413758 RSPH6AQ9H0K4 717 aa22.46■■□□□ 1.19
COL6A2-205ENST00000413758 ZPR1O75312 459 aa22.45■■□□□ 1.18
COL6A2-205ENST00000413758 IL17REQ8NFR9 667 aa22.45■■□□□ 1.18
COL6A2-205ENST00000413758 C4AP0C0L4 1744 aa22.45■■□□□ 1.18
COL6A2-205ENST00000413758 CYP19A1P11511 503 aaPredicted RBP22.44■■□□□ 1.18
COL6A2-205ENST00000413758 ADAMTS7Q9UKP4 1686 aa22.44■■□□□ 1.18
COL6A2-205ENST00000413758 KCPQ6ZWJ8 1503 aa22.43■■□□□ 1.18
COL6A2-205ENST00000413758 USP42Q9H9J4 1324 aaKnown RBP22.43■■□□□ 1.18
COL6A2-205ENST00000413758 VSIG10Q8N0Z9 540 aa22.43■■□□□ 1.18
COL6A2-205ENST00000413758 FKBP8Q14318 412 aa22.42■■□□□ 1.18
COL6A2-205ENST00000413758 RTF1Q92541 710 aaKnown RBP22.42■■□□□ 1.18
COL6A2-205ENST00000413758 SOS1Q07889 1333 aaPredicted RBP22.41■■□□□ 1.18
COL6A2-205ENST00000413758 FCHSD2O94868 740 aa22.41■■□□□ 1.18
COL6A2-205ENST00000413758 STARD3NLO95772 234 aa22.41■■□□□ 1.18
COL6A2-205ENST00000413758 CANXP27824 592 aaKnown RBP22.41■■□□□ 1.18
COL6A2-205ENST00000413758 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
COL6A2-205ENST00000413758 A0A0G2JLW4 131 aa22.4■■□□□ 1.18
COL6A2-205ENST00000413758 NEFMP07197 916 aa22.4■■□□□ 1.18
COL6A2-205ENST00000413758 TGFB2P61812 414 aa22.4■■□□□ 1.18
COL6A2-205ENST00000413758 USPL1Q5W0Q7 1092 aa22.4■■□□□ 1.18
COL6A2-205ENST00000413758 ZNF790Q6PG37 636 aa22.4■■□□□ 1.18
COL6A2-205ENST00000413758 ZNF496Q96IT1 587 aaPredicted RBP22.39■■□□□ 1.17
COL6A2-205ENST00000413758 COL15A1P39059 1388 aa22.38■■□□□ 1.17
COL6A2-205ENST00000413758 BTBD11A6QL63 1104 aa22.38■■□□□ 1.17
COL6A2-205ENST00000413758 ZNF330Q9Y3S2 320 aaPredicted RBP22.38■■□□□ 1.17
COL6A2-205ENST00000413758 C10orf71Q711Q0 1435 aa22.38■■□□□ 1.17
COL6A2-205ENST00000413758 PXDNLA1KZ92 1463 aa22.37■■□□□ 1.17
COL6A2-205ENST00000413758 FMNL2Q96PY5 1086 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms