RNA–Protein interactions for RNA: ENST00000413170.1

PCCA-204, Transcript of propionyl-CoA carboxylase subunit alpha, humanhuman

TSL 3

Gene PCCA, Length 397 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCA-204ENST00000413170 PIGBQ92521 554 aa18.07■□□□□ 0.48
PCCA-204ENST00000413170 KDM2BQ8NHM5 1336 aa18.06■□□□□ 0.48
PCCA-204ENST00000413170 LOC102724428A0A0B4J2F2 783 aa18.06■□□□□ 0.48
PCCA-204ENST00000413170 SIK1P57059 783 aa18.06■□□□□ 0.48
PCCA-204ENST00000413170 RRAGCQ9HB90 399 aa18.06■□□□□ 0.48
PCCA-204ENST00000413170 ITGB4P16144 1822 aa18.05■□□□□ 0.48
PCCA-204ENST00000413170 PKD1L3Q7Z443 1732 aa18.05■□□□□ 0.48
PCCA-204ENST00000413170 ITPK1Q13572 414 aa18.04■□□□□ 0.48
PCCA-204ENST00000413170 RNF181Q9P0P0 153 aa18.04■□□□□ 0.48
PCCA-204ENST00000413170 MAP2P11137 1827 aaKnown RBP18.03■□□□□ 0.48
PCCA-204ENST00000413170 HOXD11P31277 338 aaPredicted RBP18.03■□□□□ 0.48
PCCA-204ENST00000413170 SMC1BQ8NDV3 1235 aa18.03■□□□□ 0.48
PCCA-204ENST00000413170 CCDC87Q9NVE4 849 aa18.02■□□□□ 0.48
PCCA-204ENST00000413170 ATP6V1AP38606 617 aa18.01■□□□□ 0.47
PCCA-204ENST00000413170 TMF1P82094 1093 aa18.01■□□□□ 0.47
PCCA-204ENST00000413170 TNRC6CQ9HCJ0 1690 aaKnown RBP18■□□□□ 0.47
PCCA-204ENST00000413170 ASAP1Q9ULH1 1129 aa18■□□□□ 0.47
PCCA-204ENST00000413170 BRCA1P38398 1863 aaKnown RBP18■□□□□ 0.47
PCCA-204ENST00000413170 C4AP0C0L4 1744 aa17.99■□□□□ 0.47
PCCA-204ENST00000413170 SLC34A2O95436 690 aa17.99■□□□□ 0.47
PCCA-204ENST00000413170 NLGN1Q8N2Q7 840 aa17.99■□□□□ 0.47
PCCA-204ENST00000413170 SIN3AQ96ST3 1273 aa17.99■□□□□ 0.47
PCCA-204ENST00000413170 CARD11Q9BXL7 1154 aa17.99■□□□□ 0.47
PCCA-204ENST00000413170 KCNA3P22001 575 aa17.98■□□□□ 0.47
PCCA-204ENST00000413170 HSP90AB2PQ58FF8 381 aa17.98■□□□□ 0.47
PCCA-204ENST00000413170 TRAPPC3LQ5T215 181 aa17.98■□□□□ 0.47
PCCA-204ENST00000413170 TMOD3Q9NYL9 352 aa17.98■□□□□ 0.47
PCCA-204ENST00000413170 PARP3Q9Y6F1 533 aa17.98■□□□□ 0.47
PCCA-204ENST00000413170 ARFGEF1Q9Y6D6 1849 aa17.98■□□□□ 0.47
PCCA-204ENST00000413170 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
PCCA-204ENST00000413170 PIM2Q9P1W9 311 aa17.97■□□□□ 0.47
PCCA-204ENST00000413170 RTCBQ9Y3I0 505 aaKnown RBP17.97■□□□□ 0.47
PCCA-204ENST00000413170 INSRP06213 1382 aa17.96■□□□□ 0.47
PCCA-204ENST00000413170 NEUROD1Q13562 356 aa17.96■□□□□ 0.47
PCCA-204ENST00000413170 DALRD3Q5D0E6 543 aaKnown RBP17.96■□□□□ 0.47
PCCA-204ENST00000413170 GGNBP2Q9H3C7 697 aa17.96■□□□□ 0.47
PCCA-204ENST00000413170 GYS1P13807 737 aa17.95■□□□□ 0.46
PCCA-204ENST00000413170 ARHGEF1Q92888 912 aaKnown RBP17.95■□□□□ 0.46
PCCA-204ENST00000413170 NKX1-1Q15270 411 aaPredicted RBP17.94■□□□□ 0.46
PCCA-204ENST00000413170 FLT4P35916 1363 aa17.93■□□□□ 0.46
PCCA-204ENST00000413170 RFC4P35249 363 aa17.93■□□□□ 0.46
PCCA-204ENST00000413170 RASSF7Q02833 373 aa17.92■□□□□ 0.46
PCCA-204ENST00000413170 PUS7Q96PZ0 661 aaKnown RBP17.92■□□□□ 0.46
PCCA-204ENST00000413170 ATG3Q9NT62 314 aa17.92■□□□□ 0.46
PCCA-204ENST00000413170 SPG7Q9UQ90 795 aa17.92■□□□□ 0.46
PCCA-204ENST00000413170 KDRP35968 1356 aa17.91■□□□□ 0.46
PCCA-204ENST00000413170 CHRNA5P30532 468 aa17.91■□□□□ 0.46
PCCA-204ENST00000413170 RNF216Q9NWF9 866 aaPredicted RBP17.91■□□□□ 0.46
PCCA-204ENST00000413170 FYB1O15117 783 aa17.9■□□□□ 0.46
PCCA-204ENST00000413170 RBM42Q9BTD8 480 aaKnown RBP17.9■□□□□ 0.46
PCCA-204ENST00000413170 VEGFAP15692 232 aaPredicted RBP17.89■□□□□ 0.45
PCCA-204ENST00000413170 SLC4A9Q96Q91 983 aa17.89■□□□□ 0.45
PCCA-204ENST00000413170 SBF1O95248 1867 aa17.88■□□□□ 0.45
PCCA-204ENST00000413170 DDR1Q08345 913 aa17.87■□□□□ 0.45
PCCA-204ENST00000413170 SRP68Q9UHB9 627 aaKnown RBP17.87■□□□□ 0.45
PCCA-204ENST00000413170 MKRN1Q9UHC7 482 aaKnown RBP17.87■□□□□ 0.45
PCCA-204ENST00000413170 EMILIN1Q9Y6C2 1016 aa17.87■□□□□ 0.45
PCCA-204ENST00000413170 CNTNAP4Q9C0A0 1308 aa17.87■□□□□ 0.45
PCCA-204ENST00000413170 ZC3H4Q9UPT8 1303 aaKnown RBP17.87■□□□□ 0.45
PCCA-204ENST00000413170 GLTPD2A6NH11 291 aa17.86■□□□□ 0.45
PCCA-204ENST00000413170 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
PCCA-204ENST00000413170 PHKG2P15735 406 aa17.86■□□□□ 0.45
PCCA-204ENST00000413170 RC3H1Q5TC82 1133 aaKnown RBP17.86■□□□□ 0.45
PCCA-204ENST00000413170 NCAPD2Q15021 1401 aa17.86■□□□□ 0.45
PCCA-204ENST00000413170 FOXN1O15353 648 aa17.85■□□□□ 0.45
PCCA-204ENST00000413170 KDM6AO15550 1401 aaPredicted RBP17.85■□□□□ 0.45
PCCA-204ENST00000413170 COL5A3P25940 1745 aaPredicted RBP17.85■□□□□ 0.45
PCCA-204ENST00000413170 FKBP8Q14318 412 aa17.85■□□□□ 0.45
PCCA-204ENST00000413170 KIF24Q5T7B8 1368 aa17.85■□□□□ 0.45
PCCA-204ENST00000413170 IFNL2Q8IZJ0 200 aa17.85■□□□□ 0.45
PCCA-204ENST00000413170 PPM1GO15355 546 aaPredicted RBP17.84■□□□□ 0.45
PCCA-204ENST00000413170 LMNB1P20700 586 aa17.84■□□□□ 0.45
PCCA-204ENST00000413170 TESK2Q96S53 571 aa17.84■□□□□ 0.45
PCCA-204ENST00000413170 TIAM2Q8IVF5 1701 aa17.82■□□□□ 0.44
PCCA-204ENST00000413170 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
PCCA-204ENST00000413170 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.82■□□□□ 0.44
PCCA-204ENST00000413170 KIF20BQ96Q89 1820 aa17.82■□□□□ 0.44
PCCA-204ENST00000413170 USP42Q9H9J4 1324 aaKnown RBP17.81■□□□□ 0.44
PCCA-204ENST00000413170 EYA1Q99502 592 aa17.81■□□□□ 0.44
PCCA-204ENST00000413170 CREBZFQ9NS37 354 aa17.81■□□□□ 0.44
PCCA-204ENST00000413170 ZNF831Q5JPB2 1677 aa17.8■□□□□ 0.44
PCCA-204ENST00000413170 TONSLQ96HA7 1378 aa17.8■□□□□ 0.44
PCCA-204ENST00000413170 ST20-MTHFSA0A0A6YYL1 179 aa17.8■□□□□ 0.44
PCCA-204ENST00000413170 POLRMTO00411 1230 aaKnown RBP17.8■□□□□ 0.44
PCCA-204ENST00000413170 PRDM10Q9NQV6 1147 aa17.8■□□□□ 0.44
PCCA-204ENST00000413170 MYH14Q7Z406 1995 aaKnown RBP17.8■□□□□ 0.44
PCCA-204ENST00000413170 POTECB2RU33 542 aa17.79■□□□□ 0.44
PCCA-204ENST00000413170 CRKLP46109 303 aaKnown RBP17.79■□□□□ 0.44
PCCA-204ENST00000413170 PTCD1O75127 700 aaKnown RBP17.78■□□□□ 0.44
PCCA-204ENST00000413170 AIDAQ96BJ3 306 aa17.78■□□□□ 0.44
PCCA-204ENST00000413170 CTCFP49711 727 aaPredicted RBP17.77■□□□□ 0.44
PCCA-204ENST00000413170 CNTNAP1P78357 1384 aa17.77■□□□□ 0.43
PCCA-204ENST00000413170 ERVV-2B6SEH9 535 aa17.76■□□□□ 0.43
PCCA-204ENST00000413170 NFKBIEO00221 500 aa17.75■□□□□ 0.43
PCCA-204ENST00000413170 POTEIP0CG38 1075 aa17.75■□□□□ 0.43
PCCA-204ENST00000413170 POTEJP0CG39 1038 aa17.75■□□□□ 0.43
PCCA-204ENST00000413170 NCBP3Q53F19 620 aaKnown RBP17.75■□□□□ 0.43
PCCA-204ENST00000413170 CHADLQ6NUI6 762 aa17.75■□□□□ 0.43
PCCA-204ENST00000413170 TM4SF1P30408 202 aa17.74■□□□□ 0.43
PCCA-204ENST00000413170 DPY19L2Q6NUT2 758 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms