RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 SPTY2D1Q68D10 685 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-203ENST00000409101 SCLT1Q96NL6 688 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 DBF4Q9UBU7 674 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-203ENST00000409101 WDR97A6NE52 1622 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 DDX11L8A8MPP1 907 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 GSTO1P78417 241 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 DCTN1Q14203 1278 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 ZNF772Q68DY9 489 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-203ENST00000409101 TBX22Q9Y458 520 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.98□□□□□ -1.45
SCN3A-203ENST00000409101 SPDYE4A6NLX3 237 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 LDHCP07864 332 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 MAP3K12Q12852 859 aa5.98□□□□□ -1.45
SCN3A-203ENST00000409101 IPO7O95373 1038 aaKnown RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 APBA3O96018 575 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 MATR3P43243 847 aaKnown RBP eCLIP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 CCDC73Q6ZRK6 1079 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 MPHOSPH6Q99547 160 aaKnown RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 CABP5Q9NP86 173 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 BCAR3O75815 825 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 PAF1Q8N7H5 531 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 TMEM87AQ8NBN3 555 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 RBM17Q96I25 401 aaKnown RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 FEZ1Q99689 392 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 SEC63Q9UGP8 760 aaKnown RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 HLA-DOAP06340 250 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 EHMT1Q9H9B1 1298 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 CCNL1Q9UK58 526 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 ANKRD36BQ8N2N9 1353 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 C11orf95C9JLR9 678 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 ATP2B1P20020 1258 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 FAM98CQ17RN3 349 aaKnown RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 CUL5Q93034 780 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 UTP14AQ9BVJ6 771 aaKnown RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 CCDC96Q2M329 555 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 DNAAF4Q8WXU2 420 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 SIRT1Q96EB6 747 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 NAP1L5Q96NT1 182 aaPredicted RBP5.97□□□□□ -1.45
SCN3A-203ENST00000409101 SLAIN2Q9P270 581 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 WWC3Q9ULE0 1092 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 NEO1Q92859 1461 aa5.97□□□□□ -1.45
SCN3A-203ENST00000409101 OLFM4Q6UX06 510 aa5.96□□□□□ -1.45
SCN3A-203ENST00000409101 ANKRD18AQ8IVF6 992 aa5.96□□□□□ -1.45
SCN3A-203ENST00000409101 ZNF444Q8N0Y2 327 aaPredicted RBP5.96□□□□□ -1.45
SCN3A-203ENST00000409101 OGFOD1Q8N543 542 aa5.96□□□□□ -1.45
SCN3A-203ENST00000409101 IMMTQ16891 758 aaKnown RBP5.96□□□□□ -1.45
SCN3A-203ENST00000409101 PPP4R3AQ6IN85 833 aa5.96□□□□□ -1.45
SCN3A-203ENST00000409101 NLRP3Q96P20 1036 aa5.96□□□□□ -1.45
SCN3A-203ENST00000409101 NOL7Q9UMY1 257 aaKnown RBP5.96□□□□□ -1.45
SCN3A-203ENST00000409101 MAP3K2Q9Y2U5 619 aa5.96□□□□□ -1.45
SCN3A-203ENST00000409101 GNPATO15228 680 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 BAG3O95817 575 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 THUMPD2Q9BTF0 503 aaKnown RBP5.96□□□□□ -1.46
SCN3A-203ENST00000409101 NIP7Q9Y221 180 aaKnown RBP eCLIP5.96□□□□□ -1.46
SCN3A-203ENST00000409101 ARHGEF10O15013 1369 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 RAB11FIP3O75154 756 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 CDKL5O76039 1030 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 AKAP4Q5JQC9 854 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 ZNF804AQ7Z570 1209 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 TRIM21P19474 475 aaKnown RBP5.96□□□□□ -1.46
SCN3A-203ENST00000409101 TPTE2Q6XPS3 522 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 EYA3Q99504 573 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 ABCC11Q96J66 1382 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 RXRBP28702 533 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 ANKRD1Q15327 319 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 BEGAINQ9BUH8 593 aa5.96□□□□□ -1.46
SCN3A-203ENST00000409101 MINDY4BA8MYZ0 360 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 DZIP3Q86Y13 1208 aaKnown RBP5.95□□□□□ -1.46
SCN3A-203ENST00000409101 ZNF396Q96N95 335 aaPredicted RBP5.95□□□□□ -1.46
SCN3A-203ENST00000409101 NPATQ14207 1427 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 CCDC70Q6NSX1 233 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 DNAI2Q9GZS0 605 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 ZHX3Q9H4I2 956 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 CYP46A1Q9Y6A2 500 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 ABCC1P33527 1531 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 GPR162Q16538 588 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 ZFYVE27Q5T4F4 411 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 CCDC87Q9NVE4 849 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 ATP7AQ04656 1500 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 GOLGA6L3A6NEY3 463 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 TTF1Q15361 905 aaPredicted RBP5.95□□□□□ -1.46
SCN3A-203ENST00000409101 RBM26Q5T8P6 1007 aaKnown RBP5.95□□□□□ -1.46
SCN3A-203ENST00000409101 SASS6Q6UVJ0 657 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 WASF1Q92558 559 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 CDCA7LQ96GN5 454 aa5.95□□□□□ -1.46
SCN3A-203ENST00000409101 ATP5J2-PTCD1G3V325 749 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 GCP02774 474 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 SYCP1Q15431 976 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 SKOR2Q2VWA4 1001 aaPredicted RBP5.94□□□□□ -1.46
SCN3A-203ENST00000409101 NUTM1Q86Y26 1132 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 RPAP2Q8IXW5 612 aaPredicted RBP5.94□□□□□ -1.46
SCN3A-203ENST00000409101 ZGPATQ8N5A5 531 aaKnown RBP5.94□□□□□ -1.46
SCN3A-203ENST00000409101 PIBF1Q8WXW3 757 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 GJA3Q9Y6H8 435 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 ABCA5Q8WWZ7 1642 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 PDE3AQ14432 1141 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 IL1RAPL2Q9NP60 686 aa5.94□□□□□ -1.46
SCN3A-203ENST00000409101 MAGEC2Q9UBF1 373 aaPredicted RBP5.94□□□□□ -1.46
SCN3A-203ENST00000409101 NAP1L1P55209 391 aaKnown RBP5.94□□□□□ -1.46
SCN3A-203ENST00000409101 MVPQ14764 893 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms