RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 SALL2Q9Y467 1007 aaPredicted RBP8.7□□□□□ -1.02
NOD1-203ENST00000413433 NUP160Q12769 1436 aa8.7□□□□□ -1.02
NOD1-203ENST00000413433 PRG4Q92954 1404 aaPredicted RBP8.7□□□□□ -1.02
NOD1-203ENST00000413433 MCCD1P59942 119 aaPredicted RBP8.69□□□□□ -1.02
NOD1-203ENST00000413433 PTK2Q05397 1052 aa8.69□□□□□ -1.02
NOD1-203ENST00000413433 DPYDQ12882 1025 aa8.69□□□□□ -1.02
NOD1-203ENST00000413433 TRIM50Q86XT4 487 aa8.69□□□□□ -1.02
NOD1-203ENST00000413433 ZNF594Q96JF6 807 aaPredicted RBP8.69□□□□□ -1.02
NOD1-203ENST00000413433 IGSF5Q9NSI5 407 aa8.69□□□□□ -1.02
NOD1-203ENST00000413433 CEP126Q9P2H0 1117 aa8.69□□□□□ -1.02
NOD1-203ENST00000413433 RBM19Q9Y4C8 960 aaKnown RBP8.69□□□□□ -1.02
NOD1-203ENST00000413433 TTBK1Q5TCY1 1321 aaPredicted RBP8.69□□□□□ -1.02
NOD1-203ENST00000413433 F12P00748 615 aaPredicted RBP8.68□□□□□ -1.02
NOD1-203ENST00000413433 ATP1A2P50993 1020 aa8.68□□□□□ -1.02
NOD1-203ENST00000413433 FAM69CQ0P6D2 419 aa8.68□□□□□ -1.02
NOD1-203ENST00000413433 PTPRNQ16849 979 aa8.68□□□□□ -1.02
NOD1-203ENST00000413433 OGFOD1Q8N543 542 aa8.68□□□□□ -1.02
NOD1-203ENST00000413433 SLAIN2Q9P270 581 aa8.68□□□□□ -1.02
NOD1-203ENST00000413433 MAP7D1Q3KQU3 841 aa8.67□□□□□ -1.02
NOD1-203ENST00000413433 ZNF326Q5BKZ1 582 aaKnown RBP8.67□□□□□ -1.02
NOD1-203ENST00000413433 ARMC2Q8NEN0 867 aa8.67□□□□□ -1.02
NOD1-203ENST00000413433 BCL11AQ9H165 835 aa8.67□□□□□ -1.02
NOD1-203ENST00000413433 GPSM3Q9Y4H4 160 aa8.67□□□□□ -1.02
NOD1-203ENST00000413433 TOP2BQ02880 1626 aa8.66□□□□□ -1.02
NOD1-203ENST00000413433 ADAMTS12P58397 1594 aa8.66□□□□□ -1.02
NOD1-203ENST00000413433 ANKRD33BA6NCL7 494 aa8.66□□□□□ -1.02
NOD1-203ENST00000413433 ABL1P00519 1130 aa8.66□□□□□ -1.02
NOD1-203ENST00000413433 KCNH2Q12809 1159 aa8.66□□□□□ -1.02
NOD1-203ENST00000413433 MSS51Q4VC12 460 aa8.66□□□□□ -1.02
NOD1-203ENST00000413433 DNAAF2Q9NVR5 837 aaKnown RBP8.66□□□□□ -1.02
NOD1-203ENST00000413433 NOD1Q9Y239 953 aa8.66□□□□□ -1.02
NOD1-203ENST00000413433 J3QL48 77 aa8.65□□□□□ -1.02
NOD1-203ENST00000413433 TCF3P15923 654 aa8.65□□□□□ -1.02
NOD1-203ENST00000413433 JUNDP17535 347 aa8.65□□□□□ -1.02
NOD1-203ENST00000413433 TRIM32Q13049 653 aa8.65□□□□□ -1.02
NOD1-203ENST00000413433 NBPF14Q5TI25 921 aa8.65□□□□□ -1.02
NOD1-203ENST00000413433 ZSCAN1Q8NBB4 408 aa8.65□□□□□ -1.02
NOD1-203ENST00000413433 GPKOWQ92917 476 aaPredicted RBP eCLIP8.65□□□□□ -1.02
NOD1-203ENST00000413433 MRGPRX2Q96LB1 330 aa8.65□□□□□ -1.02
NOD1-203ENST00000413433 H3BRB1 525 aa8.64□□□□□ -1.03
NOD1-203ENST00000413433 PDXDC2PQ6P474 469 aa8.64□□□□□ -1.03
NOD1-203ENST00000413433 C1orf216Q8TAB5 229 aa8.64□□□□□ -1.03
NOD1-203ENST00000413433 TUT1Q9H6E5 874 aaKnown RBP8.64□□□□□ -1.03
NOD1-203ENST00000413433 NXF1Q9UBU9 619 aaKnown RBP8.64□□□□□ -1.03
NOD1-203ENST00000413433 PRMT3O60678 531 aa8.63□□□□□ -1.03
NOD1-203ENST00000413433 GLYCTKQ8IVS8 523 aa8.63□□□□□ -1.03
NOD1-203ENST00000413433 HPS1Q92902 700 aa8.63□□□□□ -1.03
NOD1-203ENST00000413433 ERICH3Q5RHP9 1530 aa8.63□□□□□ -1.03
NOD1-203ENST00000413433 BIVM-ERCC5R4GMW8 1640 aa8.62□□□□□ -1.03
NOD1-203ENST00000413433 HSP90B1P14625 803 aaKnown RBP8.62□□□□□ -1.03
NOD1-203ENST00000413433 CLDN10P78369 228 aa8.62□□□□□ -1.03
NOD1-203ENST00000413433 NOM1Q5C9Z4 860 aaKnown RBP8.62□□□□□ -1.03
NOD1-203ENST00000413433 NPAS4Q8IUM7 802 aa8.62□□□□□ -1.03
NOD1-203ENST00000413433 NPAS3Q8IXF0 933 aa8.62□□□□□ -1.03
NOD1-203ENST00000413433 LARGE2Q8N3Y3 721 aa8.62□□□□□ -1.03
NOD1-203ENST00000413433 IRF7Q92985 503 aa8.62□□□□□ -1.03
NOD1-203ENST00000413433 EGFL7Q9UHF1 273 aa8.62□□□□□ -1.03
NOD1-203ENST00000413433 IGF1RP08069 1367 aa8.61□□□□□ -1.03
NOD1-203ENST00000413433 CCNYL3P0C7X3 344 aa8.61□□□□□ -1.03
NOD1-203ENST00000413433 SCNN1AP37088 669 aa8.61□□□□□ -1.03
NOD1-203ENST00000413433 MMP16P51512 607 aa8.61□□□□□ -1.03
NOD1-203ENST00000413433 PHTF2Q8N3S3 785 aa8.61□□□□□ -1.03
NOD1-203ENST00000413433 ARHGAP9Q9BRR9 750 aa8.61□□□□□ -1.03
NOD1-203ENST00000413433 DOLKQ9UPQ8 538 aa8.61□□□□□ -1.03
NOD1-203ENST00000413433 SHROOM2Q13796 1616 aa8.61□□□□□ -1.03
NOD1-203ENST00000413433 DXOO77932 396 aaKnown RBP8.6□□□□□ -1.03
NOD1-203ENST00000413433 MAPK1P28482 360 aa8.6□□□□□ -1.03
NOD1-203ENST00000413433 GMPRP36959 345 aa8.6□□□□□ -1.03
NOD1-203ENST00000413433 SEC13P55735 322 aa8.6□□□□□ -1.03
NOD1-203ENST00000413433 ZNF211Q13398 564 aaPredicted RBP8.6□□□□□ -1.03
NOD1-203ENST00000413433 OXLD1Q5BKU9 147 aa8.6□□□□□ -1.03
NOD1-203ENST00000413433 ZBTB33Q86T24 672 aa8.6□□□□□ -1.03
NOD1-203ENST00000413433 ADAM32Q8TC27 787 aa8.6□□□□□ -1.03
NOD1-203ENST00000413433 CXXC1Q9P0U4 656 aaPredicted RBP8.6□□□□□ -1.03
NOD1-203ENST00000413433 LORP23490 312 aaPredicted RBP8.59□□□□□ -1.03
NOD1-203ENST00000413433 PSME1Q06323 249 aa8.59□□□□□ -1.03
NOD1-203ENST00000413433 DZIP3Q86Y13 1208 aaKnown RBP8.59□□□□□ -1.03
NOD1-203ENST00000413433 SIX5Q8N196 739 aa8.59□□□□□ -1.03
NOD1-203ENST00000413433 PRIMPOLQ96LW4 560 aa8.59□□□□□ -1.03
NOD1-203ENST00000413433 NUDT12Q9BQG2 462 aa8.59□□□□□ -1.03
NOD1-203ENST00000413433 GTF2IP78347 998 aa8.58□□□□□ -1.04
NOD1-203ENST00000413433 ANO2Q9NQ90 1003 aa8.58□□□□□ -1.04
NOD1-203ENST00000413433 CHIC2Q9UKJ5 165 aa8.58□□□□□ -1.04
NOD1-203ENST00000413433 ICMTO60725 284 aa8.57□□□□□ -1.04
NOD1-203ENST00000413433 ZSCAN29Q8IWY8 852 aaPredicted RBP8.57□□□□□ -1.04
NOD1-203ENST00000413433 ABCC10Q5T3U5 1492 aa8.57□□□□□ -1.04
NOD1-203ENST00000413433 VAMP1P23763 118 aa8.56□□□□□ -1.04
NOD1-203ENST00000413433 CCDC102BQ68D86 513 aa8.56□□□□□ -1.04
NOD1-203ENST00000413433 TAS1R3Q7RTX0 852 aa8.56□□□□□ -1.04
NOD1-203ENST00000413433 TPCN2Q8NHX9 752 aa8.56□□□□□ -1.04
NOD1-203ENST00000413433 PUS7Q96PZ0 661 aaKnown RBP8.56□□□□□ -1.04
NOD1-203ENST00000413433 OCSTAMPQ9BR26 566 aa8.56□□□□□ -1.04
NOD1-203ENST00000413433 EVA1BQ9NVM1 165 aa8.56□□□□□ -1.04
NOD1-203ENST00000413433 KIAA1024Q9UPX6 916 aa8.56□□□□□ -1.04
NOD1-203ENST00000413433 PTPRGP23470 1445 aa8.55□□□□□ -1.04
NOD1-203ENST00000413433 KIF27Q86VH2 1401 aa8.55□□□□□ -1.04
NOD1-203ENST00000413433 KIAA0586Q9BVV6 1533 aa8.55□□□□□ -1.04
NOD1-203ENST00000413433 C21orf2O43822 256 aa8.55□□□□□ -1.04
NOD1-203ENST00000413433 CDK11BP21127 795 aaKnown RBP8.55□□□□□ -1.04
NOD1-203ENST00000413433 WNT7BP56706 349 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms