RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 ZNF526Q8TF50 670 aaPredicted RBP19.65■□□□□ 0.74
HLA-DQB2-229ENST00000411527 ADCY9O60503 1353 aa19.63■□□□□ 0.73
HLA-DQB2-229ENST00000411527 MMP10P09238 476 aa19.62■□□□□ 0.73
HLA-DQB2-229ENST00000411527 RBM42Q9BTD8 480 aaKnown RBP19.62■□□□□ 0.73
HLA-DQB2-229ENST00000411527 ERVV-2B6SEH9 535 aa19.61■□□□□ 0.73
HLA-DQB2-229ENST00000411527 TRAPPC3LQ5T215 181 aa19.61■□□□□ 0.73
HLA-DQB2-229ENST00000411527 RTCBQ9Y3I0 505 aaKnown RBP19.61■□□□□ 0.73
HLA-DQB2-229ENST00000411527 DCAF5Q96JK2 942 aa19.6■□□□□ 0.73
HLA-DQB2-229ENST00000411527 SLC4A9Q96Q91 983 aa19.6■□□□□ 0.73
HLA-DQB2-229ENST00000411527 PLEKHG2Q9H7P9 1386 aa19.59■□□□□ 0.73
HLA-DQB2-229ENST00000411527 HSP90AB1P08238 724 aaKnown RBP19.59■□□□□ 0.73
HLA-DQB2-229ENST00000411527 PLEKHO1Q53GL0 409 aaPredicted RBP19.59■□□□□ 0.73
HLA-DQB2-229ENST00000411527 NLGN1Q8N2Q7 840 aa19.59■□□□□ 0.73
HLA-DQB2-229ENST00000411527 KDRP35968 1356 aa19.58■□□□□ 0.73
HLA-DQB2-229ENST00000411527 ARHGEF1Q92888 912 aaKnown RBP19.58■□□□□ 0.72
HLA-DQB2-229ENST00000411527 PANK3Q9H999 370 aa19.58■□□□□ 0.72
HLA-DQB2-229ENST00000411527 N4BP2Q86UW6 1770 aaPredicted RBP19.57■□□□□ 0.72
HLA-DQB2-229ENST00000411527 ZNF831Q5JPB2 1677 aa19.57■□□□□ 0.72
HLA-DQB2-229ENST00000411527 CABP4P57796 275 aa19.57■□□□□ 0.72
HLA-DQB2-229ENST00000411527 RC3H1Q5TC82 1133 aaKnown RBP19.57■□□□□ 0.72
HLA-DQB2-229ENST00000411527 ZNF530Q6P9A1 599 aaPredicted RBP19.57■□□□□ 0.72
HLA-DQB2-229ENST00000411527 PCGF6Q9BYE7 350 aa19.57■□□□□ 0.72
HLA-DQB2-229ENST00000411527 KIF13BQ9NQT8 1826 aa19.57■□□□□ 0.72
HLA-DQB2-229ENST00000411527 CICQ96RK0 1608 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB2-229ENST00000411527 TGFB2P61812 414 aa19.56■□□□□ 0.72
HLA-DQB2-229ENST00000411527 COL5A3P25940 1745 aaPredicted RBP19.56■□□□□ 0.72
HLA-DQB2-229ENST00000411527 PXDNLA1KZ92 1463 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 A0A0G2JLW4 131 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 RPS6KA4O75676 772 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 HSPA6P17066 643 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 ADRA2BP18089 450 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 RFC4P35249 363 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 EIF4G2P78344 907 aaKnown RBP eCLIP19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 AMOTQ4VCS5 1084 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 KIAA1551Q9HCM1 1747 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 BCS1LQ9Y276 419 aa19.55■□□□□ 0.72
HLA-DQB2-229ENST00000411527 CLSPNQ9HAW4 1339 aa19.54■□□□□ 0.72
HLA-DQB2-229ENST00000411527 HSPA5P11021 654 aaKnown RBP19.54■□□□□ 0.72
HLA-DQB2-229ENST00000411527 MTHFSP49914 203 aa19.54■□□□□ 0.72
HLA-DQB2-229ENST00000411527 CNTNAP4Q9C0A0 1308 aa19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 KDM6AO15550 1401 aaPredicted RBP19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 PTCD1O75127 700 aaKnown RBP19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 GYS1P13807 737 aa19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 MORC1Q86VD1 984 aa19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 AEBP1Q8IUX7 1158 aa19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 CCDC87Q9NVE4 849 aa19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 PARP3Q9Y6F1 533 aa19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 MYH14Q7Z406 1995 aaKnown RBP19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 CEP350Q5VT06 3117 aa19.53■□□□□ 0.72
HLA-DQB2-229ENST00000411527 C1orf141Q5JVX7 400 aa19.52■□□□□ 0.72
HLA-DQB2-229ENST00000411527 C10orf71Q711Q0 1435 aa19.51■□□□□ 0.71
HLA-DQB2-229ENST00000411527 C4AP0C0L4 1744 aa19.51■□□□□ 0.71
HLA-DQB2-229ENST00000411527 KIF3CO14782 793 aa19.51■□□□□ 0.71
HLA-DQB2-229ENST00000411527 DPEP1P16444 411 aa19.51■□□□□ 0.71
HLA-DQB2-229ENST00000411527 ARHGAP27Q6ZUM4 889 aa19.51■□□□□ 0.71
HLA-DQB2-229ENST00000411527 NFATC2IPQ8NCF5 419 aa19.51■□□□□ 0.71
HLA-DQB2-229ENST00000411527 IFFO2Q5TF58 517 aa19.5■□□□□ 0.71
HLA-DQB2-229ENST00000411527 FCHSD2O94868 740 aa19.49■□□□□ 0.71
HLA-DQB2-229ENST00000411527 SULT6B1Q6IMI4 303 aa19.49■□□□□ 0.71
HLA-DQB2-229ENST00000411527 CRKLP46109 303 aaKnown RBP19.48■□□□□ 0.71
HLA-DQB2-229ENST00000411527 SRP68Q9UHB9 627 aaKnown RBP19.47■□□□□ 0.71
HLA-DQB2-229ENST00000411527 BRCA1P38398 1863 aaKnown RBP19.46■□□□□ 0.71
HLA-DQB2-229ENST00000411527 KNSTRNQ9Y448 316 aa19.46■□□□□ 0.71
HLA-DQB2-229ENST00000411527 SCN11AQ9UI33 1791 aa19.45■□□□□ 0.7
HLA-DQB2-229ENST00000411527 KCNA3P22001 575 aa19.45■□□□□ 0.7
HLA-DQB2-229ENST00000411527 IL13P35225 146 aa19.44■□□□□ 0.7
HLA-DQB2-229ENST00000411527 FKBP8Q14318 412 aa19.44■□□□□ 0.7
HLA-DQB2-229ENST00000411527 PIM2Q9P1W9 311 aa19.44■□□□□ 0.7
HLA-DQB2-229ENST00000411527 TJP1Q07157 1748 aa19.44■□□□□ 0.7
HLA-DQB2-229ENST00000411527 TOMM70O94826 608 aa19.43■□□□□ 0.7
HLA-DQB2-229ENST00000411527 ARFGEF1Q9Y6D6 1849 aa19.43■□□□□ 0.7
HLA-DQB2-229ENST00000411527 USP42Q9H9J4 1324 aaKnown RBP19.43■□□□□ 0.7
HLA-DQB2-229ENST00000411527 DDR1Q08345 913 aa19.42■□□□□ 0.7
HLA-DQB2-229ENST00000411527 INTS5Q6P9B9 1019 aaKnown RBP19.42■□□□□ 0.7
HLA-DQB2-229ENST00000411527 NMRK2Q9NPI5 230 aa19.42■□□□□ 0.7
HLA-DQB2-229ENST00000411527 DALRD3Q5D0E6 543 aaKnown RBP19.41■□□□□ 0.7
HLA-DQB2-229ENST00000411527 AKAP4Q5JQC9 854 aa19.41■□□□□ 0.7
HLA-DQB2-229ENST00000411527 C9orf131Q5VYM1 1079 aa19.41■□□□□ 0.7
HLA-DQB2-229ENST00000411527 LGR6Q9HBX8 967 aa19.41■□□□□ 0.7
HLA-DQB2-229ENST00000411527 APLP1P51693 650 aa19.4■□□□□ 0.7
HLA-DQB2-229ENST00000411527 DNAJC10Q8IXB1 793 aa19.4■□□□□ 0.7
HLA-DQB2-229ENST00000411527 SLC52A2Q9HAB3 445 aa19.4■□□□□ 0.7
HLA-DQB2-229ENST00000411527 ZPR1O75312 459 aa19.39■□□□□ 0.69
HLA-DQB2-229ENST00000411527 TM4SF1P30408 202 aa19.39■□□□□ 0.69
HLA-DQB2-229ENST00000411527 POLRMTO00411 1230 aaKnown RBP19.38■□□□□ 0.69
HLA-DQB2-229ENST00000411527 CHRNA5P30532 468 aa19.38■□□□□ 0.69
HLA-DQB2-229ENST00000411527 VIRMAQ69YN4 1812 aaKnown RBP19.38■□□□□ 0.69
HLA-DQB2-229ENST00000411527 ADAMTS7Q9UKP4 1686 aa19.38■□□□□ 0.69
HLA-DQB2-229ENST00000411527 RNMTO43148 476 aaKnown RBP19.37■□□□□ 0.69
HLA-DQB2-229ENST00000411527 HMOX1P09601 288 aa19.37■□□□□ 0.69
HLA-DQB2-229ENST00000411527 SLC39A6Q13433 755 aa19.37■□□□□ 0.69
HLA-DQB2-229ENST00000411527 AMER1Q5JTC6 1135 aaPredicted RBP19.37■□□□□ 0.69
HLA-DQB2-229ENST00000411527 USPL1Q5W0Q7 1092 aa19.37■□□□□ 0.69
HLA-DQB2-229ENST00000411527 SOS1Q07889 1333 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB2-229ENST00000411527 CYP19A1P11511 503 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB2-229ENST00000411527 C16orf71Q8IYS4 520 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB2-229ENST00000411527 CCER1Q8TC90 406 aaPredicted RBP19.35■□□□□ 0.69
HLA-DQB2-229ENST00000411527 RNF181Q9P0P0 153 aa19.35■□□□□ 0.69
HLA-DQB2-229ENST00000411527 SBF1O95248 1867 aa19.34■□□□□ 0.69
HLA-DQB2-229ENST00000411527 KDM2BQ8NHM5 1336 aa19.33■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms