RNA–Protein interactions for RNA: ENST00000409542.5

CHRNA1-205, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,460 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-205ENST00000409542 TMOD3Q9NYL9 352 aa17.54■□□□□ 0.4
CHRNA1-205ENST00000409542 WASHC2AQ641Q2 1341 aa17.53■□□□□ 0.4
CHRNA1-205ENST00000409542 PHKG2P15735 406 aa17.53■□□□□ 0.4
CHRNA1-205ENST00000409542 KIAA1551Q9HCM1 1747 aa17.53■□□□□ 0.4
CHRNA1-205ENST00000409542 ANKRD26Q9UPS8 1709 aa17.53■□□□□ 0.4
CHRNA1-205ENST00000409542 MMP10P09238 476 aa17.52■□□□□ 0.4
CHRNA1-205ENST00000409542 SLC4A9Q96Q91 983 aa17.52■□□□□ 0.4
CHRNA1-205ENST00000409542 N4BP2Q86UW6 1770 aaPredicted RBP17.52■□□□□ 0.39
CHRNA1-205ENST00000409542 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
CHRNA1-205ENST00000409542 POLKQ9UBT6 870 aa17.51■□□□□ 0.39
CHRNA1-205ENST00000409542 CENPBP07199 599 aaPredicted RBP17.5■□□□□ 0.39
CHRNA1-205ENST00000409542 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
CHRNA1-205ENST00000409542 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHRNA1-205ENST00000409542 TIMELESSQ9UNS1 1208 aa17.5■□□□□ 0.39
CHRNA1-205ENST00000409542 CICQ96RK0 1608 aaPredicted RBP17.5■□□□□ 0.39
CHRNA1-205ENST00000409542 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
CHRNA1-205ENST00000409542 CDCA8Q53HL2 280 aa17.5■□□□□ 0.39
CHRNA1-205ENST00000409542 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
CHRNA1-205ENST00000409542 KDRP35968 1356 aa17.48■□□□□ 0.39
CHRNA1-205ENST00000409542 EIF4A2Q14240 407 aaKnown RBP17.48■□□□□ 0.39
CHRNA1-205ENST00000409542 BCS1LQ9Y276 419 aa17.47■□□□□ 0.39
CHRNA1-205ENST00000409542 TRAPPC3LQ5T215 181 aa17.46■□□□□ 0.39
CHRNA1-205ENST00000409542 ARHGEF1Q92888 912 aaKnown RBP17.46■□□□□ 0.39
CHRNA1-205ENST00000409542 DPEP1P16444 411 aa17.45■□□□□ 0.38
CHRNA1-205ENST00000409542 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
CHRNA1-205ENST00000409542 RBM42Q9BTD8 480 aaKnown RBP17.45■□□□□ 0.38
CHRNA1-205ENST00000409542 RTCBQ9Y3I0 505 aaKnown RBP17.45■□□□□ 0.38
CHRNA1-205ENST00000409542 C10orf71Q711Q0 1435 aa17.45■□□□□ 0.38
CHRNA1-205ENST00000409542 GYS1P13807 737 aa17.44■□□□□ 0.38
CHRNA1-205ENST00000409542 TGFB2P61812 414 aa17.44■□□□□ 0.38
CHRNA1-205ENST00000409542 KCNA3P22001 575 aa17.44■□□□□ 0.38
CHRNA1-205ENST00000409542 ARHGAP27Q6ZUM4 889 aa17.44■□□□□ 0.38
CHRNA1-205ENST00000409542 MIER1Q8N108 512 aa17.44■□□□□ 0.38
CHRNA1-205ENST00000409542 DNAJC5GQ8N7S2 189 aa17.44■□□□□ 0.38
CHRNA1-205ENST00000409542 NMRK2Q9NPI5 230 aa17.44■□□□□ 0.38
CHRNA1-205ENST00000409542 MYH14Q7Z406 1995 aaKnown RBP17.43■□□□□ 0.38
CHRNA1-205ENST00000409542 NLGN1Q8N2Q7 840 aa17.43■□□□□ 0.38
CHRNA1-205ENST00000409542 COL5A3P25940 1745 aaPredicted RBP17.42■□□□□ 0.38
CHRNA1-205ENST00000409542 ERVV-2B6SEH9 535 aa17.42■□□□□ 0.38
CHRNA1-205ENST00000409542 RC3H1Q5TC82 1133 aaKnown RBP17.42■□□□□ 0.38
CHRNA1-205ENST00000409542 KDM6AO15550 1401 aaPredicted RBP17.42■□□□□ 0.38
CHRNA1-205ENST00000409542 C4AP0C0L4 1744 aa17.42■□□□□ 0.38
CHRNA1-205ENST00000409542 BRCA1P38398 1863 aaKnown RBP17.42■□□□□ 0.38
CHRNA1-205ENST00000409542 ZNF831Q5JPB2 1677 aa17.41■□□□□ 0.38
CHRNA1-205ENST00000409542 RPS6KA4O75676 772 aa17.41■□□□□ 0.38
CHRNA1-205ENST00000409542 FCHSD2O94868 740 aa17.41■□□□□ 0.38
CHRNA1-205ENST00000409542 CNTNAP4Q9C0A0 1308 aa17.4■□□□□ 0.38
CHRNA1-205ENST00000409542 TOMM70O94826 608 aa17.4■□□□□ 0.38
CHRNA1-205ENST00000409542 APLP1P51693 650 aa17.4■□□□□ 0.38
CHRNA1-205ENST00000409542 CCDC87Q9NVE4 849 aa17.4■□□□□ 0.38
CHRNA1-205ENST00000409542 RFC4P35249 363 aa17.39■□□□□ 0.37
CHRNA1-205ENST00000409542 DCAF5Q96JK2 942 aa17.39■□□□□ 0.37
CHRNA1-205ENST00000409542 POLR3GLQ9BT43 218 aa17.39■□□□□ 0.37
CHRNA1-205ENST00000409542 SRP68Q9UHB9 627 aaKnown RBP17.39■□□□□ 0.37
CHRNA1-205ENST00000409542 ADRA2BP18089 450 aa17.38■□□□□ 0.37
CHRNA1-205ENST00000409542 PARP3Q9Y6F1 533 aa17.38■□□□□ 0.37
CHRNA1-205ENST00000409542 CABP4P57796 275 aa17.37■□□□□ 0.37
CHRNA1-205ENST00000409542 HTRA3P83110 453 aa17.37■□□□□ 0.37
CHRNA1-205ENST00000409542 C9orf131Q5VYM1 1079 aa17.37■□□□□ 0.37
CHRNA1-205ENST00000409542 ZNF530Q6P9A1 599 aaPredicted RBP17.37■□□□□ 0.37
CHRNA1-205ENST00000409542 AEBP1Q8IUX7 1158 aa17.37■□□□□ 0.37
CHRNA1-205ENST00000409542 PTCD1O75127 700 aaKnown RBP17.37■□□□□ 0.37
CHRNA1-205ENST00000409542 FKBP8Q14318 412 aa17.37■□□□□ 0.37
CHRNA1-205ENST00000409542 PLEKHO1Q53GL0 409 aaPredicted RBP17.37■□□□□ 0.37
CHRNA1-205ENST00000409542 CRKLP46109 303 aaKnown RBP17.36■□□□□ 0.37
CHRNA1-205ENST00000409542 DDR1Q08345 913 aa17.36■□□□□ 0.37
CHRNA1-205ENST00000409542 PLEKHG2Q9H7P9 1386 aa17.35■□□□□ 0.37
CHRNA1-205ENST00000409542 ARFGEF1Q9Y6D6 1849 aa17.35■□□□□ 0.37
CHRNA1-205ENST00000409542 HSP90AB1P08238 724 aaKnown RBP17.35■□□□□ 0.37
CHRNA1-205ENST00000409542 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
CHRNA1-205ENST00000409542 CHRNA5P30532 468 aa17.34■□□□□ 0.37
CHRNA1-205ENST00000409542 MTHFSP49914 203 aa17.34■□□□□ 0.37
CHRNA1-205ENST00000409542 TJP1Q07157 1748 aa17.33■□□□□ 0.37
CHRNA1-205ENST00000409542 PIM2Q9P1W9 311 aa17.33■□□□□ 0.37
CHRNA1-205ENST00000409542 WDR90Q96KV7 1748 aa17.33■□□□□ 0.36
CHRNA1-205ENST00000409542 USP42Q9H9J4 1324 aaKnown RBP17.33■□□□□ 0.36
CHRNA1-205ENST00000409542 KCPQ6ZWJ8 1503 aa17.32■□□□□ 0.36
CHRNA1-205ENST00000409542 INTS5Q6P9B9 1019 aaKnown RBP17.32■□□□□ 0.36
CHRNA1-205ENST00000409542 RBM46Q8TBY0 533 aaKnown RBP17.32■□□□□ 0.36
CHRNA1-205ENST00000409542 PANK3Q9H999 370 aa17.32■□□□□ 0.36
CHRNA1-205ENST00000409542 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
CHRNA1-205ENST00000409542 AMOTQ4VCS5 1084 aa17.31■□□□□ 0.36
CHRNA1-205ENST00000409542 TM4SF1P30408 202 aa17.31■□□□□ 0.36
CHRNA1-205ENST00000409542 DALRD3Q5D0E6 543 aaKnown RBP17.31■□□□□ 0.36
CHRNA1-205ENST00000409542 RRAGCQ9HB90 399 aa17.31■□□□□ 0.36
CHRNA1-205ENST00000409542 RNF181Q9P0P0 153 aa17.31■□□□□ 0.36
CHRNA1-205ENST00000409542 POLRMTO00411 1230 aaKnown RBP17.3■□□□□ 0.36
CHRNA1-205ENST00000409542 SBF1O95248 1867 aa17.29■□□□□ 0.36
CHRNA1-205ENST00000409542 C1orf141Q5JVX7 400 aa17.29■□□□□ 0.36
CHRNA1-205ENST00000409542 SULT6B1Q6IMI4 303 aa17.29■□□□□ 0.36
CHRNA1-205ENST00000409542 USPL1Q5W0Q7 1092 aa17.28■□□□□ 0.36
CHRNA1-205ENST00000409542 DNAJC10Q8IXB1 793 aa17.28■□□□□ 0.36
CHRNA1-205ENST00000409542 PRELPP51888 382 aa17.27■□□□□ 0.36
CHRNA1-205ENST00000409542 RASSF7Q02833 373 aa17.27■□□□□ 0.36
CHRNA1-205ENST00000409542 C16orf71Q8IYS4 520 aaPredicted RBP17.27■□□□□ 0.36
CHRNA1-205ENST00000409542 KLRG1Q96E93 195 aa17.27■□□□□ 0.36
CHRNA1-205ENST00000409542 LGR6Q9HBX8 967 aa17.27■□□□□ 0.36
CHRNA1-205ENST00000409542 SCN11AQ9UI33 1791 aa17.27■□□□□ 0.35
CHRNA1-205ENST00000409542 IL13P35225 146 aa17.26■□□□□ 0.35
CHRNA1-205ENST00000409542 COL13A1Q5TAT6 717 aaPredicted RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms