RNA–Protein interactions for RNA: ENST00000412714.1

LINC00388-201, long intergenic non-protein coding RNA 388, humanhuman

TSL 5 BASIC

Gene LINC00388, Length 663 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00388-201ENST00000412714 PLEKHO1Q53GL0 409 aaPredicted RBP17.23■□□□□ 0.35
LINC00388-201ENST00000412714 GNPATO15228 680 aa17.22■□□□□ 0.35
LINC00388-201ENST00000412714 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.35
LINC00388-201ENST00000412714 AMIGO3Q86WK7 504 aa17.22■□□□□ 0.35
LINC00388-201ENST00000412714 KNSTRNQ9Y448 316 aa17.22■□□□□ 0.35
LINC00388-201ENST00000412714 ERVV-2B6SEH9 535 aa17.21■□□□□ 0.35
LINC00388-201ENST00000412714 ITPK1Q13572 414 aa17.21■□□□□ 0.35
LINC00388-201ENST00000412714 DCAF5Q96JK2 942 aa17.21■□□□□ 0.35
LINC00388-201ENST00000412714 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
LINC00388-201ENST00000412714 AMOTQ4VCS5 1084 aa17.2■□□□□ 0.34
LINC00388-201ENST00000412714 ZNF530Q6P9A1 599 aaPredicted RBP17.2■□□□□ 0.34
LINC00388-201ENST00000412714 SMIM5Q71RC9 77 aa17.2■□□□□ 0.34
LINC00388-201ENST00000412714 RBM42Q9BTD8 480 aaKnown RBP17.19■□□□□ 0.34
LINC00388-201ENST00000412714 C1orf141Q5JVX7 400 aa17.18■□□□□ 0.34
LINC00388-201ENST00000412714 MIER1Q8N108 512 aa17.18■□□□□ 0.34
LINC00388-201ENST00000412714 KDRP35968 1356 aa17.17■□□□□ 0.34
LINC00388-201ENST00000412714 GIGYF1O75420 1035 aaPredicted RBP17.17■□□□□ 0.34
LINC00388-201ENST00000412714 CABP4P57796 275 aa17.17■□□□□ 0.34
LINC00388-201ENST00000412714 C1QTNF8P60827 252 aa17.17■□□□□ 0.34
LINC00388-201ENST00000412714 RTCBQ9Y3I0 505 aaKnown RBP17.17■□□□□ 0.34
LINC00388-201ENST00000412714 KDM6AO15550 1401 aaPredicted RBP17.16■□□□□ 0.34
LINC00388-201ENST00000412714 MTHFSP49914 203 aa17.16■□□□□ 0.34
LINC00388-201ENST00000412714 SULT6B1Q6IMI4 303 aa17.16■□□□□ 0.34
LINC00388-201ENST00000412714 AEBP1Q8IUX7 1158 aa17.16■□□□□ 0.34
LINC00388-201ENST00000412714 ZNF831Q5JPB2 1677 aa17.16■□□□□ 0.34
LINC00388-201ENST00000412714 TRAPPC3LQ5T215 181 aa17.15■□□□□ 0.34
LINC00388-201ENST00000412714 SENP3-EIF4A1A0A087X0R7 540 aa17.14■□□□□ 0.33
LINC00388-201ENST00000412714 MMP10P09238 476 aa17.13■□□□□ 0.33
LINC00388-201ENST00000412714 ADRA2BP18089 450 aa17.13■□□□□ 0.33
LINC00388-201ENST00000412714 RC3H1Q5TC82 1133 aaKnown RBP17.13■□□□□ 0.33
LINC00388-201ENST00000412714 SLC4A9Q96Q91 983 aa17.13■□□□□ 0.33
LINC00388-201ENST00000412714 CNTNAP4Q9C0A0 1308 aa17.13■□□□□ 0.33
LINC00388-201ENST00000412714 COL5A3P25940 1745 aaPredicted RBP17.13■□□□□ 0.33
LINC00388-201ENST00000412714 IL13P35225 146 aa17.12■□□□□ 0.33
LINC00388-201ENST00000412714 AMER1Q5JTC6 1135 aaPredicted RBP17.12■□□□□ 0.33
LINC00388-201ENST00000412714 WWC3Q9ULE0 1092 aa17.12■□□□□ 0.33
LINC00388-201ENST00000412714 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
LINC00388-201ENST00000412714 PTCD1O75127 700 aaKnown RBP17.11■□□□□ 0.33
LINC00388-201ENST00000412714 RFC4P35249 363 aa17.11■□□□□ 0.33
LINC00388-201ENST00000412714 NLGN1Q8N2Q7 840 aa17.11■□□□□ 0.33
LINC00388-201ENST00000412714 RPS6KA4O75676 772 aa17.1■□□□□ 0.33
LINC00388-201ENST00000412714 NFATC2IPQ8NCF5 419 aa17.1■□□□□ 0.33
LINC00388-201ENST00000412714 ARHGEF1Q92888 912 aaKnown RBP17.1■□□□□ 0.33
LINC00388-201ENST00000412714 ATP10DQ9P241 1426 aa17.1■□□□□ 0.33
LINC00388-201ENST00000412714 CICQ96RK0 1608 aaPredicted RBP17.1■□□□□ 0.33
LINC00388-201ENST00000412714 DDX10Q13206 875 aaKnown RBP17.09■□□□□ 0.33
LINC00388-201ENST00000412714 SCN11AQ9UI33 1791 aa17.09■□□□□ 0.33
LINC00388-201ENST00000412714 AKAP4Q5JQC9 854 aa17.08■□□□□ 0.32
LINC00388-201ENST00000412714 MYH14Q7Z406 1995 aaKnown RBP17.08■□□□□ 0.32
LINC00388-201ENST00000412714 KIF13BQ9NQT8 1826 aa17.07■□□□□ 0.32
LINC00388-201ENST00000412714 GYS1P13807 737 aa17.07■□□□□ 0.32
LINC00388-201ENST00000412714 GPBP1L1Q9HC44 474 aaPredicted RBP17.07■□□□□ 0.32
LINC00388-201ENST00000412714 CCDC87Q9NVE4 849 aa17.07■□□□□ 0.32
LINC00388-201ENST00000412714 PARP3Q9Y6F1 533 aa17.07■□□□□ 0.32
LINC00388-201ENST00000412714 C4AP0C0L4 1744 aa17.07■□□□□ 0.32
LINC00388-201ENST00000412714 CRKLP46109 303 aaKnown RBP17.06■□□□□ 0.32
LINC00388-201ENST00000412714 TGFB2P61812 414 aa17.06■□□□□ 0.32
LINC00388-201ENST00000412714 PXDNLA1KZ92 1463 aa17.05■□□□□ 0.32
LINC00388-201ENST00000412714 C10orf71Q711Q0 1435 aa17.05■□□□□ 0.32
LINC00388-201ENST00000412714 ADCY9O60503 1353 aa17.05■□□□□ 0.32
LINC00388-201ENST00000412714 HMOX1P09601 288 aa17.05■□□□□ 0.32
LINC00388-201ENST00000412714 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
LINC00388-201ENST00000412714 TJP1Q07157 1748 aa17.04■□□□□ 0.32
LINC00388-201ENST00000412714 DIAPH1O60610 1272 aaKnown RBP17.04■□□□□ 0.32
LINC00388-201ENST00000412714 SLC52A2Q9HAB3 445 aa17.04■□□□□ 0.32
LINC00388-201ENST00000412714 N4BP2Q86UW6 1770 aaPredicted RBP17.04■□□□□ 0.32
LINC00388-201ENST00000412714 PER1O15534 1290 aaPredicted RBP17.03■□□□□ 0.32
LINC00388-201ENST00000412714 ZNF526Q8TF50 670 aaPredicted RBP17.03■□□□□ 0.32
LINC00388-201ENST00000412714 BCS1LQ9Y276 419 aa17.03■□□□□ 0.32
LINC00388-201ENST00000412714 VIRMAQ69YN4 1812 aaKnown RBP17.03■□□□□ 0.32
LINC00388-201ENST00000412714 KIAA1551Q9HCM1 1747 aa17.02■□□□□ 0.32
LINC00388-201ENST00000412714 MRC1P22897 1456 aa17.02■□□□□ 0.32
LINC00388-201ENST00000412714 A0A0G2JLW4 131 aa17.02■□□□□ 0.32
LINC00388-201ENST00000412714 LGR6Q9HBX8 967 aa17.02■□□□□ 0.32
LINC00388-201ENST00000412714 USP42Q9H9J4 1324 aaKnown RBP17.01■□□□□ 0.31
LINC00388-201ENST00000412714 RNMTO43148 476 aaKnown RBP17.01■□□□□ 0.31
LINC00388-201ENST00000412714 SRP68Q9UHB9 627 aaKnown RBP17.01■□□□□ 0.31
LINC00388-201ENST00000412714 DPEP1P16444 411 aa17■□□□□ 0.31
LINC00388-201ENST00000412714 MTHFSDQ2M296 383 aaKnown RBP17■□□□□ 0.31
LINC00388-201ENST00000412714 DNAJC10Q8IXB1 793 aa17■□□□□ 0.31
LINC00388-201ENST00000412714 ZPR1O75312 459 aa16.99■□□□□ 0.31
LINC00388-201ENST00000412714 FCHSD2O94868 740 aa16.99■□□□□ 0.31
LINC00388-201ENST00000412714 SLC39A6Q13433 755 aa16.99■□□□□ 0.31
LINC00388-201ENST00000412714 CNGB1Q14028 1251 aaPredicted RBP16.99■□□□□ 0.31
LINC00388-201ENST00000412714 FKBP8Q14318 412 aa16.99■□□□□ 0.31
LINC00388-201ENST00000412714 INTS5Q6P9B9 1019 aaKnown RBP16.99■□□□□ 0.31
LINC00388-201ENST00000412714 NPC1L1Q9UHC9 1359 aa16.99■□□□□ 0.31
LINC00388-201ENST00000412714 BRCA1P38398 1863 aaKnown RBP16.97■□□□□ 0.31
LINC00388-201ENST00000412714 U2SURPO15042 1029 aaKnown RBP16.97■□□□□ 0.31
LINC00388-201ENST00000412714 ARHGAP27Q6ZUM4 889 aa16.97■□□□□ 0.31
LINC00388-201ENST00000412714 ADAMTS7Q9UKP4 1686 aa16.97■□□□□ 0.31
LINC00388-201ENST00000412714 SOS1Q07889 1333 aaPredicted RBP16.96■□□□□ 0.31
LINC00388-201ENST00000412714 KCPQ6ZWJ8 1503 aa16.96■□□□□ 0.31
LINC00388-201ENST00000412714 CCER2I3L3R5 266 aa16.96■□□□□ 0.31
LINC00388-201ENST00000412714 ANP32CO43423 234 aa16.96■□□□□ 0.31
LINC00388-201ENST00000412714 CYP19A1P11511 503 aaPredicted RBP16.96■□□□□ 0.31
LINC00388-201ENST00000412714 DDR1Q08345 913 aa16.96■□□□□ 0.31
LINC00388-201ENST00000412714 USPL1Q5W0Q7 1092 aa16.96■□□□□ 0.31
LINC00388-201ENST00000412714 TTC5Q8N0Z6 440 aa16.96■□□□□ 0.31
LINC00388-201ENST00000412714 COL3A1P02461 1466 aaPredicted RBP16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms