RNA–Protein interactions for RNA: ENST00000412847.5

PTPRN-203, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-203ENST00000412847 TMOD3Q9NYL9 352 aa18.01■□□□□ 0.47
PTPRN-203ENST00000412847 PPM1GO15355 546 aaPredicted RBP17.99■□□□□ 0.47
PTPRN-203ENST00000412847 ITPK1Q13572 414 aa17.99■□□□□ 0.47
PTPRN-203ENST00000412847 KIF3CO14782 793 aa17.98■□□□□ 0.47
PTPRN-203ENST00000412847 ATP6V1AP38606 617 aa17.98■□□□□ 0.47
PTPRN-203ENST00000412847 CARD14Q9BXL6 1004 aa17.98■□□□□ 0.47
PTPRN-203ENST00000412847 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.98■□□□□ 0.47
PTPRN-203ENST00000412847 ASAP1Q9ULH1 1129 aa17.98■□□□□ 0.47
PTPRN-203ENST00000412847 KDRP35968 1356 aa17.98■□□□□ 0.47
PTPRN-203ENST00000412847 SBF1O95248 1867 aa17.98■□□□□ 0.47
PTPRN-203ENST00000412847 C10orf71Q711Q0 1435 aa17.98■□□□□ 0.47
PTPRN-203ENST00000412847 WASHC2AQ641Q2 1341 aa17.98■□□□□ 0.47
PTPRN-203ENST00000412847 TJP1Q07157 1748 aa17.97■□□□□ 0.47
PTPRN-203ENST00000412847 MMP10P09238 476 aa17.96■□□□□ 0.47
PTPRN-203ENST00000412847 PHKG2P15735 406 aa17.96■□□□□ 0.47
PTPRN-203ENST00000412847 IFNL2Q8IZJ0 200 aa17.96■□□□□ 0.47
PTPRN-203ENST00000412847 EYA1Q99502 592 aa17.96■□□□□ 0.47
PTPRN-203ENST00000412847 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
PTPRN-203ENST00000412847 TNRC6CQ9HCJ0 1690 aaKnown RBP17.96■□□□□ 0.47
PTPRN-203ENST00000412847 PLEKHG2Q9H7P9 1386 aa17.95■□□□□ 0.46
PTPRN-203ENST00000412847 ATG3Q9NT62 314 aa17.94■□□□□ 0.46
PTPRN-203ENST00000412847 RTCBQ9Y3I0 505 aaKnown RBP17.93■□□□□ 0.46
PTPRN-203ENST00000412847 CCDC88AQ3V6T2 1871 aa17.92■□□□□ 0.46
PTPRN-203ENST00000412847 TGFB2P61812 414 aa17.92■□□□□ 0.46
PTPRN-203ENST00000412847 BCS1LQ9Y276 419 aa17.92■□□□□ 0.46
PTPRN-203ENST00000412847 DLEC1Q9Y238 1755 aa17.91■□□□□ 0.46
PTPRN-203ENST00000412847 AFDNP55196 1824 aaKnown RBP17.91■□□□□ 0.46
PTPRN-203ENST00000412847 APLP1P51693 650 aa17.91■□□□□ 0.46
PTPRN-203ENST00000412847 TRAPPC3LQ5T215 181 aa17.91■□□□□ 0.46
PTPRN-203ENST00000412847 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
PTPRN-203ENST00000412847 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
PTPRN-203ENST00000412847 CCDC87Q9NVE4 849 aa17.9■□□□□ 0.46
PTPRN-203ENST00000412847 POLKQ9UBT6 870 aa17.9■□□□□ 0.46
PTPRN-203ENST00000412847 CNTNAP4Q9C0A0 1308 aa17.9■□□□□ 0.46
PTPRN-203ENST00000412847 A0A0G2JLW4 131 aa17.89■□□□□ 0.45
PTPRN-203ENST00000412847 TOMM70O94826 608 aa17.89■□□□□ 0.45
PTPRN-203ENST00000412847 ADRA2BP18089 450 aa17.89■□□□□ 0.45
PTPRN-203ENST00000412847 RBM42Q9BTD8 480 aaKnown RBP17.89■□□□□ 0.45
PTPRN-203ENST00000412847 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
PTPRN-203ENST00000412847 ARHGAP27Q6ZUM4 889 aa17.88■□□□□ 0.45
PTPRN-203ENST00000412847 SLC4A9Q96Q91 983 aa17.88■□□□□ 0.45
PTPRN-203ENST00000412847 KDM6AO15550 1401 aaPredicted RBP17.88■□□□□ 0.45
PTPRN-203ENST00000412847 TIAM2Q8IVF5 1701 aa17.87■□□□□ 0.45
PTPRN-203ENST00000412847 ERVV-2B6SEH9 535 aa17.87■□□□□ 0.45
PTPRN-203ENST00000412847 DPEP1P16444 411 aa17.87■□□□□ 0.45
PTPRN-203ENST00000412847 RC3H1Q5TC82 1133 aaKnown RBP17.87■□□□□ 0.45
PTPRN-203ENST00000412847 ARHGEF1Q92888 912 aaKnown RBP17.87■□□□□ 0.45
PTPRN-203ENST00000412847 FCHSD2O94868 740 aa17.86■□□□□ 0.45
PTPRN-203ENST00000412847 HSP90AB1P08238 724 aaKnown RBP17.86■□□□□ 0.45
PTPRN-203ENST00000412847 GYS1P13807 737 aa17.86■□□□□ 0.45
PTPRN-203ENST00000412847 RFC4P35249 363 aa17.86■□□□□ 0.45
PTPRN-203ENST00000412847 NMRK2Q9NPI5 230 aa17.86■□□□□ 0.45
PTPRN-203ENST00000412847 PARP3Q9Y6F1 533 aa17.86■□□□□ 0.45
PTPRN-203ENST00000412847 RPS6KA4O75676 772 aa17.85■□□□□ 0.45
PTPRN-203ENST00000412847 DCAF5Q96JK2 942 aa17.85■□□□□ 0.45
PTPRN-203ENST00000412847 TNNT2P45379 298 aaPredicted RBP17.84■□□□□ 0.45
PTPRN-203ENST00000412847 NRXN2Q9P2S2 1712 aa17.84■□□□□ 0.45
PTPRN-203ENST00000412847 KCPQ6ZWJ8 1503 aa17.83■□□□□ 0.45
PTPRN-203ENST00000412847 PLEKHO1Q53GL0 409 aaPredicted RBP17.82■□□□□ 0.44
PTPRN-203ENST00000412847 ZNF530Q6P9A1 599 aaPredicted RBP17.82■□□□□ 0.44
PTPRN-203ENST00000412847 DNAJC5GQ8N7S2 189 aa17.82■□□□□ 0.44
PTPRN-203ENST00000412847 CABP4P57796 275 aa17.81■□□□□ 0.44
PTPRN-203ENST00000412847 C9orf131Q5VYM1 1079 aa17.81■□□□□ 0.44
PTPRN-203ENST00000412847 C16orf71Q8IYS4 520 aaPredicted RBP17.81■□□□□ 0.44
PTPRN-203ENST00000412847 RBM46Q8TBY0 533 aaKnown RBP17.81■□□□□ 0.44
PTPRN-203ENST00000412847 DICER1Q9UPY3 1922 aaKnown RBP17.8■□□□□ 0.44
PTPRN-203ENST00000412847 CACNA1SQ13698 1873 aa17.8■□□□□ 0.44
PTPRN-203ENST00000412847 KCNA3P22001 575 aa17.8■□□□□ 0.44
PTPRN-203ENST00000412847 POLR3GLQ9BT43 218 aa17.8■□□□□ 0.44
PTPRN-203ENST00000412847 PIM2Q9P1W9 311 aa17.8■□□□□ 0.44
PTPRN-203ENST00000412847 UBR2Q8IWV8 1755 aa17.79■□□□□ 0.44
PTPRN-203ENST00000412847 USP42Q9H9J4 1324 aaKnown RBP17.79■□□□□ 0.44
PTPRN-203ENST00000412847 AMOTQ4VCS5 1084 aa17.79■□□□□ 0.44
PTPRN-203ENST00000412847 KDM2BQ8NHM5 1336 aa17.78■□□□□ 0.44
PTPRN-203ENST00000412847 PTCD1O75127 700 aaKnown RBP17.78■□□□□ 0.44
PTPRN-203ENST00000412847 CRKLP46109 303 aaKnown RBP17.78■□□□□ 0.44
PTPRN-203ENST00000412847 C1orf141Q5JVX7 400 aa17.78■□□□□ 0.44
PTPRN-203ENST00000412847 SRP68Q9UHB9 627 aaKnown RBP17.78■□□□□ 0.44
PTPRN-203ENST00000412847 MTHFSP49914 203 aa17.77■□□□□ 0.44
PTPRN-203ENST00000412847 DDR1Q08345 913 aa17.77■□□□□ 0.44
PTPRN-203ENST00000412847 DALRD3Q5D0E6 543 aaKnown RBP17.77■□□□□ 0.44
PTPRN-203ENST00000412847 RNF181Q9P0P0 153 aa17.77■□□□□ 0.44
PTPRN-203ENST00000412847 ANKRD31Q8N7Z5 1873 aa17.77■□□□□ 0.43
PTPRN-203ENST00000412847 FSTL1Q12841 308 aa17.76■□□□□ 0.43
PTPRN-203ENST00000412847 FKBP8Q14318 412 aa17.76■□□□□ 0.43
PTPRN-203ENST00000412847 MRC1P22897 1456 aa17.75■□□□□ 0.43
PTPRN-203ENST00000412847 CHRNA5P30532 468 aa17.74■□□□□ 0.43
PTPRN-203ENST00000412847 HTRA3P83110 453 aa17.74■□□□□ 0.43
PTPRN-203ENST00000412847 AEBP1Q8IUX7 1158 aa17.74■□□□□ 0.43
PTPRN-203ENST00000412847 NFATC2IPQ8NCF5 419 aa17.74■□□□□ 0.43
PTPRN-203ENST00000412847 KLRG1Q96E93 195 aa17.74■□□□□ 0.43
PTPRN-203ENST00000412847 SCN7AQ01118 1682 aa17.74■□□□□ 0.43
PTPRN-203ENST00000412847 COL11A2P13942 1736 aaPredicted RBP17.73■□□□□ 0.43
PTPRN-203ENST00000412847 FER1L6Q2WGJ9 1857 aa17.73■□□□□ 0.43
PTPRN-203ENST00000412847 ARFGEF2Q9Y6D5 1785 aa17.72■□□□□ 0.43
PTPRN-203ENST00000412847 POLRMTO00411 1230 aaKnown RBP17.72■□□□□ 0.43
PTPRN-203ENST00000412847 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
PTPRN-203ENST00000412847 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
PTPRN-203ENST00000412847 SULT6B1Q6IMI4 303 aa17.71■□□□□ 0.43
PTPRN-203ENST00000412847 INTS5Q6P9B9 1019 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms