RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 FYB1O15117 783 aa18.13■□□□□ 0.49
CHRNA1-203ENST00000409219 TGFB2P61812 414 aa18.13■□□□□ 0.49
CHRNA1-203ENST00000409219 A0A0G2JLW4 131 aa18.12■□□□□ 0.49
CHRNA1-203ENST00000409219 CAPN15O75808 1086 aa18.12■□□□□ 0.49
CHRNA1-203ENST00000409219 KIF24Q5T7B8 1368 aa18.11■□□□□ 0.49
CHRNA1-203ENST00000409219 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
CHRNA1-203ENST00000409219 NKX1-1Q15270 411 aaPredicted RBP18.11■□□□□ 0.49
CHRNA1-203ENST00000409219 ARHGAP27Q6ZUM4 889 aa18.11■□□□□ 0.49
CHRNA1-203ENST00000409219 KCPQ6ZWJ8 1503 aa18.1■□□□□ 0.49
CHRNA1-203ENST00000409219 ASAP1Q9ULH1 1129 aa18.1■□□□□ 0.49
CHRNA1-203ENST00000409219 TNRC6CQ9HCJ0 1690 aaKnown RBP18.09■□□□□ 0.49
CHRNA1-203ENST00000409219 COL5A3P25940 1745 aaPredicted RBP18.09■□□□□ 0.49
CHRNA1-203ENST00000409219 ANKRD26Q9UPS8 1709 aa18.09■□□□□ 0.49
CHRNA1-203ENST00000409219 ATP6V1AP38606 617 aa18.09■□□□□ 0.49
CHRNA1-203ENST00000409219 KDRP35968 1356 aa18.09■□□□□ 0.49
CHRNA1-203ENST00000409219 FCHSD2O94868 740 aa18.08■□□□□ 0.49
CHRNA1-203ENST00000409219 DPEP1P16444 411 aa18.08■□□□□ 0.49
CHRNA1-203ENST00000409219 FSTL1Q12841 308 aa18.08■□□□□ 0.49
CHRNA1-203ENST00000409219 TMOD3Q9NYL9 352 aa18.08■□□□□ 0.49
CHRNA1-203ENST00000409219 ZNF831Q5JPB2 1677 aa18.08■□□□□ 0.49
CHRNA1-203ENST00000409219 C9orf131Q5VYM1 1079 aa18.07■□□□□ 0.48
CHRNA1-203ENST00000409219 C16orf71Q8IYS4 520 aaPredicted RBP18.07■□□□□ 0.48
CHRNA1-203ENST00000409219 TNS4Q8IZW8 715 aa18.07■□□□□ 0.48
CHRNA1-203ENST00000409219 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
CHRNA1-203ENST00000409219 TMF1P82094 1093 aa18.06■□□□□ 0.48
CHRNA1-203ENST00000409219 NLGN1Q8N2Q7 840 aa18.06■□□□□ 0.48
CHRNA1-203ENST00000409219 CCDC87Q9NVE4 849 aa18.06■□□□□ 0.48
CHRNA1-203ENST00000409219 SPG7Q9UQ90 795 aa18.06■□□□□ 0.48
CHRNA1-203ENST00000409219 EMILIN1Q9Y6C2 1016 aa18.06■□□□□ 0.48
CHRNA1-203ENST00000409219 PRELPP51888 382 aa18.05■□□□□ 0.48
CHRNA1-203ENST00000409219 ATG3Q9NT62 314 aa18.05■□□□□ 0.48
CHRNA1-203ENST00000409219 RTCBQ9Y3I0 505 aaKnown RBP18.05■□□□□ 0.48
CHRNA1-203ENST00000409219 SBF1O95248 1867 aa18.05■□□□□ 0.48
CHRNA1-203ENST00000409219 KCNA3P22001 575 aa18.04■□□□□ 0.48
CHRNA1-203ENST00000409219 TRAPPC3LQ5T215 181 aa18.04■□□□□ 0.48
CHRNA1-203ENST00000409219 TONSLQ96HA7 1378 aa18.03■□□□□ 0.48
CHRNA1-203ENST00000409219 KDM2BQ8NHM5 1336 aa18.03■□□□□ 0.48
CHRNA1-203ENST00000409219 GYS1P13807 737 aa18.03■□□□□ 0.48
CHRNA1-203ENST00000409219 SLC4A9Q96Q91 983 aa18.03■□□□□ 0.48
CHRNA1-203ENST00000409219 MYH14Q7Z406 1995 aaKnown RBP18.03■□□□□ 0.48
CHRNA1-203ENST00000409219 PHKG2P15735 406 aa18.02■□□□□ 0.48
CHRNA1-203ENST00000409219 ARHGEF1Q92888 912 aaKnown RBP18.02■□□□□ 0.48
CHRNA1-203ENST00000409219 DCAF5Q96JK2 942 aa18.01■□□□□ 0.47
CHRNA1-203ENST00000409219 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.01■□□□□ 0.47
CHRNA1-203ENST00000409219 RNF181Q9P0P0 153 aa18.01■□□□□ 0.47
CHRNA1-203ENST00000409219 PARP3Q9Y6F1 533 aa18.01■□□□□ 0.47
CHRNA1-203ENST00000409219 ADRA2BP18089 450 aa18.01■□□□□ 0.47
CHRNA1-203ENST00000409219 RRAGCQ9HB90 399 aa18.01■□□□□ 0.47
CHRNA1-203ENST00000409219 CNTNAP4Q9C0A0 1308 aa18■□□□□ 0.47
CHRNA1-203ENST00000409219 SLC24A1O60721 1099 aa18■□□□□ 0.47
CHRNA1-203ENST00000409219 IFNL2Q8IZJ0 200 aa18■□□□□ 0.47
CHRNA1-203ENST00000409219 PIM2Q9P1W9 311 aa18■□□□□ 0.47
CHRNA1-203ENST00000409219 RC3H1Q5TC82 1133 aaKnown RBP17.99■□□□□ 0.47
CHRNA1-203ENST00000409219 EYA1Q99502 592 aa17.99■□□□□ 0.47
CHRNA1-203ENST00000409219 RFC4P35249 363 aa17.98■□□□□ 0.47
CHRNA1-203ENST00000409219 SMC1BQ8NDV3 1235 aa17.98■□□□□ 0.47
CHRNA1-203ENST00000409219 RPS6KA4O75676 772 aa17.97■□□□□ 0.47
CHRNA1-203ENST00000409219 DALRD3Q5D0E6 543 aaKnown RBP17.97■□□□□ 0.47
CHRNA1-203ENST00000409219 RBM42Q9BTD8 480 aaKnown RBP17.97■□□□□ 0.47
CHRNA1-203ENST00000409219 PPM1GO15355 546 aaPredicted RBP17.96■□□□□ 0.47
CHRNA1-203ENST00000409219 HSPA1AP0DMV8 641 aaKnown RBP17.96■□□□□ 0.47
CHRNA1-203ENST00000409219 HSPA1BP0DMV9 641 aaKnown RBP17.96■□□□□ 0.47
CHRNA1-203ENST00000409219 WASHC2AQ641Q2 1341 aa17.96■□□□□ 0.47
CHRNA1-203ENST00000409219 ADAMTS7Q9UKP4 1686 aa17.95■□□□□ 0.46
CHRNA1-203ENST00000409219 TIAM2Q8IVF5 1701 aa17.95■□□□□ 0.46
CHRNA1-203ENST00000409219 DDR1Q08345 913 aa17.95■□□□□ 0.46
CHRNA1-203ENST00000409219 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
CHRNA1-203ENST00000409219 TJP1Q07157 1748 aa17.94■□□□□ 0.46
CHRNA1-203ENST00000409219 CHRNA5P30532 468 aa17.94■□□□□ 0.46
CHRNA1-203ENST00000409219 CARD14Q9BXL6 1004 aa17.94■□□□□ 0.46
CHRNA1-203ENST00000409219 RASSF7Q02833 373 aa17.93■□□□□ 0.46
CHRNA1-203ENST00000409219 SRP68Q9UHB9 627 aaKnown RBP17.93■□□□□ 0.46
CHRNA1-203ENST00000409219 USP42Q9H9J4 1324 aaKnown RBP17.93■□□□□ 0.46
CHRNA1-203ENST00000409219 ERVV-2B6SEH9 535 aa17.92■□□□□ 0.46
CHRNA1-203ENST00000409219 FKBP8Q14318 412 aa17.92■□□□□ 0.46
CHRNA1-203ENST00000409219 ZC3H4Q9UPT8 1303 aaKnown RBP17.92■□□□□ 0.46
CHRNA1-203ENST00000409219 DLEC1Q9Y238 1755 aa17.91■□□□□ 0.46
CHRNA1-203ENST00000409219 AFDNP55196 1824 aaKnown RBP17.9■□□□□ 0.46
CHRNA1-203ENST00000409219 CRKLP46109 303 aaKnown RBP17.89■□□□□ 0.45
CHRNA1-203ENST00000409219 CCDC88AQ3V6T2 1871 aa17.89■□□□□ 0.45
CHRNA1-203ENST00000409219 POLRMTO00411 1230 aaKnown RBP17.88■□□□□ 0.45
CHRNA1-203ENST00000409219 EIF4A2Q14240 407 aaKnown RBP17.88■□□□□ 0.45
CHRNA1-203ENST00000409219 NRXN2Q9P2S2 1712 aa17.88■□□□□ 0.45
CHRNA1-203ENST00000409219 VEGFAP15692 232 aaPredicted RBP17.88■□□□□ 0.45
CHRNA1-203ENST00000409219 POLKQ9UBT6 870 aa17.88■□□□□ 0.45
CHRNA1-203ENST00000409219 GLTPD2A6NH11 291 aa17.87■□□□□ 0.45
CHRNA1-203ENST00000409219 PTCD1O75127 700 aaKnown RBP17.87■□□□□ 0.45
CHRNA1-203ENST00000409219 HSP90AB1P08238 724 aaKnown RBP17.86■□□□□ 0.45
CHRNA1-203ENST00000409219 CABP4P57796 275 aa17.86■□□□□ 0.45
CHRNA1-203ENST00000409219 LMNB1P20700 586 aa17.85■□□□□ 0.45
CHRNA1-203ENST00000409219 TM4SF1P30408 202 aa17.85■□□□□ 0.45
CHRNA1-203ENST00000409219 CDCA8Q53HL2 280 aa17.84■□□□□ 0.45
CHRNA1-203ENST00000409219 ZNF530Q6P9A1 599 aaPredicted RBP17.83■□□□□ 0.45
CHRNA1-203ENST00000409219 INTS5Q6P9B9 1019 aaKnown RBP17.82■□□□□ 0.44
CHRNA1-203ENST00000409219 SCN11AQ9UI33 1791 aa17.82■□□□□ 0.44
CHRNA1-203ENST00000409219 POTECB2RU33 542 aa17.82■□□□□ 0.44
CHRNA1-203ENST00000409219 NFKBIEO00221 500 aa17.81■□□□□ 0.44
CHRNA1-203ENST00000409219 PLEKHO1Q53GL0 409 aaPredicted RBP17.81■□□□□ 0.44
CHRNA1-203ENST00000409219 USPL1Q5W0Q7 1092 aa17.81■□□□□ 0.44
CHRNA1-203ENST00000409219 DICER1Q9UPY3 1922 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms