RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 NECTIN2Q92692 538 aa20.18■□□□□ 0.82
SHANK2-204ENST00000409530 ADAMTS7Q9UKP4 1686 aa20.17■□□□□ 0.82
SHANK2-204ENST00000409530 DCAF5Q96JK2 942 aa20.17■□□□□ 0.82
SHANK2-204ENST00000409530 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.17■□□□□ 0.82
SHANK2-204ENST00000409530 TOGARAM1Q9Y4F4 1720 aa20.17■□□□□ 0.82
SHANK2-204ENST00000409530 SLC39A6Q13433 755 aa20.17■□□□□ 0.82
SHANK2-204ENST00000409530 TNS2Q63HR2 1409 aa20.16■□□□□ 0.82
SHANK2-204ENST00000409530 EXOC5O00471 708 aa20.16■□□□□ 0.82
SHANK2-204ENST00000409530 VPS72Q15906 364 aa20.16■□□□□ 0.82
SHANK2-204ENST00000409530 DDB1Q16531 1140 aa20.16■□□□□ 0.82
SHANK2-204ENST00000409530 C20orf194Q5TEA3 1177 aa20.16■□□□□ 0.82
SHANK2-204ENST00000409530 SSH1Q8WYL5 1049 aa20.16■□□□□ 0.82
SHANK2-204ENST00000409530 CABP4P57796 275 aa20.15■□□□□ 0.82
SHANK2-204ENST00000409530 SLC52A2Q9HAB3 445 aa20.15■□□□□ 0.82
SHANK2-204ENST00000409530 HSP90AB1P08238 724 aaKnown RBP20.15■□□□□ 0.82
SHANK2-204ENST00000409530 RNF123Q5XPI4 1314 aa20.14■□□□□ 0.81
SHANK2-204ENST00000409530 VAMP4O75379 141 aa20.14■□□□□ 0.81
SHANK2-204ENST00000409530 SYTL4Q96C24 671 aaPredicted RBP20.14■□□□□ 0.81
SHANK2-204ENST00000409530 THRAP3Q9Y2W1 955 aaKnown RBP20.14■□□□□ 0.81
SHANK2-204ENST00000409530 TNNQ9UQP3 1299 aa20.13■□□□□ 0.81
SHANK2-204ENST00000409530 PLEKHG2Q9H7P9 1386 aa20.13■□□□□ 0.81
SHANK2-204ENST00000409530 DOT1LQ8TEK3 1739 aa20.12■□□□□ 0.81
SHANK2-204ENST00000409530 GLI3P10071 1580 aa20.12■□□□□ 0.81
SHANK2-204ENST00000409530 CLUAP1Q96AJ1 413 aa20.12■□□□□ 0.81
SHANK2-204ENST00000409530 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.11■□□□□ 0.81
SHANK2-204ENST00000409530 MRC1P22897 1456 aa20.11■□□□□ 0.81
SHANK2-204ENST00000409530 CT47B1P0C2W7 299 aaPredicted RBP20.11■□□□□ 0.81
SHANK2-204ENST00000409530 EIF2S2P20042 333 aaKnown RBP20.09■□□□□ 0.81
SHANK2-204ENST00000409530 BARGINQ6ZT62 677 aa20.09■□□□□ 0.81
SHANK2-204ENST00000409530 ACSBG1Q96GR2 724 aa20.09■□□□□ 0.81
SHANK2-204ENST00000409530 CDCA7Q9BWT1 371 aaPredicted RBP20.09■□□□□ 0.81
SHANK2-204ENST00000409530 PRAMEF22A3QJZ6 481 aa20.09■□□□□ 0.81
SHANK2-204ENST00000409530 EIF4A1P60842 406 aaKnown RBP20.09■□□□□ 0.81
SHANK2-204ENST00000409530 FAM182BQ5T319 152 aa20.09■□□□□ 0.81
SHANK2-204ENST00000409530 TTC5Q8N0Z6 440 aa20.09■□□□□ 0.81
SHANK2-204ENST00000409530 FBXO41Q8TF61 875 aa20.09■□□□□ 0.81
SHANK2-204ENST00000409530 ITGB4P16144 1822 aa20.09■□□□□ 0.81
SHANK2-204ENST00000409530 ZNF790Q6PG37 636 aa20.08■□□□□ 0.8
SHANK2-204ENST00000409530 EXOC6Q8TAG9 804 aa20.08■□□□□ 0.8
SHANK2-204ENST00000409530 PANK1Q8TE04 598 aa20.08■□□□□ 0.8
SHANK2-204ENST00000409530 GJD4Q96KN9 370 aaPredicted RBP20.08■□□□□ 0.8
SHANK2-204ENST00000409530 CRBNQ96SW2 442 aa20.08■□□□□ 0.8
SHANK2-204ENST00000409530 TMOD3Q9NYL9 352 aa20.08■□□□□ 0.8
SHANK2-204ENST00000409530 NOB1Q9ULX3 412 aaKnown RBP20.08■□□□□ 0.8
SHANK2-204ENST00000409530 C5P01031 1676 aa20.07■□□□□ 0.8
SHANK2-204ENST00000409530 MARCH10Q8NA82 808 aaPredicted RBP20.07■□□□□ 0.8
SHANK2-204ENST00000409530 QTRT2Q9H974 415 aaKnown RBP20.07■□□□□ 0.8
SHANK2-204ENST00000409530 TRPC5Q9UL62 973 aaPredicted RBP20.07■□□□□ 0.8
SHANK2-204ENST00000409530 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
SHANK2-204ENST00000409530 ATRNO75882 1429 aa20.06■□□□□ 0.8
SHANK2-204ENST00000409530 HDGFL1Q5TGJ6 251 aa20.05■□□□□ 0.8
SHANK2-204ENST00000409530 BABAM1Q9NWV8 329 aa20.05■□□□□ 0.8
SHANK2-204ENST00000409530 PTCD1O75127 700 aaKnown RBP20.05■□□□□ 0.8
SHANK2-204ENST00000409530 ALDH1L2Q3SY69 923 aa20.05■□□□□ 0.8
SHANK2-204ENST00000409530 EP400Q96L91 3159 aa20.04■□□□□ 0.8
SHANK2-204ENST00000409530 THSD7AQ9UPZ6 1657 aa20.04■□□□□ 0.8
SHANK2-204ENST00000409530 ERVV-2B6SEH9 535 aa20.04■□□□□ 0.8
SHANK2-204ENST00000409530 FTSJ3Q8IY81 847 aaKnown RBP20.04■□□□□ 0.8
SHANK2-204ENST00000409530 MRPL50Q8N5N7 158 aaKnown RBP20.04■□□□□ 0.8
SHANK2-204ENST00000409530 ZNF496Q96IT1 587 aaPredicted RBP20.04■□□□□ 0.8
SHANK2-204ENST00000409530 KIF16BQ96L93 1317 aa20.03■□□□□ 0.8
SHANK2-204ENST00000409530 ZKSCAN2Q63HK3 967 aa20.03■□□□□ 0.8
SHANK2-204ENST00000409530 ANXA1P04083 346 aa20.03■□□□□ 0.8
SHANK2-204ENST00000409530 RLBP1P12271 317 aa20.03■□□□□ 0.8
SHANK2-204ENST00000409530 COG6Q9Y2V7 657 aa20.03■□□□□ 0.8
SHANK2-204ENST00000409530 SLC4A2P04920 1241 aa20.02■□□□□ 0.8
SHANK2-204ENST00000409530 TRIM27P14373 513 aa20.02■□□□□ 0.8
SHANK2-204ENST00000409530 PRIM1P49642 420 aaKnown RBP20.02■□□□□ 0.8
SHANK2-204ENST00000409530 STK31Q9BXU1 1019 aa20.02■□□□□ 0.8
SHANK2-204ENST00000409530 PAPPAQ13219 1627 aa20.02■□□□□ 0.79
SHANK2-204ENST00000409530 PIGBQ92521 554 aa20.02■□□□□ 0.79
SHANK2-204ENST00000409530 ZNF428Q96B54 188 aa20.01■□□□□ 0.79
SHANK2-204ENST00000409530 PIP4K2AP48426 406 aaPredicted RBP20■□□□□ 0.79
SHANK2-204ENST00000409530 ASAP1Q9ULH1 1129 aa20■□□□□ 0.79
SHANK2-204ENST00000409530 GIGYF1O75420 1035 aaPredicted RBP20■□□□□ 0.79
SHANK2-204ENST00000409530 CCDC30Q5VVM6 783 aa20■□□□□ 0.79
SHANK2-204ENST00000409530 G2E3Q7L622 706 aa20■□□□□ 0.79
SHANK2-204ENST00000409530 SEPT12Q8IYM1 358 aa20■□□□□ 0.79
SHANK2-204ENST00000409530 CHPF2Q9P2E5 772 aa20■□□□□ 0.79
SHANK2-204ENST00000409530 ATF7IPQ6VMQ6 1270 aa19.99■□□□□ 0.79
SHANK2-204ENST00000409530 FMNL2Q96PY5 1086 aa19.99■□□□□ 0.79
SHANK2-204ENST00000409530 UBR2Q8IWV8 1755 aa19.99■□□□□ 0.79
SHANK2-204ENST00000409530 RBM42Q9BTD8 480 aaKnown RBP19.99■□□□□ 0.79
SHANK2-204ENST00000409530 KCNQ2O43526 872 aa19.98■□□□□ 0.79
SHANK2-204ENST00000409530 B4GALNT3Q6L9W6 998 aa19.98■□□□□ 0.79
SHANK2-204ENST00000409530 KCPQ6ZWJ8 1503 aa19.98■□□□□ 0.79
SHANK2-204ENST00000409530 ITPRIPQ8IWB1 547 aa19.97■□□□□ 0.79
SHANK2-204ENST00000409530 DZIP1LQ8IYY4 767 aaKnown RBP19.97■□□□□ 0.79
SHANK2-204ENST00000409530 BCL9O00512 1426 aa19.97■□□□□ 0.79
SHANK2-204ENST00000409530 IPO8O15397 1037 aaKnown RBP19.96■□□□□ 0.79
SHANK2-204ENST00000409530 BRWD3Q6RI45 1802 aa19.96■□□□□ 0.79
SHANK2-204ENST00000409530 PROSER3Q2NL68 480 aa19.96■□□□□ 0.79
SHANK2-204ENST00000409530 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
SHANK2-204ENST00000409530 LAMB4A4D0S4 1761 aa19.95■□□□□ 0.78
SHANK2-204ENST00000409530 MYL6BP14649 208 aa19.95■□□□□ 0.78
SHANK2-204ENST00000409530 ZNF772Q68DY9 489 aaPredicted RBP19.95■□□□□ 0.78
SHANK2-204ENST00000409530 ATG3Q9NT62 314 aa19.95■□□□□ 0.78
SHANK2-204ENST00000409530 USP16Q9Y5T5 823 aa19.95■□□□□ 0.78
SHANK2-204ENST00000409530 FKBP5Q13451 457 aaPredicted RBP19.94■□□□□ 0.78
SHANK2-204ENST00000409530 TMEM57Q8N5G2 664 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms