RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 BRWD3Q6RI45 1802 aa24.6■■□□□ 1.53
LMO2-203ENST00000411482 BARGINQ6ZT62 677 aa24.59■■□□□ 1.53
LMO2-203ENST00000411482 CSB-PGBD3P0DP91 1061 aa24.58■■□□□ 1.53
LMO2-203ENST00000411482 BACH2Q9BYV9 841 aa24.58■■□□□ 1.53
LMO2-203ENST00000411482 THSD7AQ9UPZ6 1657 aa24.58■■□□□ 1.53
LMO2-203ENST00000411482 PDE4AP27815 886 aa24.57■■□□□ 1.52
LMO2-203ENST00000411482 SEPT12Q8IYM1 358 aa24.57■■□□□ 1.52
LMO2-203ENST00000411482 THRAP3Q9Y2W1 955 aaKnown RBP24.57■■□□□ 1.52
LMO2-203ENST00000411482 NCAPD2Q15021 1401 aa24.57■■□□□ 1.52
LMO2-203ENST00000411482 MCM10Q7L590 875 aa24.56■■□□□ 1.52
LMO2-203ENST00000411482 FAM208AQ9UK61 1670 aaKnown RBP24.56■■□□□ 1.52
LMO2-203ENST00000411482 NLRP2Q9NX02 1062 aa24.56■■□□□ 1.52
LMO2-203ENST00000411482 LRRC37A3O60309 1634 aa24.55■■□□□ 1.52
LMO2-203ENST00000411482 NBPF6Q5VWK0 638 aa24.54■■□□□ 1.52
LMO2-203ENST00000411482 TMEM57Q8N5G2 664 aa24.54■■□□□ 1.52
LMO2-203ENST00000411482 NBPF4Q96M43 638 aa24.54■■□□□ 1.52
LMO2-203ENST00000411482 RWDD1Q9H446 243 aaPredicted RBP24.54■■□□□ 1.52
LMO2-203ENST00000411482 BABAM1Q9NWV8 329 aa24.54■■□□□ 1.52
LMO2-203ENST00000411482 WNK3Q9BYP7 1800 aa24.54■■□□□ 1.52
LMO2-203ENST00000411482 RTF1Q92541 710 aaKnown RBP24.53■■□□□ 1.52
LMO2-203ENST00000411482 ZBTB40Q9NUA8 1239 aa24.53■■□□□ 1.52
LMO2-203ENST00000411482 DISP2A7MBM2 1401 aa24.52■■□□□ 1.52
LMO2-203ENST00000411482 GNAT3A8MTJ3 354 aa24.51■■□□□ 1.51
LMO2-203ENST00000411482 HDAC1Q13547 482 aaPredicted RBP24.51■■□□□ 1.51
LMO2-203ENST00000411482 ABCC4O15439 1325 aa24.51■■□□□ 1.51
LMO2-203ENST00000411482 SKAP1Q86WV1 359 aa24.51■■□□□ 1.51
LMO2-203ENST00000411482 CHMP4BQ9H444 224 aaKnown RBP24.5■■□□□ 1.51
LMO2-203ENST00000411482 PARP4Q9UKK3 1724 aaKnown RBP24.5■■□□□ 1.51
LMO2-203ENST00000411482 MAP3K5Q99683 1374 aa24.49■■□□□ 1.51
LMO2-203ENST00000411482 ITPRIPQ8IWB1 547 aa24.49■■□□□ 1.51
LMO2-203ENST00000411482 API5Q9BZZ5 524 aaKnown RBP24.49■■□□□ 1.51
LMO2-203ENST00000411482 ELL2O00472 640 aaPredicted RBP24.48■■□□□ 1.51
LMO2-203ENST00000411482 SOS1Q07889 1333 aaPredicted RBP24.47■■□□□ 1.51
LMO2-203ENST00000411482 USHBP1Q8N6Y0 703 aa24.46■■□□□ 1.51
LMO2-203ENST00000411482 IL17REQ8NFR9 667 aa24.45■■□□□ 1.51
LMO2-203ENST00000411482 EP400Q96L91 3159 aa24.45■■□□□ 1.5
LMO2-203ENST00000411482 A0A0G2JS52 829 aa24.45■■□□□ 1.5
LMO2-203ENST00000411482 ZBTB7BO15156 539 aaPredicted RBP24.45■■□□□ 1.5
LMO2-203ENST00000411482 MYT1Q01538 1121 aa24.45■■□□□ 1.5
LMO2-203ENST00000411482 CDCA7Q9BWT1 371 aaPredicted RBP24.45■■□□□ 1.5
LMO2-203ENST00000411482 CEMIPQ8WUJ3 1361 aa24.44■■□□□ 1.5
LMO2-203ENST00000411482 KRT27Q7Z3Y8 459 aa24.44■■□□□ 1.5
LMO2-203ENST00000411482 IL2RBP14784 551 aa24.43■■□□□ 1.5
LMO2-203ENST00000411482 TSPYL4Q9UJ04 414 aa24.43■■□□□ 1.5
LMO2-203ENST00000411482 FAM161AQ3B820 660 aa24.42■■□□□ 1.5
LMO2-203ENST00000411482 KRT24Q2M2I5 525 aa24.41■■□□□ 1.5
LMO2-203ENST00000411482 SMC5Q8IY18 1101 aa24.41■■□□□ 1.5
LMO2-203ENST00000411482 PTPRCP08575 1304 aa24.41■■□□□ 1.5
LMO2-203ENST00000411482 TAF7Q15545 349 aaPredicted RBP24.4■■□□□ 1.5
LMO2-203ENST00000411482 FAM182BQ5T319 152 aa24.4■■□□□ 1.5
LMO2-203ENST00000411482 INTS3Q68E01 1043 aaKnown RBP24.4■■□□□ 1.5
LMO2-203ENST00000411482 MEGF6O75095 1541 aa24.4■■□□□ 1.5
LMO2-203ENST00000411482 MSH5O43196 834 aa24.4■■□□□ 1.5
LMO2-203ENST00000411482 DDB1Q16531 1140 aa24.4■■□□□ 1.5
LMO2-203ENST00000411482 AMOTQ4VCS5 1084 aa24.4■■□□□ 1.5
LMO2-203ENST00000411482 C8orf34Q49A92 452 aa24.39■■□□□ 1.49
LMO2-203ENST00000411482 PDZRN3Q9UPQ7 1066 aa24.39■■□□□ 1.49
LMO2-203ENST00000411482 EXOC5O00471 708 aa24.38■■□□□ 1.49
LMO2-203ENST00000411482 RGS3P49796 1198 aa24.38■■□□□ 1.49
LMO2-203ENST00000411482 PLEKHG2Q9H7P9 1386 aa24.37■■□□□ 1.49
LMO2-203ENST00000411482 SOCS7O14512 581 aa24.37■■□□□ 1.49
LMO2-203ENST00000411482 PLEKHO1Q53GL0 409 aaPredicted RBP24.37■■□□□ 1.49
LMO2-203ENST00000411482 MARCH10Q8NA82 808 aaPredicted RBP24.37■■□□□ 1.49
LMO2-203ENST00000411482 MIS18AQ9NYP9 233 aa24.37■■□□□ 1.49
LMO2-203ENST00000411482 OVOS2A0A0G2JMS6 1433 aa24.36■■□□□ 1.49
LMO2-203ENST00000411482 SHANK3Q9BYB0 1731 aa24.36■■□□□ 1.49
LMO2-203ENST00000411482 AKAP4Q5JQC9 854 aa24.35■■□□□ 1.49
LMO2-203ENST00000411482 TNS2Q63HR2 1409 aa24.35■■□□□ 1.49
LMO2-203ENST00000411482 ANP32AP39687 249 aaKnown RBP24.35■■□□□ 1.49
LMO2-203ENST00000411482 RAPGEF4Q8WZA2 1011 aa24.34■■□□□ 1.49
LMO2-203ENST00000411482 UPF1Q92900 1129 aaKnown RBP eCLIP24.33■■□□□ 1.491e-7■□□□□ 10.5
LMO2-203ENST00000411482 TATP17735 454 aaPredicted RBP24.32■■□□□ 1.48
LMO2-203ENST00000411482 CACNA1FO60840 1977 aa24.32■■□□□ 1.48
LMO2-203ENST00000411482 SLC4A2P04920 1241 aa24.31■■□□□ 1.48
LMO2-203ENST00000411482 ZCRB1Q8TBF4 217 aaKnown RBP24.31■■□□□ 1.48
LMO2-203ENST00000411482 IPO9Q96P70 1041 aaKnown RBP24.31■■□□□ 1.48
LMO2-203ENST00000411482 PKD1L3Q7Z443 1732 aa24.3■■□□□ 1.48
LMO2-203ENST00000411482 SBF2Q86WG5 1849 aa24.3■■□□□ 1.48
LMO2-203ENST00000411482 ADAMTS7Q9UKP4 1686 aa24.29■■□□□ 1.48
LMO2-203ENST00000411482 HOXB7P09629 217 aa24.29■■□□□ 1.48
LMO2-203ENST00000411482 CCDC30Q5VVM6 783 aa24.29■■□□□ 1.48
LMO2-203ENST00000411482 ZNF530Q6P9A1 599 aaPredicted RBP24.29■■□□□ 1.48
LMO2-203ENST00000411482 FAM196AQ6ZSG2 479 aa24.29■■□□□ 1.48
LMO2-203ENST00000411482 LGR6Q9HBX8 967 aa24.28■■□□□ 1.48
LMO2-203ENST00000411482 BCL9O00512 1426 aa24.27■■□□□ 1.48
LMO2-203ENST00000411482 KDM3BQ7LBC6 1761 aa24.27■■□□□ 1.48
LMO2-203ENST00000411482 KAT6BQ8WYB5 2073 aa24.27■■□□□ 1.48
LMO2-203ENST00000411482 NUCB1Q02818 461 aa24.27■■□□□ 1.48
LMO2-203ENST00000411482 DDX54Q8TDD1 881 aaKnown RBP24.27■■□□□ 1.48
LMO2-203ENST00000411482 GCC1Q96CN9 775 aa24.26■■□□□ 1.47
LMO2-203ENST00000411482 CHMP4AQ9BY43 222 aa24.26■■□□□ 1.47
LMO2-203ENST00000411482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.26■■□□□ 1.47
LMO2-203ENST00000411482 VIRMAQ69YN4 1812 aaKnown RBP24.26■■□□□ 1.47
LMO2-203ENST00000411482 CYP27B1O15528 508 aa24.25■■□□□ 1.47
LMO2-203ENST00000411482 RNMTO43148 476 aaKnown RBP24.25■■□□□ 1.47
LMO2-203ENST00000411482 SIRT2Q8IXJ6 389 aa24.25■■□□□ 1.47
LMO2-203ENST00000411482 STK31Q9BXU1 1019 aa24.25■■□□□ 1.47
LMO2-203ENST00000411482 EIF4A1P60842 406 aaKnown RBP24.25■■□□□ 1.47
LMO2-203ENST00000411482 G2E3Q7L622 706 aa24.24■■□□□ 1.47
LMO2-203ENST00000411482 C1orf141Q5JVX7 400 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms